191 research outputs found
The Unreasonable Effectiveness of Encoder-Decoder Networks for Retinal Vessel Segmentation
- Author
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- 25/11/2020
- Field of study
We propose an encoder-decoder framework for the segmentation of blood vessels
in retinal images that relies on the extraction of large-scale patches at
multiple image-scales during training. Experiments on three fundus image
datasets demonstrate that this approach achieves state-of-the-art results and
can be implemented using a simple and efficient fully-convolutional network
with a parameter count of less than 0.8M. Furthermore, we show that this
framework - called VLight - avoids overfitting to specific training images and
generalizes well across different datasets, which makes it highly suitable for
real-world applications where robustness, accuracy as well as low inference
time on high-resolution fundus images is required
Disparities and risks of sexually transmissible infections among men who have sex with men in China: a meta-analysis and data synthesis.
- Author
- A Liberati
- A Thornton
- AL Cunningham
- AN Poon
- B Zhang
- B Zhang
- BC Zhang
- BC Zhang
- BC Zhang
- BC Zhang
- C Beyrer
- C Diamond
- C Wang
- C Wang
- C Yang
- C Zhou
- CF Houlihan
- CG Lu
- CG Lu
- CH Wang
- CJ Hoffmann
- CM Vajdic
- CS Graham
- CT Gong
- CX Zhou
- CX Zhou
- D Altman
- D Bradshaw
- D Cox
- D Joshi
- D Zhang
- DA Machalek
- DD Zhang
- DT Fleming
- DY Sun
- EA Operskalski
- EE Freeman
- EP Chow
- EP Chow
- EP Chow
- EP Chow
- Eric J. Nehl
- Eric P. F. Chow
- F Jin
- F Jin
- F Song
- F Yuan
- FH Xue
- Frank Y. Wong
- FY Mao
- G Chen
- GF Cai
- GF Zhang
- GH Lan
- GL Ma
- GR Seage 3rd
- H Guo
- H He
- H Klein
- H Lin
- H Shang
- H Ward
- H Zhang
- H Zou
- HL Wang
- HW Xiao
- HY Lu
- J Buffington
- J Jiang
- J Wu
- J Wu
- JA Rottingen
- JA Sterne
- JA Sterne
- JD Tucker
- JF Feng
- JF Hu
- JH MacLachlan
- JL Fleiss
- JL Harris
- JL Yao
- JM Palefsky
- Joseph D. Tucker
- JP Higgins
- JP Higgins
- JR Lama
- JT Lau
- JT Lau
- Julian W. Tang
- JX Wang
- KH Choi
- KH Mayer
- KH Mayer
- KT Bernstein
- L Gao
- L Liang
- L Lu
- L Mei
- L Wang
- L Zhang
- L Zhang
- L Zhang
- L Zhang
- Lei Zhang
- LF Johnson
- LF Xi
- LG Feng
- LP Deng
- M MiloĆĄeviÄ
- M Singer
- M Wang
- M Zhang
- M Zheng
- MA Stanley
- MC Singer
- MG Peters
- MJ Donlin
- ML Sun
- MS Cohen
- MZ Liao
- N He
- NM Boukli
- P Chen
- P Van de Ven
- PJ Saxton
- PL Liu
- PL Reiter
- PV Chin-Hong
- Q He
- Q He
- Q He
- Q Hu
- QL Yu
- R DerSimonian
- R Quinn
- R Zhang
- RS Remis
- S Dai
- S Kippax
- S Liu
- S Sanderson
- SH Chen
- SH Chen
- SH Chen
- SH Mooij
- SR Galvin
- SZ Qi
- T Hesketh
- T Hesketh
- T Wang
- TB Huedo-Medina
- TJ van de Laar
- TJ van de Laar
- V Soriano
- W Wang
- WD Cai
- WD Shi
- WH Wang
- WL Parish
- X Cai
- X Han
- X Liang
- X Ma
- X Meng
- X Wang
- X Zhang
- X Zhu
- X Zhuang
- X Zhuang
- XB Ding
- XD Shi
- XH Zhao
- XL Miao
- XM Chen
- XP Huan
- XS Chen
- XS Chen
- Xun Zhuang
- XX Chen
- Y Bai
- Y Feng
- Y Gu
- Y Hong
- Y Hu
- Y Lan
- Y Li
- Y Liu
- Y Ruan
- Y Ruan
- Y Wang
- Y Wang
- Y Zhang
- Yanjie Wang
- YP Yin
- YQ Weng
- YY Liu
- Z Luo
- ZF Miao
- ZH Zhou
- ZJ Wang
- ZK Zhang
- ZX Sun
- Publication venue
- 'Public Library of Science (PLoS)'
- Publication date
