Doubly magic nuclei from Lattice QCD forces at MPS=M_{PS}=469 MeV/c2^2

We perform ab initio self-consistent Green's function calculations of the closed shell nuclei $^{\rm 4}$He, $^{\rm 16}$O and $^{\rm 40}$Ca, based on two-nucleon potentials derived from Lattice QCD simulations, in the flavor SU(3) limit and at the pseudo-scalar meson mass of 469~MeV/c$^{\rm 2}$. The nucleon-nucleon interaction is obtained using the HAL QCD method and its short-distance repulsion is treated by means of ladder resummations outside the model space. Our results show that this approach diagonalises ultraviolet degrees of freedom correctly. Therefore, ground state energies can be obtained from infrared extrapolations even for the relatively hard potentials of HAL QCD. Comparing to previous Brueckner Hartree-Fock calculations, the total binding energies are sensibly improved by the full account of many-body correlations. The results suggest an interesting possible behaviour in which nuclei are unbound at very large pion masses and islands of stability appear at first around the traditional doubly-magic numbers when the pion mass is lowered toward its physical value. The calculated one-nucleon spectral distributions are qualitatively close to those of real nuclei even for the pseudo-scalar meson mass considered here.Comment: 7 pages, 4 figures, RIKEN-QHP-286, RIKEN-iTHEMS-Report-1

Engineering the Cambrian explosion: the earliest bioturbators as ecosystem engineers

By applying modern biological criteria to trace fossil types and assessing burrow morphology, complexity, depth, potential burrow function and the likelihood of bioirrigation, we assign ecosystem engineering impact (EEI) values to the key ichnotaxa in the lowermost Cambrian (Fortunian). Surface traces such as Monomorphichnus have minimal impact on sediment properties and have very low EEI values; quasi-infaunal traces of organisms that were surficial modifiers or biodiffusors, such as Planolites, have moderate EEI values; and deeper infaunal, gallery biodiffusive or upward-conveying/downward-conveying traces, such as Teichichnus and Gyrolithes, have the highest EEI values. The key Cambrian ichnotaxon Treptichnus pedum has a moderate to high EEI value, depending on its functional interpretation. Most of the major functional groups of modern bioturbators are found to have evolved during the earliest Cambrian, including burrow types that are highly likely to have been bioirrigated. In fine-grained (or microbially bound) sedimentary environments, trace-makers of bioirrigated burrows would have had a particularly significant impact, generating advective fluid flow within the sediment for the first time, in marked contrast with the otherwise diffusive porewater systems of the Proterozoic. This innovation is likely to have created significant ecospace and engineered fundamentally new infaunal environments for macrobiotic and microbiotic organisms alike

Contributions of Professor Martin Brasier to the study of early life, stratigraphy and biogeochemistry

Publisher PD

Parallel String Sample Sort

We discuss how string sorting algorithms can be parallelized on modern multi-core shared memory machines. As a synthesis of the best sequential string sorting algorithms and successful parallel sorting algorithms for atomic objects, we propose string sample sort. The algorithm makes effective use of the memory hierarchy, uses additional word level parallelism, and largely avoids branch mispredictions. Additionally, we parallelize variants of multikey quicksort and radix sort that are also useful in certain situations.Comment: 34 pages, 7 figures and 12 table

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Even faster sorting of (not only) integers

In this paper we introduce RADULS2, the fastest parallel sorter based on radix algorithm. It is optimized to process huge amounts of data making use of modern multicore CPUs. The main novelties include: extremely optimized algorithm for handling tiny arrays (up to about a hundred of records) that could appear even billions times as subproblems to handle and improved processing of larger subarrays with better use of non-temporal memory stores

Do functional walk tests reflect cardiorespiratory fitness in sub-acute stroke?

