Ranking factors affecting emissions of GHG from incubated agricultural soils

Agriculture significantly contributes to global greenhouse gas (GHG) missions and there is a need to develop effective mitigation strategies. The efficacy of methods to reduce GHG fluxes from agricultural soils can be affected by a range of interacting management and environmental factors. Uniquely, we used the Taguchi experimental design methodology to rank the relative importance of six factors known to affect the emission of GHG from soil: nitrate (NO3?) addition, carbon quality (labile and non-labile C), soil temperature, water-filled pore space (WFPS) and extent of soil compaction. Grassland soil was incubated in jars where selected factors, considered at two or three amounts within the experimental range, were combined in an orthogonal array to determine the importance and interactions between factors with a L16 design, comprising 16 experimental units. Within this L16 design, 216 combinations of the full factorial experimental design were represented. Headspace nitrous oxide (N2O), methane (CH4) and carbon dioxide (CO2) concentrations were measured and used to calculate fluxes. Results found for the relative influence of factors (WFPS and NO3? addition were the main factors affecting N2O fluxes, whilst glucose, NO3? and soil temperature were the main factors affecting CO2 and CH4 fluxes) were consistent with those already well documented. Interactions between factors were also studied and results showed that factors with Little individual influence became more influential in combination. The proposed methodology offers new possibilities for GHG researchers to study interactions between influential factors and address the optimized sets of conditions to reduce GHG emissions in agro-ecosystems, while reducing the number of experimental units required compared with conventional experimental procedures that adjust one variable at a time

Influence of Tillage and Liming on N2O emission from a rainfed crop

Nitrous oxide (N2O) is the main greenhouse gas (GHG) produced by agricultural soils due to microbial processes. The application of N fertilizers is associated with an increase of N2O losses. However, it is possible to mitigate these emissions by the introduction of adequate management practices (Snyder et al., 2009). Soil conservation practices (i.e.no tillage, NT) have recently become widespread because they promote several positive effects (increases in soil organic carbonand soil fertility, reduction of soil erosion, etc). In terms of GHG emissions, there is no consensus in the literature on the effects of tillage on N2O. Several studies found that NT can produce greater (Baggs et al., 2003), lower (Malhi et al., 2006) or similar (Grandey et al., 2006) N2O emissions compared to traditional tillage (TT). This large uncertainty is associated with the duration of tillage practices and climatic variability. Liming is widely use to solve problems of soil acidity (Al toxicity, yield penalties, etc). Several studies show a decrease in N2O emissions with liming (Barton et al., 2013) whereas no significant effects or increases were observed in others (Galbally et al., 2010). The aim of this work was to evaluate the effects of tillage (NT vs TT) and liming application or not of Ca-amendment) on N2O emissions from an acid soil during a rainfed crop

Draft whole genome sequences of the periodontal pathobionts Porphyromonas gingivalis, Prevotella intermedia and Tannerella forsythia contain phase variable restriction modification systems

The periodontal strains used were collected during previous studies performed at the University of Cardiff (strains WW414, WW855 and WW2096), University of Bristol (WW2834, WW2842, WW2866, WW2881, WW28585, WW2903, WW2931, WW2952, WW3039, WW3040, and WW3102), King’s College London (WW5019, WW5127, and WW10960) and Queen Mary University of London (WW11663). Illumina sequencing was performed by the NUCLEUS Genomics Core Facility and data analysis used the Spectre2 and Alice2 High Performance Computing Facility at the University of Leicester. This work was in part funded by a grant from the BBSRC (BB/N002903/1) to MRO.Peer reviewedPublisher PD

DMPSA appliCation reduces N2O emissions from exogenous NH4 + and NO3 - sources in irrigated maize

Agriculture is a major anthropogenic source of nitrous oxide (N2O). Application of nitrogenous (N) fertilizers enhances the emission of this greenhouse gas (GHG), mainly due to the biogenic processes of nitrification and denitrification. The use of nitrification inhibitors (NIs), that delay the microbial oxidation of NH4 + to NO3 -, has been reported as a successful tool for mitigating N2O losses. In this context, a field experiment using 15N labeled fertilizers was carried out in an irrigated Mediterranean maize field aiming to evaluate the effectiveness of the NI 2-(3,4-dimethyl-1H-pyrazol-1-yl) succinic acid isomeric mixture (DMPSA) on mitigating N2O emissions, and assess the processes involved in its production. The experiment, performed in 1 m2 microplots, involved the application of 15NH4NO3 or NH4 15NO3 - (with and without DMPSA) to quantify the amount of N2O coming from exogenous NH4 +, exogenous NO3 - and endogenous soil N. The resulting N2O fluxes confirmed that the addition of DMPSA led to a significant (54%) abatement of this GHG. In this experiment, both nitrification and denitrification were partially inhibited by DMPSA. When NI was not applied, the largest N2O emissions were expected from NH4 + than from NO3 --based fertilizers due to nitrification