- 01/01/2014
- Field of study
BACKGROUND: Sexually transmitted infections (STIs), including Hepatitis B and C virus, are emerging public health risks in China, especially among men who have sex with men (MSM). This study aims to assess the magnitude and risks of STIs among Chinese MSM. METHODS: Chinese and English peer-reviewed articles were searched in five electronic databases from January 2000 to February 2013. Pooled prevalence estimates for each STI infection were calculated using meta-analysis. Infection risks of STIs in MSM, HIV-positive MSM and male sex workers (MSW) were obtained. This review followed the PRISMA guidelines and was registered in PROSPERO. RESULTS: Eighty-eight articles (11 in English and 77 in Chinese) investigating 35,203 MSM in 28 provinces were included in this review. The prevalence levels of STIs among MSM were 6.3% (95% CI: 3.5-11.0%) for chlamydia, 1.5% (0.7-2.9%) for genital wart, 1.9% (1.3-2.7%) for gonorrhoea, 8.9% (7.8-10.2%) for hepatitis B (HBV), 1.2% (1.0-1.6%) for hepatitis C (HCV), 66.3% (57.4-74.1%) for human papillomavirus (HPV), 10.6% (6.2-17.6%) for herpes simplex virus (HSV-2) and 4.3% (3.2-5.8%) for Ureaplasma urealyticum. HIV-positive MSM have consistently higher odds of all these infections than the broader MSM population. As a subgroup of MSM, MSW were 2.5 (1.4-4.7), 5.7 (2.7-12.3), and 2.2 (1.4-3.7) times more likely to be infected with chlamydia, gonorrhoea and HCV than the broader MSM population, respectively. CONCLUSION: Prevalence levels of STIs among MSW were significantly higher than the broader MSM population. Co-infection of HIV and STIs were prevalent among Chinese MSM. Integration of HIV and STIs healthcare and surveillance systems is essential in providing effective HIV/STIs preventive measures and treatments. TRIAL REGISTRATION: PROSPERO NO: CRD42013003721
Clustering-based approaches to SAGE data mining
- Author
- C Keime
- D Porter
- F Rioult
- Francisco Azuaje
- GM Boratyn
- H Chen
- H Thygesen
- H Wang
- H Wang
- H Wang
- H Zheng
- Haiying Wang
- Huiru Zheng
- I Mechaly
- J Handl
- J Lu
- J Sander
- J Stollberg
- JB Vos
- JM Ruijter
- K Kim
- KA Baggerly
- KA Baggerly
- L Cai
- MA El-Meanawy
- MA Gilchrist
- MB Eisen
- MC Abba
- MZ Man
- N Bolshakova
- P Buckhaults
- P Divina
- P Tamayo
- RT Ng
- RZ VĂȘncio
- S Audic
- S Blackshaw
- S Mclntosh
- S Saha
- SD Zuyderduyn
- T BeiĂbarth
- T Chu
- T Kohonen
- T Lee
- VE Velculescu
- VR Akmaev
- VR Akmaev
- W Chan
- W Yasui
- WD Patino
- X Jin
- Publication venue
- BioMed Central
- Publication date
- 01/01/2008
- Field of study
Serial analysis of gene expression (SAGE) is one of the most powerful tools for global gene expression profiling. It has led to several biological discoveries and biomedical applications, such as the prediction of new gene functions and the identification of biomarkers in human cancer research. Clustering techniques have become fundamental approaches in these applications. This paper reviews relevant clustering techniques specifically designed for this type of data. It places an emphasis on current limitations and opportunities in this area for supporting biologically-meaningful data mining and visualisation
HIV and Syphilis Co-Infection Increasing among Men Who Have Sex with Men in China: A Systematic Review and Meta-Analysis
