Genetic relationships of Caribbean lowland spiny pocket mice (Heteromys desmarestianus: Rodentia; Heteromyidae): evidence of a distinct mitochondrial lineage

Genetic studies provide important insights into the evolutionary history and taxonomy of species, allowing us to identify lineages dif-ficult to distinguish morphologically. The relationships among species in the genus Heteromys have been in flux as new species have been described, and candidate species have been suggested in the H. desmarestianus group. One new potential species may be in Costa Rica’s Carib-bean lowlands. Herein, we test the phylogenetic relationships of individuals from Costa Rica’s Caribbean lowlands to individuals from through-out the species’ range using mitochondrial sequences from cytochrome-b (cytb). We captured 116 individuals from the lowlands, sequenced their cytb gene, and incorporated 74 GenBank sequences from throughout the species’ range to test if individuals from Costa Rica’s Caribbean lowlands potentially constitute an undescribed species. Our results document a distinct mitochondrial lineage in the Caribbean lowlands of Costa Rica. Our results from extensive sampling within the lowlands show a unique mitochondrial DNA lineage, which suggests the presence of an undescribed species. The Caribbean lowlands of Costa Rica may hold other cryptic diversity, and further phylogenetic studies should incorporate samples from this area, as it may have a unique evolutionary history. Los estudios genéticos proporcionan información importante sobre la historia evolutiva y la taxonomía de las especies, lo que nos permite identificar linajes difíciles de distinguir morfológicamente. Las relaciones filogenéticas entre las especies del género Heteromys han estado cambiando a medida que se han descrito nuevas especies y se han sugerido especies candidatas en el grupo H. desmarestianus. Una nueva especie potencial podría encontrarse en las tierras bajas del Caribe de Costa Rica. En este trabajo analizamos las relaciones filogenéticas entre individuos de las tierras bajas del Caribe de Costa Rica con individuos de todo el rango de la especie utilizando secuencias mitocondriales del citocromo-b (cytb). Capturamos 116 individuos de las tierras bajas, secuenciamos su gen cytb e incorporamos 74 secuencias GenBank de todo el área de distribución de la especie para probar si los individuos de las tierras bajas del Caribe de Costa Rica constituyen potencialmente una especie no descrita. Nuestros resultados indican la presencia de un linaje distinto basado en el ADN mitocondrial, que sugiere que los indivi-duos de las tierras bajas del Caribe de Costa Rica probablemente son una especie distinta. Las tierras bajas del Caribe de Costa Rica pueden tener una diversidad críptica significativa. Por ello sugerimos que estudios filogenéticos adicionales deberían incorporar muestras de esta área, ya que puede tener una historia evolutiva única

Variación morfológica y distribución geográfica de Schizopetalon arcuatum Al-Shehbaz (Brassicaceae), una especie endémica y críptica de la Región de Atacama, Chile

La presente nota ofrece una revisión de la distribución geográfica y variación morfológica de Schizopetalon arcuatum, dado que ambas variables han generado confusión en la identificación de esta especie críptica. Se espera que la información presentada ayude a resolver este problema en relación a sus especies vecinas o cercanamente relacionadas

A Test of Baker’s Law: Breeding Systems and the Radiation of Tolpis (Asteraceae) in the Canary Islands

Baker’s law posits that self‐compatible (SC) plants will be more successful than self‐incompatible (SI) plants in long‐distance colonization because a single propagule can establish a viable population. Oceanic islands represent ideal systems to test Baker’s law because insular lineages have, without question, originated from long‐distance dispersal. The dilemma of Baker’s law is that one propagule of an SC plant would establish a population with low genetic diversity, which could limit subsequent evolution. By contrast, a single propagule from an SI ancestor, having originated from an outcrossing source population, would provide more diversity but could not undergo sexual reproduction. We examined this issue by studying the breeding system of members of the flowering plant genus Tolpis (Asteraceae), a small (nine to 13 species), monophyletic lineage in the Canary Islands archipelago. A combination of floral morphology, pollen‐ovule ratio, autogamous seed set, and genetic data indicates that only one endemic species (T. coronopifolia) is effectively SC. The remainder of the endemics are pseudo‐self‐compatible, i.e., are largely SI but capable of low levels of seed set from self‐fertilization. Pseudo‐self‐compatibility remedies the dilemma of Baker’s law: a single propagule can establish a sexual population and yet have sufficient variation to facilitate diversification

