7th Drug hypersensitivity meeting: part two

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The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability

Chromobacterium violaceum is one of millions of species of free-living microorganisms that populate the soil and water in the extant areas of tropical biodiversity around the world. Its complete genome sequence reveals (i) extensive alternative pathways for energy generation, (ii) ≈500 ORFs for transport-related proteins, (iii) complex and extensive systems for stress adaptation and motility, and (iv) wide-spread utilization of quorum sensing for control of inducible systems, all of which underpin the versatility and adaptability of the organism. The genome also contains extensive but incomplete arrays of ORFs coding for proteins associated with mammalian pathogenicity, possibly involved in the occasional but often fatal cases of human C. violaceum infection. There is, in addition, a series of previously unknown but important enzymes and secondary metabolites including paraquat-inducible proteins, drug and heavy-metal-resistance proteins, multiple chitinases, and proteins for the detoxification of xenobiotics that may have biotechnological applications

Rising rural body-mass index is the main driver of the global obesity epidemic in adults

Body-mass index (BMI) has increased steadily in most countries in parallel with a rise in the proportion of the population who live in cities 1,2 . This has led to a widely reported view that urbanization is one of the most important drivers of the global rise in obesity 3�6 . Here we use 2,009 population-based studies, with measurements of height and weight in more than 112 million adults, to report national, regional and global trends in mean BMI segregated by place of residence (a rural or urban area) from 1985 to 2017. We show that, contrary to the dominant paradigm, more than 55 of the global rise in mean BMI from 1985 to 2017�and more than 80 in some low- and middle-income regions�was due to increases in BMI in rural areas. This large contribution stems from the fact that, with the exception of women in sub-Saharan Africa, BMI is increasing at the same rate or faster in rural areas than in cities in low- and middle-income regions. These trends have in turn resulted in a closing�and in some countries reversal�of the gap in BMI between urban and rural areas in low- and middle-income countries, especially for women. In high-income and industrialized countries, we noted a persistently higher rural BMI, especially for women. There is an urgent need for an integrated approach to rural nutrition that enhances financial and physical access to healthy foods, to avoid replacing the rural undernutrition disadvantage in poor countries with a more general malnutrition disadvantage that entails excessive consumption of low-quality calories. © 2019, The Author(s)

A century of trends in adult human height

Being taller is associated with enhanced longevity, and higher education and earnings. We reanalysed 1472 population-based studies, with measurement of height on more than 18.6 million participants to estimate mean height for people born between 1896 and 1996 in 200 countries. The largest gain in adult height over the past century has occurred in South Korean women and Iranian men, who became 20.2 cm (95% credible interval 17.5-22.7) and 16.5 cm (13.3-19.7) taller, respectively. In contrast, there was little change in adult height in some sub-Saharan African countries and in South Asia over the century of analysis. The tallest people over these 100 years are men born in the Netherlands in the last quarter of 20th century, whose average heights surpassed 182.5 cm, and the shortest were women born in Guatemala in 1896 (140.3 cm; 135.8-144.8). The height differential between the tallest and shortest populations was 19-20 cm a century ago, and has remained the same for women and increased for men a century later despite substantial changes in the ranking of countries

Diversidade genética de Chenopodium ambrosioides da região cacaueira da Bahia com base em marcadores RAPD Genetic diversity based on RAPD markers of Chenopodium ambrosioides from the cocoa region of Bahia State, Brazil

Chenopodium ambrosioides L., conhecida no Brasil por suas propriedades medicinais e usada principalmente para o controle de verminoses intestinais, é pouco estudada quanto à diversidade genética. O objetivo deste trabalho foi avaliar a diversidade genética de 16 indivíduos de C. ambrosioides, provenientes de diferentes municípios da região cacaueira da Bahia, pela técnica de RAPD (DNA polimórfico amplificado ao acaso). Apenas 6,9% das 216 bandas RAPD amplificadas foram polimórficas e a análise de agrupamento evidenciou que não há formação de grupos por área de coleta. Portanto, há pequena variabilidade entre os materiais e esta variabilidade encontra-se distribuída entre as regiões amostradas.<br>Chenopodium ambrosioides L. is known in many parts of Brazil for its medicinal properties, mainly used to control intestinal worms. Its genetic diversity is little studied. The objective of this work was to evaluate the genetic variability of 16 accessions of C. ambrosioides from the cocoa region of Bahia State, Brazil, by the RAPD technique (Random Amplified Polymorphic DNA). Only 6.9% of the 216 amplified RAPD bands were polymorphic and the pattern of dispersion of individuals showed no clustering related to sample site. Therefore, there is low variability among accessions and it is distributed among the accessions from the entire sampled region

