Alien Registration- Mione, Maria M. (Portland, Cumberland County)

https://digitalmaine.com/alien_docs/23376/thumbnail.jp

Alien Registration- Mione, Maria M. (Portland, Cumberland County)

https://digitalmaine.com/alien_docs/23376/thumbnail.jp

Automated phenotype pattern recognition of zebrafish for high-throughput screening

Over the last years, the zebrafish (Danio rerio) has become a key model organism in genetic and chemical screenings. A growing number of experiments and an expanding interest in zebrafish research makes it increasingly essential to automatize the distribution of embryos and larvae into standard microtiter plates or other sample holders for screening, often according to phenotypical features. Until now, such sorting processes have been carried out by manually handling the larvae and manual feature detection. Here, a prototype platform for image acquisition together with a classification software is presented. Zebrafish embryos and larvae and their features such as pigmentation are detected automatically from the image. Zebrafish of 4 different phenotypes can be classified through pattern recognition at 72 h post fertilization (hpf), allowing the software to classify an embryo into 2 distinct phenotypic classes: wild-type versus variant. The zebrafish phenotypes are classified with an accuracy of 79–99% without any user interaction. A description of the prototype platform and of the algorithms for image processing and pattern recognition is presented

Estimation of User's Orientation via Wearable UWB

User's orientation in indoor environments is an important part of her context. Orientation can be useful to understand what the user is looking at, and thus to improve the interaction between her and the surrounding environment. In this paper, we present a method based on wearable UWB-enabled devices. The position of the devices in space is used to estimate the user's orientation. We experimentally evaluated the impact of some operational parameters, such as the distance between worn devices, or some environmental conditions, such as the position of the user in the room. Results show that the accuracy of the method suits the needs of a wide range of practical purposes

How neuronal migration contributes to the morphogenesis of the CNS: insights from the zebrafish

We used transgenic zebrafish expressing GFP or YFP in subpopulations of neurons to study the migration, homing process and axon extension of groups of CNS neurons in different regions of the zebrafish brain. We found that extensive migration takes place at all levels of the CNS and gives rise to nuclei or cell populations with specific identities. Here, we describe 4 previously unknown or only partially characterized migratory events taking place in the zebrafish telencephalon and rhombic lip, using 3 different transgenic lines, and identify the phenotypes of the cells undertaking these migrations. The migration of a subgroup of mitral cell precursors from the dorsocaudal telencephalon to the olfactory bulb, visualized in the tg(tbr1:YFP) transgenic line, is coupled with morphogenetic transformation of the dorsal telencephalon. The tg(1.4dlx5a-6a:GFP) transgenic line provides a means to analyze the migration of GABAergic interneurons from the ventral to the dorsal telencephalon, thus extending the occurrence of this migration to another vertebrate. The tg(Xeom:GFP) transgenic line provides the first demonstration of the dorsoventral migration of glutamatergic septal neurons, present in mammals and now described in fish, thus reconciling the contrasting evidence of dorsal patterning genes (tbr1, eomes) expressed in a ventral cell population. Furthermore, migration studies in the tg(1.4dlx5a-6a:GFP) and tg(Xeom:GFP) lines help determine the origin of 2 important cell populations in the fish cerebellum: projection neurons and Purkinje cells. These examples reinforce the concept that migratory events contribute to the distribution of cell types with diverse identities through the CNS and that zebrafish transgenic lines represent excellent tools to study these events. Copyrigh

Coloured nectar: distribution, ecology, and evolution of an enigmatic floral trait

While coloured nectar has been known to science at least since 1785, it has only recently received focused scientific attention. However, information about this rare floral trait is scattered and hard to find. Here, we document coloured nectar in 67 taxa worldwide, with a wide taxonomical and geographical distribution. We summarise what is currently known about coloured nectar in each of the lineages where it occurs. The most common nectar colours are in the spectrum from yellow to red, but also brown, black, green, and blue colours are found. Colour intensity of the nectar varies, sometimes even within one taxa, as does the level of contrast between flower petals and nectar. Coloured nectar has evolved independently throughout the angiosperms at least 15 times at the level of family, and is in many cases correlated with one or more of three parameters: (1) vertebrate pollination, known or hypothesised, (2) insularity -- many species are from islands or insular mainland habitats, and (3) altitude -- many species are found at relatively high altitudes. We discuss the evolution and speculate on possible ecological functions of coloured nectar. Apart from being a non-functional, perhaps pleiotropic, trait, we present several hypotheses on possible ecological functions of coloured nectar. Firstly, for some plant species it can be interpreted as an honest signal, leading to high pollination efficiency. Secondly, it can function as a deterrent against nectar-thieves or inefficient pollinators, thus acting as a floral filter. Thirdly, nectar colour-pigments can have anti-microbial qualities that may protect the nectar in long-lived flowers. Neither of these possibilities are mutually exclusive. Recent studies have provided experimental evidence for the first two hypotheses, and we suggest promising avenues for future research into this little-known floral trait

Kita Driven Expression of Oncogenic HRAS Leads to Early Onset and Highly Penetrant Melanoma in Zebrafish

Melanoma is the most aggressive and lethal form of skin cancer. Because of the increasing incidence and high lethality of melanoma, animal models for continuously observing melanoma formation and progression as well as for testing pharmacological agents are needed.Using the combinatorial Gal4-UAS system, we have developed a zebrafish transgenic line that expresses oncogenic HRAS under the kita promoter. Already at 3 days transgenic kita-GFP-RAS larvae show a hyper-pigmentation phenotype as earliest evidence of abnormal melanocyte growth. By 2-4 weeks, masses of transformed melanocytes form in the tail stalk of the majority of kita-GFP-RAS transgenic fish. The adult tumors evident between 1-3 months of age faithfully reproduce the immunological, histological and molecular phenotypes of human melanoma, but on a condensed time-line. Furthermore, they show transplantability, dependence on mitfa expression and do not require additional mutations in tumor suppressors. In contrast to kita expressing melanocyte progenitors that efficiently develop melanoma, mitfa expressing progenitors in a second Gal4-driver line were 4 times less efficient in developing melanoma during the three months observation period.This indicates that zebrafish kita promoter is a powerful tool for driving oncogene expression in the right cells and at the right level to induce early onset melanoma in the presence of tumor suppressors. Thus our zebrafish model provides a link between kita expressing melanocyte progenitors and melanoma and offers the advantage of a larval phenotype suitable for large scale drug and genetic modifier screens