- Author
- A Thornton
- B Zhang
- CC Lin
- CC Lin
- CG Lu
- CG Lu
- CH Wang
- Claire Thorne
- D Moher
- David P. Wilson
- E Pisani
- Eric P. F. Chow
- F Feng
- F Jin
- F Wen
- F Zhong
- FC Hong
- G Karp
- G Mi
- G Zeng
- GF Cai
- GH Lan
- H Guo
- H Liu
- H Xu
- H Yang
- HP Zhao
- HY Lu
- I Bozicevic
- J Hu
- J Jiang
- J Ma
- J Wang
- J Wang
- J Wu
- J Xu
- J Xu
- J Zhou
- JA Rottingen
- JD Tucker
- JD Zhang
- JF Feng
- JJ Xu
- JL Zhu
- JM Nasio
- JP Sun
- KH Choi
- L Feng
- L Gao
- L Liang
- L Qu
- L Qu
- Lei Zhang
- LJ Fu
- M Angell
- M Jia
- M Sun
- M Zhang
- MH Razak
- ML Sun
- MS Cohen
- MZ Liao
- Q He
- Q He
- S Baral
- S Chen
- S Kassutto
- S Ruan
- S Tabet
- SM Jiang
- SP Yang
- SS Solomon
- TJ Feng
- U Marcus
- WD Cai
- WD Shi
- WH Lai
- WM Tang
- X Cai
- X Ma
- X Zhang
- XB Ding
- XL Wang
- XS Chen
- XW Qiao
- XY Han
- XY Tao
- Y Feng
- Y Gu
- Y Guo
- Y Li
- Y Ruan
- Y Ruan
- Y Wang
- Y Wang
- Y Xiao
- Y Xiao
- Y Zhang
- YG Bao
- YM Cai
- YQ Weng
- YW Duan
- YW Zhu
- ZF Miao
- ZH Xu
- ZQ Chen
- ZX Lu
- Publication venue
- Public Library of Science
- Publication date
- 01/01/2011
- Field of study
BACKGROUND: This study aims to estimate the magnitude and changing trends of HIV, syphilis and HIV-syphilis co-infections among men who have sex with men (MSM) in China during 2003-2008 through a systematic review of published literature. METHODOLOGY/PRINCIPAL FINDINGS: Chinese and English literatures were searched for studies reporting HIV and syphilis prevalence among MSM from 2003 to 2008. The prevalence estimates were summarized and analysed by meta-analyses. Meta-regression was used to identify the potential factors that are associated with high heterogeneities in meta-analysis. Seventy-one eligible articles were selected in this review (17 in English and 54 in Chinese). Nationally, HIV prevalence among MSM increased from 1.3% during 2003-2004 to 2.4% during 2005-2006 and to 4.7% during 2007-2008. Syphilis prevalence increased from 6.8% during 2003-2004 to 10.4% during 2005-2006 and to 13.5% during 2007-2008. HIV-syphilis co-infection increased from 1.4% during 2005-2006 to 2.7% during 2007-2008. Study locations and study period are the two major contributors of heterogeneities of both HIV and syphilis prevalence among Chinese MSM. CONCLUSIONS/SIGNIFICANCE: There have been significant increases in HIV and syphilis prevalence among MSM in China. Scale-up of HIV and syphilis screening and implementation of effective public health intervention programs should target MSM to prevent further spread of HIV and syphilis infection
Regulation of MicroRNA Biogenesis: A miRiad of mechanisms
- Author
- A Cheever
- A Esquela-Kerscher
- A Haase
- A Hanamura
- A Jagannath
- A Kuehbacher
- A Lujambio
- A Lujambio
- A Rodriguez
- A Rybak
- A Shiohama
- A Shiohama
- A Stark
- A Stark
- AA Aravin
- AE Pasquinelli
- AG Seto
- AJ Schetter
- Akiko Hata
- AM Denli
- AM Duursma
- B Brueckner
- B Carpenter
- B Kefas
- B Muralidhar
- B Wightman
- B Yu
- BD Adams
- BJ Reinhart
- BL Black
- BN Davis
- BN Davis
- Brandi N Davis
- C Conaco
- C Gwizdek
- CM Hammell
- CM Hammell
- CP Bracken
- CP Petersen
- D Baek
- D Grimm
- D Kaul
- D O'Carroll
- DL Corcoran
- DM Tyler
- DP Bartel
- DR Warner
- DT Humphreys
- E Allemand
- E Berezikov