Cruzamento dialélico parcial entre variedades locais do Paraná e variedades sintéticas de milho Partial dialell cross between landraces from Paraná and synthetic varieties of maize

Os objetivos deste trabalho foram determinar as capacidades geral e específica de combinação entre variedades locais e sintéticas de milho e identificar cruzamentos que reúnam características de interesse agronômico, com vistas à síntese de variedades. O dialelo parcial foi realizado com 11 variedades sintéticas cruzadas com cinco variedades locais do Paraná. As combinações híbridas resultantes foram avaliadas juntamente com as cinco variedades locais genitoras e com cinco híbridos comerciais, em blocos completos ao acaso com quatro repetições, em São João do Triunfo e Londrina, PR. Houve interação genótipo x local para a maioria dos caracteres avaliados, com predominância da interação da capacidade geral de combinação x local. As melhores estimativas de capacidade geral de combinação do grupo dos sintéticos foram observadas para ST09 e ST04 e, no grupo das variedades, para MC45 e IAPAR 50, considerando-se o conjunto das características e de locais. As melhores combinações híbridas (MC34 x ST04, IAPAR 50 x ST07, MC47 x ST09, MC45 x ST02, MC51 x ST04 e MC45 x ST01) apresentaram estimativas positivas de capacidade específica de combinação quanto à produtividade, em ambos os locais. Existem combinações híbridas com potencial para síntese de novas variedades com padrões de produtividade, altura de planta, posição relativa da espiga e percentagem de espigas danificadas e de plantas acamadas e quebradas melhores que os observados em variedades locais per se e mais semelhantes aos dos híbridos comerciais.<br>The objectives of this work were to determine the general and specific combining ability between landraces and synthetic varieties of maize and to identify the crosses that combine important agronomic traits, to develop new maize varieties. A partial diallel was done with 11 synthetic varieties crossed with five landraces. The crosses were evaluated along with the five parental landraces and five commercial hybrids, in randomized complete block design, with four replicates, in São João do Triunfo and Londrina, PR, Brazil. There was genotype x location interaction for most characters, predominantly from the general combining ability x location interaction. The best estimates of general combining ability of the synthetic group were observed for ST09 and ST04 and, in the variety group, for MC45 and IAPAR 50, taking into consideration the set of traits and locals. The bests crosses (MC34 x ST04, IAPAR 50 x ST07, MC47 x ST09, MC45 x ST02, MC51 x ST04, and MC45 x ST01) had positive estimates of specific combining ability for grain yield in both locals. There are crosses with potential to develop new maize varieties with better grain yield, plant height, ear position, percentage of damaged ears and of lodging and broken stalks than individual maize landraces, and more similar to the performance of commercial corn hybrids

Comparative validation using quantitative real-time PCR (qPCR) and conventional PCR of bovine semen centrifuged in continuous density gradient

The objective of the present study was to determine the sperm enrichment with X-bearing spermatozoa, after one centrifugation in a Percoll or OptiPrep continuous density gradient, using quantitative real-time polymerase chain reaction (qPCR) of sperm DNA and resultant in vitro-produced bovine embryos by PCR. Frozen/thawed sperm was layered on density gradients and the tubes were centrifuged. Supernatants were gently aspirated and the sperm recovered from the bottom of the tubes. Cleavage and blastocyst rates were determined through in vitro production of embryos and PCR was performed to identify the embryos' genetic sex. A difference in blastocyst rate was found in the Percoll treatment compared to OptiPrep (P<0.05). The percentage of female embryos in the Percoll and OptiPrep groups was 62.0% and 47.1%, respectively. These results were confirmed by qPCR of spermatozoa DNA and underestimation was seen only in the Percoll group. It was possible to sexing sperm using simple approach