Boosting the Battery Life of Wearables for Health Monitoring Through the Compression of Biosignals

Modern wearable Internet of Things (IoT) devices enable the monitoring of vital parameters such as heart or respiratory (RESP) rates, electrocardiography (ECG), photo-plethysmographic (PPG) signals within e-health applications. A common issue of wearable technology is that signal transmission is power-demanding and, as such, devices require frequent battery charges and this poses serious limitations to the continuous monitoring of vitals. To ameliorate this, we advocate the use of lossy signal compression as a means to decrease the data size of the gathered biosignals and, in turn, boost the battery life of wearables and allow for fine-grained and long-term monitoring. Considering 1-D biosignals such as ECG, RESP, and PPG, which are often available from commercial wearable IoT devices, we provide a thorough review of existing biosignal compression algorithms. Besides, we present novel approaches based on online dictionaries, elucidating their operating principles and providing a quantitative assessment of compression, reconstruction and energy consumption performance of all schemes. As we quantify, the most efficient schemes allow reductions in the signal size of up to 100 times, which entail similar reductions in the energy demand, by still keeping the reconstruction error within 4% of the peak-to-peak signal amplitude. Finally, avenues for future research are discussed. © 2014 IEEE

Potential erosion capacity of gravity currents created by changing initial conditions

We investigate to what extent the initial conditions (in terms of buoyancy and geometry) of saline gravity currents flowing over a horizontal bottom influence their runout and entrainment capacity. In particular, to what extent the effect of the introduction of an inclined channel reach, just upstream from the lock gate, influences the hydrodynamics of gravity currents and consequently its potential erosion capacity is still an open question. The investigation presented herein focuses on the unknown effects of an inclined lock on the geometry of the current, on the streamwise velocity, on bed shear stress, and on the mechanisms of entrainment and mass exchange. Gravity currents were reproduced in the laboratory through the lock-exchange technique, and systematic tests were performed with different initial densities, combined with five initial volumes of release on horizontal and sloped locks. The inclination of the upstream reach of the channel (the lock) was varied from 0&thinsp;% to 16&thinsp;%, while the lock length was reduced by up to 1∕4 of the initial reference case. We observed that the shape of the current is modified due to the enhanced entrainment of ambient water, which is the region of the current in which this happens most. A counterintuitive relation between slope and mean streamwise velocity was found, supporting previous findings that hypothesized that gravity currents flowing down small slopes experience an initial acceleration followed by a deceleration. For the steepest slope tested, two opposite mechanisms of mass exchange are identified and discussed, i.e., the current entrainment of water from the upper surface due to the enhanced friction at the interface and the head feeding by a rear-fed current. The bed shear stress and the corresponding potential erosion capacity are discussed, giving insights into the geomorphological implications of natural gravity currents caused in different topographic settings.</p

Phenotypic Variation and Bistable Switching in Bacteria

Microbial research generally focuses on clonal populations. However, bacterial cells with identical genotypes frequently display different phenotypes under identical conditions. This microbial cell individuality is receiving increasing attention in the literature because of its impact on cellular differentiation, survival under selective conditions, and the interaction of pathogens with their hosts. It is becoming clear that stochasticity in gene expression in conjunction with the architecture of the gene network that underlies the cellular processes can generate phenotypic variation. An important regulatory mechanism is the so-called positive feedback, in which a system reinforces its own response, for instance by stimulating the production of an activator. Bistability is an interesting and relevant phenomenon, in which two distinct subpopulations of cells showing discrete levels of gene expression coexist in a single culture. In this chapter, we address techniques and approaches used to establish phenotypic variation, and relate three well-characterized examples of bistability to the molecular mechanisms that govern these processes, with a focus on positive feedback.

The Nuclear Protein Sge1 of Fusarium oxysporum Is Required for Parasitic Growth

Dimorphism or morphogenic conversion is exploited by several pathogenic fungi and is required for tissue invasion and/or survival in the host. We have identified a homolog of a master regulator of this morphological switch in the plant pathogenic fungus Fusarium oxysporum f. sp. lycopersici. This non-dimorphic fungus causes vascular wilt disease in tomato by penetrating the plant roots and colonizing the vascular tissue. Gene knock-out and complementation studies established that the gene for this putative regulator, SGE1 (SIX Gene Expression 1), is essential for pathogenicity. In addition, microscopic analysis using fluorescent proteins revealed that Sge1 is localized in the nucleus, is not required for root colonization and penetration, but is required for parasitic growth. Furthermore, Sge1 is required for expression of genes encoding effectors that are secreted during infection. We propose that Sge1 is required in F. oxysporum and other non-dimorphic (plant) pathogenic fungi for parasitic growth

N-Acetylglucosamine Induces White to Opaque Switching, a Mating Prerequisite in Candida albicans

To mate, the fungal pathogen Candida albicans must undergo homozygosis at the mating-type locus and then switch from the white to opaque phenotype. Paradoxically, opaque cells were found to be unstable at physiological temperature, suggesting that mating had little chance of occurring in the host, the main niche of C. albicans. Recently, however, it was demonstrated that high levels of CO2, equivalent to those found in the host gastrointestinal tract and select tissues, induced the white to opaque switch at physiological temperature, providing a possible resolution to the paradox. Here, we demonstrate that a second signal, N-acetylglucosamine (GlcNAc), a monosaccharide produced primarily by gastrointestinal tract bacteria, also serves as a potent inducer of white to opaque switching and functions primarily through the Ras1/cAMP pathway and phosphorylated Wor1, the gene product of the master switch locus. Our results therefore suggest that signals produced by bacterial co-members of the gastrointestinal tract microbiota regulate switching and therefore mating of C. albicans

Differential Phagocytosis of White versus Opaque Candida albicans by Drosophila and Mouse Phagocytes

The human fungal pathogen Candida albicans resides asymptomatically in the gut of most healthy people but causes serious invasive diseases in immunocompromised patients. Many C. albicans strains have the ability to stochastically switch between distinct white and opaque cell types, but it is not known with certainty what role this switching plays in the physiology of the organism. Here, we report a previously undescribed difference between white and opaque cells, namely their interaction with host phagocytic cells. We show that both Drosophila hemocyte-derived S2 cells and mouse macrophage-derived RAW264.7 cells preferentially phagocytose white cells over opaque cells. This difference is seen both in the overall percentage of cultured cells that phagocytose white versus opaque C. albicans and in the average number of C. albicans taken up by each phagocytic cell. We conclude that susceptibility to phagocytosis by cells of the innate immune system is an important distinction between white and opaque C. albicans, and propose that one role of switching from the prevalent white form into the rarer opaque form may be to allow C. albicans to escape phagocytosis