The Genetics of Self-Compatibility and Associated Floral Characters in Tolpis (Asteraceae) in the Canary Islands

This is the publisher's version, also available electronically from http://www.jstor.org/stable/10.1086/668788.Members of the genus Tolpis (Asteraceae) endemic to the Canary Islands comprise a monophyletic group with the dispersal of one species to the Cape Verde Islands. Most species are self-incompatible or pseudo-self-compatible perennials. However, one species, Tolpis coronopifolia, consists of self-compatible annual plants with several floral features typical of the selfing syndrome. The evolution of self-compatibility and the selfing syndrome was studied by producing synthetic hybrids between self-incompatible/pseudo-self-compatible and self-compatible plants to determine the genetic architecture of breeding system and floral trait differences. There was a correlation between self-compatibility and selfing floral traits in the F2 generation. Self-incompatibility in Tolpis appears to be controlled by a locus of major effect but with modifier loci affecting seed set. Segregation of floral traits indicates that they are controlled by multiple loci. The high molecular similarity between plants with the two breeding systems suggests that divergence of the self-compatible T. coronopifolia from self-incompatible/pseudo-self-compatible ancestors has been recent. The association between breeding system and floral features likely results from pleiotropy or close linkage and may have facilitated the rapid evolution of the morphologically distinct self-compatible T. coronopifolia

Molecular phylogeny of Nassauvia (Asteraceae, Mutisieae) based on nrDNA ITS sequences

The phylogeny of the genus Nassauvia and closely related genera was reconstructed using sequences from the internal transcribed spacer regions (ITS) of nuclear ribosomal DNA. The genus Triptilion is nested within Nassauvia, making the latter genus paraphyletic. Neither of the two subgenera Nassauvia and Strongyloma is resolved as monophyletic, and none of the sections of subgenus Nassauvia is recovered as monophyletic. The evolution of the compound secondary inflorescences has been complex in Nassauvia, with the highly aggregated forms representing the original condition in the genus. However, the ancestral condition is equivocal in several clades, and there are alternative reconstructions for the gains?losses of the variously aggregated conditions. There has been at least one gain of solitary capitula in Nassauvia. The evolution of flavonoid chemistry has been complex in Nassauvia, and flavonoids are of limited phylogenetictaxonomic utility in the genus. Gains?losses of flavonols occur only on terminals whereas changes in flavones and C-glycosyl flavones occur at various levels in the tree. Gains?losses of methylation of flavones and flavonols occur only on terminals.Nassauvia and closely related genera was reconstructed using sequences from the internal transcribed spacer regions (ITS) of nuclear ribosomal DNA. The genus Triptilion is nested within Nassauvia, making the latter genus paraphyletic. Neither of the two subgenera Nassauvia and Strongyloma is resolved as monophyletic, and none of the sections of subgenus Nassauvia is recovered as monophyletic. The evolution of the compound secondary inflorescences has been complex in Nassauvia, with the highly aggregated forms representing the original condition in the genus. However, the ancestral condition is equivocal in several clades, and there are alternative reconstructions for the gains?losses of the variously aggregated conditions. There has been at least one gain of solitary capitula in Nassauvia. The evolution of flavonoid chemistry has been complex in Nassauvia, and flavonoids are of limited phylogenetictaxonomic utility in the genus. Gains?losses of flavonols occur only on terminals whereas changes in flavones and C-glycosyl flavones occur at various levels in the tree. Gains?losses of methylation of flavones and flavonols occur only on terminals.Fil: Maraner, Fabrizio. Universidad de Viena; AustriaFil: Samuel, Rosabelle. Universidad de Viena; AustriaFil: Stuessy, Tod F.. Universidad de Viena; AustriaFil: Crawford, Daniel J.. University of Kansas; Estados UnidosFil: Crisci, Jorge Victor. Universidad Nacional de La Plata. Facultad de Ciencias Naturales y Museo. División de Plantas Vasculares; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - La Plata; ArgentinaFil: Pandey, A.. University Of Delhi; IndiaFil: Mort, Mark E.. University of Kansas; Estados Unido