Microwave-Assisted Synthesis of Pt-Au Nanoparticles with Enhanced Electrocatalytic Activity for the Oxidation of Formic Acid

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) is gratefully acknowledged for financial support under Research Project BJT-2014/400117/2014-2 and for the research support (HV: grant #306151/2010-3). Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) is also acknowledged for financial support (grants #2013/07296-2 and #2013/16930-7), and scholarship (FWH: grant #2014/08030-9). GC gratefully acknowledges R. Camargo for his collaboration in the acquisition of the HR-TEM images and for useful discussion and suggestions.Peer reviewedPostprin

A teacher training workshop to promote the use of the VISIR Remote Laboratory for electrical circuits teaching

The learning of Physics involves building up and using lab experiments. In turn, teachers must be trained in experimenting and using several resources that enable them to design valuable teaching strategies and learning activities. Thanks to Information and Communication Technologies (ICT), virtual and remote labs can provide a framework where physical experiments can be developed. Altough remote labs have been in use for over a decade now in several countries and levels of education, its use at secondary schools in Latin America has not been reported yet. The Virtual Instruments System in Reality (VISIR) is one of these remote labs, suitable to practice in the area of electrical circuits. This paper aims at describing how this remote lab was used in a training workshop for secondary school level teachers of Physics in Costa Rica.info:eu-repo/semantics/publishedVersio

Parthenolide generates reactive oxygen species and autophagy in MDA-MB231 cells. A soluble parthenolide analogue inhibits tumour growth and metastasis in a xenograft model of breast cancer.

Triple-negative breast cancers (TNBCs) are clinically aggressive forms associated with a poor prognosis. We evaluated the cytotoxic effect exerted on triple-negative MDA-MB231 breast cancer cells both by parthenolide and its soluble analogue dimethylamino parthenolide (DMAPT) and explored the underlying molecular mechanism. The drugs induced a dose- and timedependent decrement in cell viability, which was not prevented by the caspase inhibitor z-VAD-fmk. In particular in the first hours of treatment (1–3 h), parthenolide and DMAPT strongly stimulated reactive oxygen species (ROS) generation. The drugs induced production of superoxide anion by activating NADPH oxidase. ROS generation caused depletion of thiol groups and glutathione, activation of c-Jun N-terminal kinase (JNK) and downregulation of nuclear factor kB (NF-kB). During this first phase, parthenolide and DMAPT also stimulated autophagic process, as suggested by the enhanced expression of beclin-1, the conversion of microtubule-associated protein light chain 3-I (LC3-I) to LC3-II and the increase in the number of cells positive to monodansylcadaverine. Finally, the drugs increased RIP-1 expression. This effect was accompanied by a decrement of pro-caspase 8, while its cleaved form was not detected and the expression of c-FLIPS markedly increased. Prolonging the treatment (5–20 h) ROS generation favoured dissipation of mitochondrial membrane potential and the appearance of necrotic events, as suggested by the increased number of cells positive to propidium iodide staining. The administration of DMAPT in nude mice bearing xenografts of MDA-MB231 cells resulted in a significant inhibition of tumour growth, an increment of animal survival and a marked reduction of the lung area invaded by metastasis. Immunohistochemistry data revealed that treatment with DMAPT reduced the levels of NF-kB, metalloproteinase-2 and -9 and vascular endothelial growth factor, while induced upregulation of phosphorylated JNK. Taken together, our data suggest a possible use of parthenolide for the treatment of TNBCs

Multiple sodium channel isoforms mediate the pathological effects of Pacific ciguatoxin-1

