Association between GNRHR, LHR and IGF1 polymorphisms and timing of puberty in male Angus cattle

<p>Abstract</p> <p>Background</p> <p>In bovines, there are significant differences within and among beef breeds in the time when bulls reach puberty. Although the timing of puberty is likely to be a multigenic trait, previous studies indicate that there may also be single genes that exert major effects on the timing of puberty within the general population. Despite its economic importance, there are not many SNPs or genetic markers associated with the age of puberty in male cattle. In the present work, we selected three candidate genes, <it>GNRHR</it>, <it>LHR </it>and <it>IGF1</it>, and associated their polymorphisms with the age of puberty in Angus male cattle.</p> <p>Results</p> <p>After weaning, 276 Angus males were measured every month for weight (W), scrotal circumference (SC), sperm concentration (C) and percentage of motility (M). A total of 4 SNPs, two within <it>GNRHR</it>, one in <it>LHR </it>and one in <it>IGF1 </it>were genotyped using the pyrosequencing technique. <it>IGF1-SnaBI SNP </it>was significant associated (P < 0.01) with age at SC 28 cm, but it were not associated with age at M 10% and C 50 million. Genotype <it>CC </it>exhibited an average age at SC 28 cm of 7 and 11 days higher than <it>CT </it>(p = 0.037) and <it>TT </it>(p = 0.012), respectively. This SNP explained 1.5% of the genetic variance of age of puberty at SC28. <it>LHR-I499L</it>, <it>GNRHR-SNP5 </it>and <it>GNRHR-SNP6 </it>were not associated with any of the measurements. However, <it>GNRHR </it>haplotypes showed a suggestive association with age at SC 28 cm.</p> <p>Conclusions</p> <p>The findings presented here could support the hypothesis that <it>IGF1 </it>is a regulator of the arrival to puberty in male calves and is involved in the events that precede and initiate puberty in bull calves. Given that most studies in cattle, as well as in other mammals, were done in female, the present results are the first evidence of markers associated with age at puberty in male cattle.</p

Comparison of the effectiveness of microsatellites and SNP panels for genetic identification, traceability and assessment of parentage in an inbred Angus herd

During the last decade, microsatellites (short tandem repeats or STRs) have been successfully used for animal genetic identification, traceability and paternity, although in recent year single nucleotide polymorphisms (SNPs) have been increasingly used for this purpose. An efficient SNP identification system requires a marker set with enough power to identify individuals and their parents. Genetic diagnostics generally include the analysis of related animals. In this work, the degree of information provided by SNPs for a consanguineous herd of cattle was compared with that provided by STRs. Thirty-six closely related Angus cattle were genotyped for 18 STRs and 116 SNPs. Cumulative SNPs exclusion power values (Q) for paternity and sample matching probability (MP) yielded values greater than 0.9998 and 4.32E-42, respectively. Generally 2-3 SNPs per STR were needed to obtain an equivalent Q value. The MP showed that 24 SNPs were equivalent to the ISAG (International Society for Animal Genetics) minimal recommended set of 12 STRs (MP ~ 10-11). These results provide valuable genetic data that support the consensus SNP panel for bovine genetic identification developed by the Parentage Recording Working Group of ICAR (International Committee for Animal Recording)

Polymorphisms of BoLA-DRB3 gene and its association with resistance / susceptibility to Leucosis in Holstein cattle from La Pampa