- E Lund
- E Ma
- E Maniataki
- E Piskounova
- E van Rooij
- E van Rooij
- ED Jensen
- EJ Lee
- EJ Lee
- F Ozsolak
- FG Wulczyn
- FV Fuller-Pace
- FV Fuller-Pace
- FV Rivas
- G Caretti
- G Hutvagner
- G Hutvagner
- G Hutvagner
- G Lugli
- G Martin
- G Michlewski
- G Obernosterer
- G Shan
- G Song
- GA Calin
- GK Scott
- GM Borchert
- H Endoh
- H Hwang
- H Seitz
- H Zhang
- H Zhao
- HA Coller
- HH Qi
- HI Suzuki
- HK Saini
- HS Soifer
- HW Hwang
- I Behm-Ansmant
- I Bussing
- I Diaz-Moreno
- I Heo
- IJ MacRae
- IJ MacRae
- IJ Macrae
- IJ MacRae
- IM Pedersen
- J Andrae
- J Han
- J Han
- J Hock
- J Kim
- J Kim
- J Liu
- J Lu
- J Schwamborn
- J Visvanathan
- JF Chen
- JG Ruby
- JG Ruby
- JJ Forman
- JJ Han
- JM Cummins
- JM Pawlicki
- JM Thomson
- JR Lytle
- K Jazdzewski
- K Okamura
- KA O'Donnell
- KL Stark
- L He
- L Peters
- L Weinmann
- L Wu
- L Wu
- LF Sempere
- LJ Chin
- LP Lim
- M Bloomston
- M Eilers
- M Faller
- M Kato
- M Kedde
- M Lagos-Quintana
- M Landthaler
- M Morlando
- M Selbach
- M Trabucchi
- MA Newman
- MS Kumar
- MS Kumar
- MT Bohnsack
- MW Nasser
- MZ Michael
- N Ballas
- N Bushati
- N Iwai
- N Meyer
- N Raver-Shapira
- N Shimada
- N Sugito
- N Vo
- NC Lau
- O Ben-Ami
- P Brodersen
- P Jin
- P Landgraf
- PJ Mishra
- R Sandberg
- R Shalgi
- R Yi
- R Yi
- RC Friedman
- RF Ketting
- RH Duan
- RI Gregory
- RI Gregory
- RS Pillai
- S Ambs
- S Baskerville
- S Chiosea
- S Chiosea
- S Diederichs
- S Diederichs
- S Guil
- S Kadener
- S Nottrott
- S Rane
- S Ro
- S Roush
- S Sakamoto
- S Singh
- S Tokumaru
- S Vasudevan
- S Vasudevan
- SA Melo
- SH Lu
- SN Bhattacharyya
- T Fukao
- T Fukuda
- T Kaneko-Ishino
- T Katoh
- T Ruggiero
- TC Chang
- TC Chang
- TP Chendrimada
- V Ramachandran
- VB Sampson
- VK Gangaraju
- VN Kim
- W Filipowicz
- W Xie
- W Yang
- WP Kloosterman
- WP Kloosterman
- X Cai
- XZ Cai
- Y Akao
- Y Akao
- Y Karube
- Y Kawahara
- Y Kawahara
- Y Kawahara
- Y Lee
- Y Lee
- Y Lee
- Y Lee
- Y Saito
- Y Zeng
- Y Zeng
- YK Kim
- YW Kong
- Z Ji
- Publication venue
- BioMed Central
- Publication date
- 01/01/2009
- Field of study
microRNAs are small, non-coding RNAs that influence diverse biological functions through the repression of target genes during normal development and pathological responses. Widespread use of microRNA arrays to profile microRNA expression has indicated that the levels of many microRNAs are altered during development and disease. These findings have prompted a great deal of investigation into the mechanism and function of microRNA-mediated repression. However, the mechanisms which govern the regulation of microRNA biogenesis and activity are just beginning to be uncovered. Following transcription, mature microRNA are generated through a series of coordinated processing events mediated by large protein complexes. It is increasingly clear that microRNA biogenesis does not proceed in a 'one-size-fits-all' manner. Rather, individual classes of microRNAs are differentially regulated through the association of regulatory factors with the core microRNA biogenesis machinery. Here, we review the regulation of microRNA biogenesis and activity, with particular focus on mechanisms of post-transcriptional control. Further understanding of the regulation of microRNA biogenesis and activity will undoubtedly provide important insights into normal development as well as pathological conditions such as cardiovascular disease and cancer