Rates of niche and phenotype evolution lag behind diversification in a temperate radiation

This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.Environmental change can create opportunities for increased rates of lineage diversification, but continued species accumulation has been hypothesized to lead to slowdowns via competitive exclusion and niche partitioning. Such density-dependent models imply tight linkages between diversification and trait evolution, but there are plausible alternative models. Little is known about the association between diversification and key ecological and phenotypic traits at broad phylogenetic and spatial scales. Do trait evolutionary rates coincide with rates of diversification, are there lags among these rates, or is diversification niche-neutral? To address these questions, we combine a deeply sampled phylogeny for a major flowering plant clade—Saxifragales—with phenotype and niche data to examine temporal patterns of evolutionary rates. The considerable phenotypic and habitat diversity of Saxifragales is greatest in temperate biomes. Global expansion of these habitats since the mid-Miocene provided ecological opportunities that, with density-dependent adaptive radiation, should result in simultaneous rate increases for diversification, niche, and phenotype, followed by decreases with habitat saturation. Instead, we find that these rates have significantly different timings, with increases in diversification occurring at the mid-Miocene Climatic Optimum (∼15 Mya), followed by increases in niche and phenotypic evolutionary rates by ∼5 Mya; all rates increase exponentially to the present. We attribute this surprising lack of temporal coincidence to initial niche-neutral diversification followed by ecological and phenotypic divergence coincident with more extreme cold and dry habitats that proliferated into the Pleistocene. A lack of density-dependence contrasts with investigations of other cosmopolitan lineages, suggesting alternative patterns may be common in the diversification of temperate lineages

Multiplexed-shotgun-genotyping data resolve phylogeny within a very recently derived insular lineage

Premise of the study: Endemic plants on oceanic islands have long served as model systems for studying patterns and processes of evolution. However, phylogenetic studies of island plants frequently illustrate a decoupling of molecular divergence and ecological/morphological diversity, resulting in phylogenies lacking the resolution required to interpret patterns of evolution in a phylogenetic context. The current study uses the primarily Macaronesian fl owering plant genus Tolpis to illustrate the utility of multiplexed shotgun genotyping (MSG) for resolving relationships at relatively deep (among archipelagos) and very shallow (within archipelagos) nodes in this small, yet diverse insular plant lineage that had not been resolved with other molecular markers. • Methods: Genomic libraries for 27 accessions of Macaronesian Tolpis were generated for genotyping individuals using MSG, a form of reduced-representation sequencing, similar to restriction-site-associated DNA markers (RADseq). The resulting data fi les were processed using the program pyRAD, which clusters MSG loci within and between samples. Phylogenetic analyses of the aligned data matrix were conducted using RAxML. • Key results: Analysis of MSG data recovered a highly resolved phylogeny with generally strong support, including the fi rst robust inference of relationships within the highly diverse Canary Island clade of Tolpis . • Conclusions: The current study illustrates the utility of MSG data for resolving relationships in lineages that have undergone recent, rapid diversifi cation resulting in extensive ecological and morphological diversity. We suggest that a similar approach may prove generally useful for other rapid plant radiations where resolving phylogeny has been diffi cult.info:eu-repo/semantics/publishedVersio

How rapidly do self-compatible populations evolve selfing? Mating system estimation within recently evolved self-compatible populations of Azorean Tolpis succulenta (Asteraceae)