BACKGROUND AND PURPOSE: The Six-Minute Walk Test (6MWT) has been employed as a measure of functional capacity, but its relationship to cardiorespiratory fitness in stroke is not well established. Gait speed measured over short distances is commonly used as an index of walking competency following stroke. We evaluated the relationship between the 6MWT, aerobic fitness (VO(2)peak) and walking competency in sub-acute stroke. METHODS: Thirty-six individuals (mean age ± SD, 64.6 ± 14.4 years; time post-stroke 16.2 ± 13.3 days) were evaluated using the 6MWT (distance, speed, heart rate), a maximal exercise test (VO(2)peak, heart rate, exercise test duration), and walking competency using a five meter walk (speed, symmetry ratio). Correlation analyses were used to examine the relationships between these outcomes. RESULTS: There was a strong correlation between the 6MWT and five meter walk velocity for preferred (r = 0.79) and fast (r = 0.82) speed (p < 0.001). On average, the 6MWT speed was faster than the preferred gait speed (94.9 cm/s vs. 83.8 cm/s, p = 0.003), but slower than the fast-paced walk (115.1 cm/s, p < 0.001). There was significant though more moderate association between 6MWT distance and VO(2)peak (r = 0.56, p < 0.001) and exercise test duration (r = 0.60, p < 0.001). CONCLUSION: The speed selected during the 6MWT was strongly related to the velocities selected during the five meter walk distance (intermediate to the selected preferred and fast speeds). Although the 6MWT may be challenging to the cardiorespiratory system, it appears to be more strongly influenced by potential limits to walking speed rather than cardiorespiratory capacity. As a result, this test is not, by itself, an adequate measure of aerobic fitness early after stroke

Strong correlation effects of the Re 5dd electrons on the metal-insulator transition in Ca2_2FeReO6_6

We have investigated the electronic structure of polycrystalline Ca$_2$FeReO$_6$ using photoemission spectroscopy and band-structure calculations within the local-density approximation+$U$ (LDA+$U$) scheme. In valence-band photoemission spectra, a double-peak structure which is characteristic of the metallic double perovskite series has been observed near the Fermi level ($E_{\rm F}$), although it is less distinct compared to the Sr$_2$FeMoO$_6$ case. The leading near-$E_{\rm F}$ structure has a very weak spectral weight at $E_{\rm F}$ above the metal-insulator transition (MIT) temperature $T_{\rm MI}$ of $\sim$140 K, and it loses the $E_{\rm F}$ weight below $T_{\rm MI}$, forming a small energy gap. To reproduce this small energy gap in the calculation, we require a very large effective $U$ ($U_{\rm eff}$) for Re (4 eV) in addition to a relatively large $U_{\rm eff}$ for Fe (4 eV). Although the most of the experimental features can be interpreted with the help of the band theory, the overall agreement between the theory and the experiment was not satisfactory. We demonstrate that the effective transfer integral between Fe and Re is actually smaller than that between Fe and Mo in Ca$_2$FeMoO$_6$, which can explain both MIT and very high ferrimagnetic transition temperature.Comment: 7 pages text, 5 figures, to be pulished in Phys. Rev.

Towards a software product line of trie-based collections

Collection data structures in standard libraries of programming languages are designed to excel for the average case by carefully balancing memory footprint and runtime performance. These implicit design decisions and hard-coded trade-offs do constrain users from using an optimal variant for a given problem. Although a wide range of specialized collections is available for the Java Virtual Machine (JVM), they introduce yet another dependency and complicate user adoption by requiring specific Application Program Interfaces (APIs) incompatible with the standard library. A product line for collection data structures would relieve library designers from optimizing for the general case. Furthermore, a product line allows evolving the potentially large code base of a collection family efficiently. The challenge is to find a small core framework for collection data structures which covers all variations without exhaustively listing them, while supporting good performance at the same time. We claim that the concept of Array Mapped Tries (AMTs) embodies a high degree of commonality in the sub-domain of immutable collection data structures. AMTs are flexible enough to cover most of the variability, while minimizing code bloat in the generator and the generated code. We implemented a Data Structure Code Generator (DSCG) that emits immutable collections based on an AMT skeleton foundation. The generated data structures outperform competitive handoptimized implementations, and the generator still allows for customization towards specific workloads