Large expert-curated database for benchmarking document similarity detection in biomedical literature search
- Author
- Aanei CM
- Abid MB
- Abramowitz MK
- Abu-Zaid A
- Afnan M
- Agarabi C
- Ahmad R
- Aizat WM
- Al-Farha AA
- Al-Lawama M
- Alanio A
- Alaux C
- Albiol J
- Albrecht DR
- Albuquerque LG
- Alimba CG
- Allardyce J
- Almeida GMF
- Alonso-Caneiro D
- Alper OM
- Amer SEDR
- Amiya E
- Ammerman BA
- Amorim RM
- An Q
- Andersen SU
- Aplin JD
- Argyropoulos C
- Armitage C
- Ascher DB
- Ashry M
- Asmann YW
- Assaeed AM
- Atack JM
- Atanasov AG
- Atchison DA
- Atkins GJ
- Atlas L
- Avery SV
- Avillach P
- Baade PD
- Backman L
- Badie C
- Bae T
- Baier D
- Baker CI
- Bakkach J
- Baldi A
- Ball E
- Bannon R
- Bansal A
- Bardot O
- Barnett AG
- Barraud P
- Basharat Z
- Basner M
- Batra J
- Baumert P
- Bazanova OM
- Beale A
- Beck CR
- Becker D
- Beddoe T
- Bell ML
- Benezeth Y
- Bengtsson-Palme J
- Berbesque C
- Berezikov E
- Bergsland N
- Berners-Price S
- Bernhardt P
- Berrevoet F
- Berry E
- Berthold M
- Bessa TB
- Beyene TJ
- Biedermann PHW
- Bijleveld E
- Billington C
- Birch J
- Bittner F
- Bitzer M
- Blakely RD
- Blanck O
- Blaskovich MAT
- Bleackley M
- Blombach F
- Blum R
- Boehme KA
- Boelaert M
- Bogdanos D
- Bonvin AMJJ
- Bosch C
- Bosch O
- Boudreau SA
- Bourgoin T
- Bourke E
- Bouvard D
- Boykin LM
- Bradley G
- Bradshaw W
- Bramoweth AD
- Brand T
- Braubach O
- Braun D
- Braun RJ
- Brenneisen P
- Bridges KM
- Brown JAL
- Brown P
- Browngardt C
- Brownlie J
- Bruhl A
- Bukowy-Bieryllo Z
- Bull JA
- Burt A
- Bush SJ
- Butler LM
- Byrareddy SN
- Byrne HJ
- Cabantous S
- Cai Y
- Calatayud S
- Campana LG
- Campbell M
- Candal E
- Cao Z
- Cao Z
- Cardoso P
- Carlson K
- Carter D
- Cascella M
- Casillas S
- Castelvetro V
- Caswell PT
- Catry T
- Cavalli G
- Cernava T
- Cerovsky V
- Chacko G
- Chagoyen M
- Chakraborty S
- Chan SS
- Chandrasekaran AR
- Chatzitheochari S
- Chavez-Fumagalli MA
- Chen B
- Chen C-E
- Chen C-S
- Chen DF
- Chen H
- Chen H
- Chen J-T
- Chen X
- Chen Y
- Cheng C
- Cheng J
- Cheng S
- Cheung JTK
- Chinapaw M
- Chinopoulos C
- Cho WCS
- Chong L
- Chowdhury D
- Chung H-J
- Chwalibog A
- Ciresi A
- Cobine PA
- Cockcroft S
- Coelho LP
- Colella V
- Conesa A
- Conway A
- Cook PA
- Cooper DN
- Cooper J
- Coqueret O
- Corea EM
- Cosacak MI
- Costa BM
- Costa E
- Costa VD
- Coupland C
- Crawford SY
- Cruz AD
- Cui H
- Cui Q
- Cuiv PO
- Culver DC
- Cuypers M
- Cyr N
- D'Angiulli A
- Dahms TES
- Dai Z
- Daigle F
- Dalgleish R
- Dalrymple BP
- Danchin A
- Danielsen HE
- Darras S
- Daulatabad SV
- Davidson SM
- Day DA
- de Keersmaecker K
- de Leeuw F-E
- Dean LT
- Debrabant B
- Degirmenci V
- del Tredici AL
- Delahay RM
- Demaison L
- Denzel MS
- Deschodt M
- Devkota HP
- Devriendt K
- Dhariwal R
- Diao J
- Ding J
- Dings RPM
- Diouf B
- Dixon R
- Dlamini SV
- Dogan Y
- Domingues HS
- Dong XC
- Donner CF
- Dono M
- Doxey AC
- Dressick W
- Drevon CA
- Duan H
- Ducho C
- Ducommun B
- Dudley KJ
- Dufies M
- Duijf PHG
- Dumaz N
- Dwarakanath BS
- Ebell MH
- Echeverria N
- Ecke T
- Eckweiler D
- Eerola T
- Effiong A
- Ehret F
- Eisenhardt S
- Eixarch E
- El-Adawy H
- El-Esawi MA
- Elkum N