This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/Human intoxication with the seafood poison ciguatoxin, a dinoflagellate polyether that activates voltage-gated sodium channels (NaV), causes ciguatera, a disease characterised by gastrointestinal and neurological disturbances. We assessed the activity of the most potent congener, Pacific ciguatoxin-1 (P-CTX-1), on NaV1.1–1.9 using imaging and electrophysiological approaches. Although P-CTX-1 is essentially a non-selective NaV toxin and shifted the voltage-dependence of activation to more hyperpolarising potentials at all NaV subtypes, an increase in the inactivation time constant was observed only at NaV1.8, while the slope factor of the conductance-voltage curves was significantly increased for NaV1.7 and peak current was significantly increased for NaV1.6. Accordingly, P-CTX-1-induced visceral and cutaneous pain behaviours were significantly decreased after pharmacological inhibition of NaV1.8 and the tetrodotoxin-sensitive isoforms NaV1.7 and NaV1.6, respectively. The contribution of these isoforms to excitability of peripheral C- and A-fibre sensory neurons, confirmed using murine skin and visceral single-fibre recordings, reflects the expression pattern of NaV isoforms in peripheral sensory neurons and their contribution to membrane depolarisation, action potential initiation and propagation

Settle down! Ranging behaviour responses of roe deer to different capture and release methods

16openInternationalInternational coauthor/editorThe fitting of tracking devices to wild animals requires capture and handling which causes stress and can potentially cause injury, behavioural modifications that can affect animal welfare and the output of research. We evaluated post capture and release ranging behaviour responses of roe deer (Capreolus capreolus) for five different capture methods. We analysed the distance from the centre of gravity and between successive locations, using data from 14 different study sites within the EURODEER collaborative project. Independently of the capture method, we observed a shorter distance between successive locations and contextual shift away from the home range centre of gravity after the capture and release event. However, individuals converged towards the average behaviour within a relatively short space of time (between 10 days and one month). If researchers investigate questions based on the distance between successive locations of the home range, we recommend (1) initial investigation to establish when the animals start to behave normally again or (2) not using the first two to three weeks of data for their analysis. We also encourage researchers to continually adapt methods to minimize stress and prioritize animal welfare wherever possible, according to the Refinement of the Three R’sopenBergvall, Ulrika A; Morellet, Nicolas; Kjellander, Petter; Rauset, Geir R; Groeve, Johannes De; Borowik, Tomasz; Brieger, Falko; Gehr, Benedikt; Heurich, Marco; Hewison, A J Mark; Kröschel, Max; Pellerin, Maryline; Saïd, Sonia; Soennichsen, Leif; Sunde, Peter; Cagnacci, FrancescaBergvall, U.A.; Morellet, N.; Kjellander, P.; Rauset, G.R.; Groeve, J.D.; Borowik, T.; Brieger, F.; Gehr, B.; Heurich, M.; Hewison, A.J.M.; Kröschel, M.; Pellerin, M.; Saïd, S.; Soennichsen, L.; Sunde, P.; Cagnacci, F

Settle Down! Ranging Behaviour Responses of Roe Deer to Different Capture and Release Methods

Simple Summary The study of animal movement in wild, free ranging species is fundamental for advancing knowledge on ecosystem relationships and for conservation. The deployment of bio-logging devices to this purpose (often GPS-collars in large mammals) requires relatively invasive procedures, such as capture, handling and release. Capture and manipulation cause behavioural modifications that are largely understudied in wild species and may affect both the welfare of animals and the output of the studies. We evaluated post capture and release ranging behaviour responses of a small deer species (roe deer Capreolus capreolus) for five different capture methods across 14 study sites within the EURODEER collaborative project. Roe deer showed modifications in their movement behaviour, independently of the capture method. However, individuals recovered rapidly, converging towards the average behaviour within a relatively short interval of time (between 10 days and one month), demonstrating a general resilience to such stressful events. We encourage researchers to continually adapt capture and handling methods so as to minimize stress and prioritize animal welfare. The fitting of tracking devices to wild animals requires capture and handling which causes stress and can potentially cause injury, behavioural modifications that can affect animal welfare and the output of research. We evaluated post capture and release ranging behaviour responses of roe deer (Capreolus capreolus) for five different capture methods. We analysed the distance from the centre of gravity and between successive locations, using data from 14 different study sites within the EURODEER collaborative project. Independently of the capture method, we observed a shorter distance between successive locations and contextual shift away from the home range centre of gravity after the capture and release event. However, individuals converged towards the average behaviour within a relatively short space of time (between 10 days and one month). If researchers investigate questions based on the distance between successive locations of the home range, we recommend (1) initial investigation to establish when the animals start to behave normally again or (2) not using the first two to three weeks of data for their analysis. We also encourage researchers to continually adapt methods to minimize stress and prioritize animal welfare wherever possible, according to the Refinement of the Three R's