Bacillus natronophilus sp. nov., an alkaliphilic bacterium isolated from a soda lake

An alkaliphilic, moderately halophilic, heterotrophic, rod-shaped, spore-forming bacterium (M30T) was isolated from a sediment sample collected from a soda lake (Lake Magadi, Tanzania). Strain M30T was strictly aerobic, catalase-positive, oxidase-negative and non-motile. Growth occurred at 12–43 °C (optimum, 25–30 °C), at pH 8.0–12 (optimum, pH 9.5–10) and at salinities of 0.5–15 % (w/v) NaCl (optimum 5 %). It utilized various sugars and organic acids as sole carbon sources and was positive for amylase, cellulase, gelatinase, protease and xylanase activities. The cell-wall peptidoglycan contained meso-diaminopimelic acid and the polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, one unidentified lipid and one unidentified phospholipid. The DNA G+C content was 48.9 mol%. The predominant menaquinone was MK-7 and the major fatty acids (>10 %) comprised anteiso-C15 : 0, iso-C15 : 0, and anteiso-C17 : 0. Phylogenetic analysis based on 16S rRNA gene sequence affiliated M30T to the genus Bacillus and showed the highest similarities to Bacillus populi FJAT-45347T (96.4 %) and Bacillus aurantiacus K1-5T (96.2 %). Based on the data from the current polyphasic study, M30T represents a novel species of the genus Bacillus , for which the name Bacillus natronophilus sp. nov. is proposed. The type strain is M30T (=JCM 32118T=CGMCC 1.16739T=MCC 3010T)

Discriminating sources and preservation of organic matter in surface sediments from five Antarctic lakes in the Fildes Peninsula (King George Island) by lipid biomarkers and compound-specific isotopic analysis

Lakes are important paleoenvironmental archives retaining abundant information due to their typical high sedimentation rates and susceptibility to environmental changes. Here, we scrutinize the organic matter (OM) composition, origin and preservation state in surface sediments from five lakes in a remote, warming-sensitive, and poorly explored region partially covered by the retreating Collins Glacier in King George Island (Antarctica), the Fildes Peninsula. Lipid biomarkers of terrestrial origin (i.e. high-molecularweight n-alkanes, n-alkanoic acids, and n-alkanols; β-sitosterol, campesterol, and stigmasterol) were detected in the five Fildes Lakes, with the smallest basin (i.e.,Meltwater) showing a particularly strongmoss imprint. Aquatic source indicators such as lowC/N and terrestrial over aquatic ratios (TAR), or less negative δ13C valueswere preferentially found in themid-sized lakes (i.e., Drake and Ionospheric). Sedimentary carbon in the larger lakes (i.e., Uruguay and Kitezh) displayed a largely biogenic origin (i.e., values of carbon preference index, CPI, ≫1), whereas the three lakes close to Collins Glacier (i.e., Drake, Meltwater, and Ionospheric) showed certain contribution from petrogenic sources (CPI ~ 1). The results suggest that the geochemical signature of the surface sediments in the five Fildes lakes is determined by factors such as the distance to the retreating Collins Glacier, the proximity to the coast, or the lake depth. This study illustrates the forensic interest of combining lipid biomarkers, compound-specific isotopic analysis, and bulk geochemistry to reconstruct paleoenvironments and study climate-sensitive regions

Hymenobacter artigasi sp. nov., isolated from air sampling in maritime Antarctica

A rod-shaped and Gram-stain-negative bacterial strain, 1BT, was isolated from an air sample collected at King George Island, maritime Antarctica. Strain 1BT is strictly aerobic, psychrophilic, catalase-positive, oxidase-positive and non-motile. Growth of strain 1BT is observed at 0–20 °C (optimum, 10 °C), pH 6.0–8.0 (optimum, pH 8.0) and in the presence of 0–1.0% NaCl (optimum, 0.5 % NaCl). Phylogenetic analysis based on 16S rRNA gene sequences places strain 1BT within the genus Hymenobacter and shows the highest similarity to Hymenobacter antarcticus VUG-A42aaT (97.5 %). The predominant menaquinone of strain 1BT is MK-7 and the major fatty acids (>10 %) comprise summed feature 3 (C16 : 1  ω7c and/or C16 : 1  ω6c; 32.5 %), iso-C15 : 0 (17.6 %) and anteiso C15 : 0 (12.3 %). The polar lipid profile consists of the major compounds phosphatidylethanolamine, phosphatidylserine, two unidentified aminolipids and one unidentified phospholipid. The DNA G+C content based on the draft genome sequence is 61.2 mol%. Based on the data from the current polyphasic study, 1BT represents a novel species of the genus Hymenobacter , for which the name Hymenobacter artigasi sp. nov. is suggested. The type strain is 1BT (=CCM 8970T=CGMCC 1.16843T)