- Emmrich JV
- Engel MS
- Engel N
- Epp T
- Erickson TB
- Esfahlani SS
- Eskelinen E-L
- Eskew EA
- Esnakul AK
- Eustace AJ
- Evangelou E
- Fairhead M
- Falk S
- Fallah M
- Falter-Wagner CM
- Fan X
- Farber DB
- Faville MJ
- Feghali KA
- Fejzo MS
- Fernandez-Triana J
- Festa F
- Feteira A
- Feyerabend F
- Fierz W
- Filipp FV
- Fiona .
- Flegel WA
- Flood-Page P
- Florio T
- Forano E
- Forsayeth J
- Fox SA
- Franks SJ
- Frentiu FD
- Friebe M
- Frilander MJ
- Fu X
- Fujita S
- Furuta S
- Fuss J
- Gabrielsen M
- Gajda M
- Galea I
- Galluzzi L
- Gani F
- Ganpule AP
- Gao J
- Garcia-Alix A
- Gatchell M
- Gaullier G
- Gedye K
- Gelfer Y
- Ghelardi E
- Gill MR
- Gilliham M
- Giordano M
- Giunta C
- Gladue DP
- Gleeson PA
- Gloyn L
- Gnasso A
- Goarant C
- Gobet A
- Goggs R
- Gong H
- Gonzalezlez-Prendes R
- Goodin A
- Goodyear CS
- Gora D
- Gough MJ
- Govender P
- Govinden U
- Goyal R
- Graham EB
- Graham KE
- Grande-Perez A
- Graves PM
- Greene G
- Greenwald NF
- Greidanus H
- Greiff V
- Grice D
- Grimm DG
- Groen EJN
- Gruber J
- Grunau C
- Grundle DS
- Gruneberg P
- Grybos M
- Guisado JL
- Gumede N
- Gumulya Y
- Guo Y
- Gurevich VV
- Gurney-Champion OJ
- Gusev O
- Gutierrez-Sacristan A
- Habes M
- Hacker E
- Hage SR
- Hagen G
- Hahn S
- Haller DM
- Hammerschmidt S
- Han H
- Han J
- Han Q
- Han R
- Handfield M
- Hanson J
- Haore G
- Hapuarachchi HC
- Harder T
- Hardingham JE
- Harrison P
- Hartmann MD
- Harvey DJ
- Haston S
- Heck M
- Heers M
- Heffler E
- Heinrich M
- Helantera H
- Herbelet S
- Hew KF
- Higginbottom DB
- Higuchi Y
- Hilton R
- Hiroi N
- Hobbs E
- Hodzic E
- Hoenner X
- Hojsgaard D
- Hone A
- Hongoh Y
- Honjo K
- Horbar J
- Hori H
- Hu G
- Hu P
- Huber HP
- Huber M
- Hueso LE
- Huirne J
- Hurt L
- Huttner FJ
- Idborg H
- Ide K
- Ikeo K
- Ikonomopoulou MP
- Ingley E
- Jakeman PM
- Janga SC
- Janzen T
- Jayaraman J
- Jeltsch A
- Jensen A
- Jeurissen P
- Jia H
- Jia H
- Jia S
- Jiang F
- Jiang J
- Jiang X
- Jibb LA
- Jin Y
- Jo D
- Johnson AM
- Johnson DM
- Johnston M
- Jongen S
- Jonscher KR
- Jorens PG
- Jorgensen JOL
- Josse C
- Joubert JW
- Jung S-H
- Junior AM
- Jurman G
- Kabra D
- Kahan T
- Kaiser S
- Kamagata K
- Kamboj SK
- Kamiya H
- Kane NC
- Kang Y-K
- Karamanos Y
- Karmakar C
- Karp NA
- Kasian O
- Kauppila JH
- Kaye LK
- Kelly R
- Kelly S
- Kenna R
- Kennedy J
- Kersten B
- Khalaf RA
- Khalid JM
- Khan MM
- Khatlani T
- Khider T
- Kijanka GS
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- Publication venue
- OXFORD UNIV PRESS
- Publication date
- 29/10/2019
- Field of study
Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term FrequencyâInverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical research
Combination of searches for heavy spin-1 resonances using 139 fbâ1 of proton-proton collision data at s = 13 TeV with the ATLAS detector
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- Zenger DT
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- Zhao H
- Zhao T
- Zhao Y
- Zhao Z
- Zhao Z
- Zhemchugov A
- Zheng J
- Zheng K
- Zheng X
- Zheng Z
- Zhong D
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- Zhu CG
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- Zhu Y
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- Zhukov K
- Zimine NI
- Zinsser J
- Ziolkowski M
- Zoccoli A