A grant from the One-University Open Access Fund at the University of Kansas was used to defray the author's publication fees in this Open Access journal. The Open Access Fund, administered by librarians from the KU, KU Law, and KUMC libraries, is made possible by contributions from the offices of KU Provost, KU Vice Chancellor for Research & Graduate Studies, and KUMC Vice Chancellor for Research. For more information about the Open Access Fund, please see http://library.kumc.edu/authors-fund.xml.Genome-wide genotyping and Bayesian inference method (BORICE) were employed to estimate outcrossing rates and paternity in two small plant populations of Tolpis succulenta (Asteraceae) on Graciosa island in the Azores. These two known extant populations of T. succulenta on Graciosa have recently evolved self-compatibility. Despite the expectation that selfing would occur at an appreciable rate (self-incompatible populations of the same species show low but nonzero selfing), high outcrossing was found in progeny arrays from maternal plants in both populations. This is inconsistent with an immediate transition to high selfing following the breakdown of a genetic incompatibility system. This finding is surprising given the small population sizes and the recent colonization of an island from self-incompatible colonists of T. succulenta from another island in the Azores, and a potential paucity of pollinators, all factors selecting for selfing through reproductive assurance. The self-compatible lineage(s) likely have high inbreeding depression (ID) that effectively halts the evolution of increased selfing, but this remains to be determined. Like their progeny, all maternal plants in both populations are fully outbred, which is consistent with but not proof of high ID. High multiple paternity was found in both populations, which may be due in part to the abundant pollinators observed during the flowering season

The potential role of hybridization in diversification and speciation in an insular plant lineage: insights from synthetic interspecific hybrids

Hybridization is recognized as an important process in plant evolution, and this may be particularly true for island plants where several biotic and abiotic factors facilitate interspecific hybridization. Although rarely done, experimental studies could provide insights into the potential of natural hybridization to generate diversity when species come into contact in the dynamic island setting. The potential of hybridization to generate morphological variation was analysed within and among 12 families (inbred lines) of an F4 hybrid generation between two species of Tolpis endemic to the Canary Islands. Combinations of characters not seen in the parents were present in hybrids. Several floral and vegetative characters were transgressive relative to their parents. Morphometric studies of floral, vegetative and fruit characters revealed that several F4 families were phenotypically distinct from other families, and from their parents. The study demonstrates that morphologically distinct pollen-fertile lines, potentially worthy of taxonomic recognition if occurring in nature, can be generated in four generations. The ability of the hybrid lines to set self-seed would reduce gene flow among the lines, and among the hybrids and their parental species. Selfing would also facilitate the fixation of characters within each of the lines. Overall, the results show the considerable potential of hybridization for generating diversity and distinct phenotypes in island lineages

Molecular phylogeny of <i>Nassauvia</i> (Asteraceae, Mutisieae) based on nrDNA ITS sequences

The phylogeny of the genus Nassauvia and closely related genera was reconstructed using sequences from the internal transcribed spacer regions (ITS) of nuclear ribosomal DNA. The genus Triptilion is nested within Nassauvia, making the latter genus paraphyletic. Neither of the two subgenera Nassauvia and Strongyloma is resolved as monophyletic, and none of the sections of subgenus Nassauvia is recovered as monophyletic. The evolution of the compound secondary inflorescences has been complex in Nassauvia, with the highly aggregated forms representing the original condition in the genus. However, the ancestral condition is equivocal in several clades, and there are alternative reconstructions for the gains–losses of the variously aggregated conditions. There has been at least one gain of solitary capitula in Nassauvia. The evolution of flavonoid chemistry has been complex in Nassauvia, and flavonoids are of limited phylogenetic-taxonomic utility in the genus. Gains–losses of flavonols occur only on terminals whereas changes in flavones and C-glycosyl flavones occur at various levels in the tree. Gains–losses of methylation of flavones and flavonols occur only on terminals.Facultad de Ciencias Naturales y Muse