Predominant variable region gene usage by gamma/delta T cell receptor-bearing cells in the adult thymus.

Previous studies have indicated that the diversity of gamma genes expressed by gamma/delta-bearing murine T cells is limited, but comparable information concerning the expressed diversity of delta genes is lacking. In this study, we have investigated the rearrangement and expression of delta and gamma genes in T cell hybridomas that express gamma/delta T cell receptors. Three productive delta chain cDNA clones were isolated (delta 7.3, delta 7.1, and delta 2.3) that encode new variable region sequences. Two of the delta cDNAs differ significantly from those observed in the V alpha repertoire. In addition, one cDNA expressed a new J delta region (J delta 2), which was localized between J delta 1 and C delta genes. Using these and other delta gene probes and gamma gene probes, we found that five independent hybridomas expressed four different V delta s and three different V gamma s. However, analysis of an enriched population of gamma/delta-expressing cells from the adult thymus suggests that only a few V delta genes and one V gamma gene are used by the majority of the cells. These results suggest that important components of receptor chain that contribute to specificity (i.e., the germline V gene sequences) are relatively nondiverse in the thymic gamma/delta population

Numerical modelling for earthquake engineering: the case of lightly RC structural walls

Different types of numerical models exist to describe the non‐linear behaviour of reinforced concrete structures. Based on the level of discretization they are often classified as refined or simplified ones. The efficiency of two simplified models using beam elements and damage mechanics in describing the global and local behaviour of lightly reinforced concrete structural walls subjected to seismic loadings is investigated in this paper. The first model uses an implicit and the second an explicit numerical scheme. For each case, the results of the CAMUS 2000 experimental programme are used to validate the approaches

Coriolis effect on centrifugal buoyancy-driven convection in a thin cylindrical shell

We study the effect of the Coriolis force on centrifugal buoyancy-driven convection in a rotating cylindrical shell with inner cold wall and outer hot wall. This is done by performing direct numerical simulations for increasing inverse Rossby number Ro−1 from zero (no Coriolis force) to 20 (very large Coriolis force) and for Rayleigh number Ra from 107 to 1010 and Prandtl number Pr=0.7, corresponding to air. We invoke the thin-shell limit, which neglects the curvature and radial variations of the centripetal acceleration. As Ro−1 increases from zero, the system forms an azimuthal bidirectional wind that reaches its maximum momentum at an optimal Ro−1opt, associated with a maximal skin-friction coefficient Cf and a minimal Nusselt number Nu. Just beyond Ro−1opt, the wind weakens and an axial, quasi-two-dimensional cyclone, corotating with the system, begins to form. A local ‘turbulence’ inverse Rossby number (non-dimensionalised by the eddy turnover time) determines the onset of cyclone formation for all Ra, when its value reaches approximately 4. At Ro−1≫Ro−1opt, the system falls into the geostrophic regime with a sudden drop in Nu. The bidirectional wind for Ro−1≤Ro−1opt is a feature of this system, as it hastens the boundary layer transition from laminar to turbulent, towards the ultimate regime. We see the onset of this transition at Ra=1010 and Ro−1≃Ro−1opt, although the mean flow profile has not yet fully collapsed on the Prandtl–von Kármán (logarithmic) law

When the optimal is not the best: parameter estimation in complex biological models

Background: The vast computational resources that became available during the past decade enabled the development and simulation of increasingly complex mathematical models of cancer growth. These models typically involve many free parameters whose determination is a substantial obstacle to model development. Direct measurement of biochemical parameters in vivo is often difficult and sometimes impracticable, while fitting them under data-poor conditions may result in biologically implausible values. Results: We discuss different methodological approaches to estimate parameters in complex biological models. We make use of the high computational power of the Blue Gene technology to perform an extensive study of the parameter space in a model of avascular tumor growth. We explicitly show that the landscape of the cost function used to optimize the model to the data has a very rugged surface in parameter space. This cost function has many local minima with unrealistic solutions, including the global minimum corresponding to the best fit. Conclusions: The case studied in this paper shows one example in which model parameters that optimally fit the data are not necessarily the best ones from a biological point of view. To avoid force-fitting a model to a dataset, we propose that the best model parameters should be found by choosing, among suboptimal parameters, those that match criteria other than the ones used to fit the model. We also conclude that the model, data and optimization approach form a new complex system, and point to the need of a theory that addresses this problem more generally

High energy Coulomb-scattered electrons for relativistic particle beam diagnostics

A new system used for monitoring energetic Coulomb-scattered electrons as the main diagnostic for accurately aligning the electron and ion beams in the new Relativistic Heavy Ion Collider (RHIC) electron lenses is described in detail. The theory of electron scattering from relativistic ions is developed and applied to the design and implementation of the system used to achieve and maintain the alignment. Commissioning with gold and 3He beams is then described as well as the successful utilization of the new system during the 2015 RHIC polarized proton run. Systematic errors of the new method are then estimated. Finally, some possible future applications of Coulomb-scattered electrons for beam diagnostics are briefly discussed.Comment: 16 pages, 23 figure

‘The International Teacher Leadership project,’ a case of international action research.

Copyright CARNThe paper arises from the International Teacher Leadership project, a research and development project involving researchers and practitioners in 14 European countries. The paper provides a conceptual exploration of the idea of teacher leadership and its role in educational reform, central to which is the idea that teachers, regardless of their level of power and organisational position, can engage in the leadership of enquiry-based development activity aimed at influencing their colleagues and embedding improved practices in their schools. The paper provides an outline of the project’s methodology which builds on that used in the Carpe Vitam Leadership for Learning project (Frost, 2008a). It is a form of collaborative action research which is highly developmental and discursive. It seeks to identify principles, strategies and tools that can be applied in a range of cultural settings. The paper includes a thematic analysis of the cultural contexts and policy environments of the participating countries in order to identify the obstacles to teacher leadership and to inform the nature of the support strategies employed