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- Zorbas TG
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- Zou W
- Zwalinski L
- Ă kesson TPA
- Ăncel ĂO
- ĆœeniĆĄ T
- ĆœivkoviÄ L
- Publication venue
- Springer Nature
- Publication date
- 19/04/2024
- Field of study
A combination of searches for new heavy spin-1 resonances decaying into different pairings of W, Z, or Higgs bosons, as well as directly into leptons or quarks, is presented. The data sample used corresponds to 139 fbâ1 of proton-proton collisions at
= 13 TeV collected during 2015â2018 with the ATLAS detector at the CERN Large Hadron Collider. Analyses selecting quark pairs (qq, bb,
, and tb) or third-generation leptons (ÏÎœ and ÏÏ) are included in this kind of combination for the first time. A simplified model predicting a spin-1 heavy vector-boson triplet is used. Cross-section limits are set at the 95% confidence level and are compared with predictions for the benchmark model. These limits are also expressed in terms of constraints on couplings of the heavy vector-boson triplet to quarks, leptons, and the Higgs boson. The complementarity of the various analyses increases the sensitivity to new physics, and the resulting constraints are stronger than those from any individual analysis considered. The data exclude a heavy vector-boson triplet with mass below 5.8 TeV in a weakly coupled scenario, below 4.4 TeV in a strongly coupled scenario, and up to 1.5 TeV in the case of production via vector-boson fusion
Measurement and interpretation of same-sign W boson pair production in association with two jets in pp collisions at s = 13 TeV with the ATLAS detector
- Author
- Aad G
- Abbott B
- Abeling K
- Abicht NJ
- Abidi SH
- Aboulhorma A
- Abramowicz H
- Abreu H
- Abulaiti Y
- Abusleme Hoffman AC
- Acharya BS
- Adam Bourdarios C
- Adamczyk L
- Adamek L
- Addepalli SV
- Addison MJ
- Adelman J
- Adiguzel A
- Adye T
- Affolder AA
- Afik Y
- Agaras MN
- Agarwala J
- Aggarwal A
- Agheorghiesei C
- Ahmad A
- Ahmadov F
- Ahmed WS
- Ahuja S
- Ai X
- Aielli G
- Aikot A
- Ait Tamlihat M
- Aitbenchikh B
- Aizenberg I
- Akbiyik M
- Akimov AV
- Akiyama D
- Akolkar NN
- Al Khoury K
- Alberghi GL
- Albert J
- Albicocco P
- Albouy GL
- Alderweireldt S
- Aleksa M
- Aleksandrov IN
- Alexa C
- Alexopoulos T
- Alfonsi F
- Algren M
- Alhroob M
- Ali B
- Ali HMJ
- Ali S
- Alibocus SW
- Aliev M
- Alimonti G
- Alkakhi W
- Allaire C
- Allbrooke BMM
- Allen JF
- Allendes Flores CA
- Allport PP
- Aloisio A
- Alonso F
- Alpigiani C
- Alvarez Estevez M
- Alvarez Fernandez A
- Alves Cardoso M
- Alviggi MG
- Aly M
- Amaral Coutinho Y
- Ambler A
- Amelung C
- Amerl M
- Ames CG
- Amidei D
- Amor Dos Santos SP
- Amos KR
- Ananiev V
- Anastopoulos C
- Andeen T
- Anders JK
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- Zhemchugov A
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- Ă kesson TPA
- Ăncel ĂO
- ĆœeniĆĄ T
- ĆœivkoviÄ L
- Publication venue
- Springer Nature
- Publication date
- 01/04/2024
- Field of study