La leucosis bovina enzoótica es una enfermedad del ganado bovino adulto causada por el retrovirus de la leucemia bovina. Se puede manifestar como: una forma asintomática aleucémica, con un número normal de linfocitos B en sangre; una forma de linfocitosis permanente, con aumento del número de linfocitos B y como una presentación linfoproliferativa tumoral en forma de linfosarcoma. Los alelos de los genes del Complejo Principal de Histocompatibilidad Bovino (BoLA) han sido asociados con resistencia y susceptibilidad a enfermedades infecciosas. El objetivo general del presente estudio consistió en asociar los polimorfismos del exón 2 del gen BoLA-DRB3.2, definidos mediante la técnica de Reacción en Cadena de la Polimerasa y la técnica de Polimorfismos de la Longitud de los Fragmentos de Restricción (PCR-RFLP), con resistencia/susceptibilidad a leucosis en vacas Holstein de La Pampa. Se basó en un diseño caso/control, para lo cual se tomó muestra de sangre a 150 animales en 3 oportunidades con intervalos de tres meses cada una. Los animales fueron incluidos en el grupo caso cuando dieron positivos en la prueba de inmunodeficiencia en agar (DIDA) y cuyo recuento linfocitario en sangre fue ≥ 10.000 linfocitos/µl y el grupo control estuvo constituido con animales negativos en DIDA y que tenían < 10.000 linfocitos/µl de sangre. Los tests Exacto de Fisher y Odds Ratio (OR) de Woolf-Haldane se utilizaron para estudiar la asociación entre recuento de linfocitos y resultados del DIDA con las variantes alélicas. En 82 animales genotipados por PCRRFLP el alelo DRB3.2*22 evidenció un OR= 5,332 (p= 0,0138) y el alelo DRB3.2*11 mostró un OR= 0,11 (p=0,001) siendo más frecuentes en el grupo caso y en el grupo control, respectivamente. Estos resultados evidenciarían que vacas con el alelo DRB3.2*22 presentarían mayor riesgo a desarrollar leucosis y vacas con el alelo DRB3.2*11 un menor riesgo (resistencia). El análisis de la relación entre alelos del gen BoLA-DRB3.2 y resistencia/susceptibilidad a leucosis podría mejorarse con investigaciones profundas en linajes familiares de vacas lecheras.EBL is a disease of adult cattle caused by the retrovirus, bovine leukemia. It can manifest: aleukemic an asymptomatic form, with a normal number of B lymphocytes in the blood; a form of permanent lymphocytosis, with an increase in the number of B lymphocytes and finally a lymphoproliferative tumor presentation in the form of lymphosarcoma. The alleles of the genes of the Bovine Major Histocompatibility Complex (BoLA) have been associated with resistance and susceptibility to infectious diseases. The overall objective of this study was to associate polymorphisms of the BoLA-DRB3.2 gene, defined by the technique of polymerase chain reaction technique and polymorphisms length of the restriction fragment (PCR-RFLP), with resistance / susceptibility to leucosis in Holstein cows of La Pampa. It relied on a case/control design, for which blood samples were taken to 150 animals in 3 opportunities with intervals of three months each. The case group comprised animals that were positive in the immunodiffusion agar animals test (DIDA) and whose blood lymphocyte count was ≥ 10.000 linf/µl and the control group included cows that ware negative for DIDA and present < 10.000 linf/µl of blood. Fisher’s Exact test and Odds Ratio (OR) of Woolf-Haldane were used to study the association between lymphocyte count and DIDA results with allelic variants. In 82 animals genotyped by PCR-RFLP, the DRB3.2*22 allele showed an OR = 5.332 (p = 0.0138) and DRB3.2*11 allele had a OR value of 0.11 (p=0.001) and were the most frequent in the control group and in the case group, respectively. These results would showed DRB3.2*22 allele and DRB3.2*11 allele a high risk of having leucosis (susceptibility) and low risk to suffer (resistance) respectively. The analysis of the relationship between alleles of the BoLA and resistance/susceptibility to leucosis could be improved with deep research on family lineages of dairy cows.Fil: Baltian, Laura Rosana. Universidad Nacional de La Pampa. Facultad de Ciencias Veterinarias; ArgentinaFil: Follmer, A. V.. Universidad Nacional de La Pampa. Facultad de Ciencias Veterinarias; ArgentinaFil: Peratta, Delia Lidia. Universidad Nacional de La Pampa. Facultad de Ciencias Veterinarias; ArgentinaFil: Schmidt, E. E.. Universidad Nacional de La Pampa. Facultad de Ciencias Veterinarias; ArgentinaFil: Severini, R. A.. Universidad Nacional de La Pampa. Facultad de Ciencias Veterinarias; ArgentinaFil: Delbonis, S.. Universidad Nacional de La Pampa. Facultad de Ciencias Veterinarias; ArgentinaFil: Borrego, Carolina. Universidad Nacional de La Pampa. Facultad de Ciencias Veterinarias; ArgentinaFil: Alvarez Rubianez, N.. Universidad Nacional de La Pampa. Facultad de Ciencias Veterinarias; ArgentinaFil: Ripoli, María Verónica. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico CONICET- La Plata. Instituto de Genética Veterinaria ; ArgentinaFil: Giovambattista, Guillermo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico CONICET- La Plata. Instituto de Genética Veterinaria ; Argentin

Stoma-free Survival After Rectal Cancer Resection With Anastomotic Leakage: Development and Validation of a Prediction Model in a Large International Cohort.