This paper presents the measurement of fducial and diferential cross sections for both the inclusive and electroweak production of a same-sign W-boson pair in association with two jets (W±W±jj) using 139 fbâ1 of proton-proton collision data recorded at a centre-of-mass energy of âs = 13 TeV by the ATLAS detector at the Large Hadron Collider. The analysis is performed by selecting two same-charge leptons, electron or muon, and at least two jets with large invariant mass and a large rapidity diference. The measured fducial cross sections for electroweak and inclusive W±W±jj production are 2.92 ± 0.22 (stat.) ± 0.19 (syst.)fb and 3.38±0.22 (stat.)±0.19 (syst.)fb, respectively, in agreement with Standard Model predictions. The measurements are used to constrain anomalous quartic gauge couplings by extracting 95% confdence level intervals on dimension-8 operators. A search for doubly charged Higgs bosons H±± that are produced in vector-boson fusion processes and decay into a same-sign W boson pair is performed. The largest deviation from the Standard Model occurs for an H±± mass near 450 GeV, with a global signifcance of 2.5 standard deviations
Search for squarks and gluinos in final states with jets and missing transverse momentum using 139 fbâ1 of sâ = 13 TeV pp collision data with the ATLAS detector
- Author
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- Yigitbasi E
- Yildirim E
- Yildiz HD
- Yorita K
- Yoshihara K
- Young C
- Young CJS
- Yu J
- Yu J
- Yue X
- Yuen SPY
- Zabinski B
- Zacharis G
- Zaffaroni E
- Zaidan R
- Zaitsev AM
- Zakareishvili T
- Zakharchuk N
- Zalieckas J
- Zambito S
- Zanzi D
- Zaripovas DR
- Zeissner SV
- Zeitnitz C
- Zemaityte G
- Zeng JC
- Zeng Q
- Zenin O
- Zenis T
- Zerwas D
- Zgubic M
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- Zhang X
- Zhang Y
- Zhang Z
- Zhao P
- Zhao X
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- Zhao Z
- Zhemchugov A
- Zhou B
- Zhou C
- Zhou L
- Zhou M
- Zhou MS
- Zhou N
- Zhou Y
- Zhu CG
- Zhu H
- Zhu HL
- Zhu J
- Zhu Y
- Zhuang X
- Zhukov K
- Zhulanov V
- Zibell A
- Zieminska D
- Zimine NI
- Zimmermann S
- Zinonos Z
- Zinser M
- Ziolkowski M
- Zivkovic L
- Zobernig G
- Zoccoli A
- Zoch K
- Zorbas TG
- Zou R
- Zwalinski L
- Publication venue
- 'Springer Fachmedien Wiesbaden GmbH'
- Publication date
- 17/02/2021
- Field of study
A search for the supersymmetric partners of quarks and gluons (squarks and gluinos) in final states containing jets and missing transverse momentum, but no electrons or muons, is presented. The data used in this search were recorded by the ATLAS experiment in proton-proton collisions at a centre-of-mass energy of sâ = 13 TeV during Run 2 of the Large Hadron Collider, corresponding to an integrated luminosity of 139 fbâ1. The results are interpreted in the context of various R-parity-conserving models where squarks and gluinos are produced in pairs or in association and a neutralino is the lightest supersymmetric particle. An exclusion limit at the 95% confidence level on the mass of the gluino is set at 2.30 TeV for a simplified model containing only a gluino and the lightest neutralino, assuming the latter is massless. For a simplified model involving the strong production of mass-degenerate first- and second-generation squarks, squark masses below 1.85 TeV are excluded if the lightest neutralino is massless. These limits extend substantially beyond the region of supersymmetric parameter space excluded previously by similar searches with the ATLAS detector
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