Objective:To develop and validate a prediction model (STOMA score) for 1-year stoma-free survival in patients with rectal cancer (RC) with anastomotic leakage (AL).Background:AL after RC resection often results in a permanent stoma.Methods:This international retrospective cohort study (TENTACLE-Rectum) encompassed 216 participating centres and included patients who developed AL after RC surgery between 2014 and 2018. Clinically relevant predictors for 1-year stoma-free survival were included in uni and multivariable logistic regression models. The STOMA score was developed and internally validated in a cohort of patients operated between 2014 and 2017, with subsequent temporal validation in a 2018 cohort. The discriminative power and calibration of the models' performance were evaluated.Results:This study included 2499 patients with AL, 1954 in the development cohort and 545 in the validation cohort. Baseline characteristics were comparable. One-year stoma-free survival was 45.0% in the development cohort and 43.7% in the validation cohort. The following predictors were included in the STOMA score: sex, age, American Society of Anestesiologist classification, body mass index, clinical M-disease, neoadjuvant therapy, abdominal and transanal approach, primary defunctioning stoma, multivisceral resection, clinical setting in which AL was diagnosed, postoperative day of AL diagnosis, abdominal contamination, anastomotic defect circumference, bowel wall ischemia, anastomotic fistula, retraction, and reactivation leakage. The STOMA score showed good discrimination and calibration (c-index: 0.71, 95% CI: 0.66-0.76).Conclusions:The STOMA score consists of 18 clinically relevant factors and estimates the individual risk for 1-year stoma-free survival in patients with AL after RC surgery, which may improve patient counseling and give guidance when analyzing the efficacy of different treatment strategies in future studies

Stoma-free survival after anastomotic leak following rectal cancer resection: worldwide cohort of 2470 patients

Background: The optimal treatment of anastomotic leak after rectal cancer resection is unclear. This worldwide cohort study aimed to provide an overview of four treatment strategies applied. Methods: Patients from 216 centres and 45 countries with anastomotic leak after rectal cancer resection between 2014 and 2018 were included. Treatment was categorized as salvage surgery, faecal diversion with passive or active (vacuum) drainage, and no primary/secondary faecal diversion. The primary outcome was 1-year stoma-free survival. In addition, passive and active drainage were compared using propensity score matching (2: 1). Results: Of 2470 evaluable patients, 388 (16.0 per cent) underwent salvage surgery, 1524 (62.0 per cent) passive drainage, 278 (11.0 per cent) active drainage, and 280 (11.0 per cent) had no faecal diversion. One-year stoma-free survival rates were 13.7, 48.3, 48.2, and 65.4 per cent respectively. Propensity score matching resulted in 556 patients with passive and 278 with active drainage. There was no statistically significant difference between these groups in 1-year stoma-free survival (OR 0.95, 95 per cent c.i. 0.66 to 1.33), with a risk difference of -1.1 (95 per cent c.i. -9.0 to 7.0) per cent. After active drainage, more patients required secondary salvage surgery (OR 2.32, 1.49 to 3.59), prolonged hospital admission (an additional 6 (95 per cent c.i. 2 to 10) days), and ICU admission (OR 1.41, 1.02 to 1.94). Mean duration of leak healing did not differ significantly (an additional 12 (-28 to 52) days). Conclusion: Primary salvage surgery or omission of faecal diversion likely correspond to the most severe and least severe leaks respectively. In patients with diverted leaks, stoma-free survival did not differ statistically between passive and active drainage, although the increased risk of secondary salvage surgery and ICU admission suggests residual confounding