The Effect of Urbanization on Bumble Bee Communities in Greater Philadelphia

Bumble bees (Bombus spp.) are among the most important wild pollinators in temperate ecosystems in North America and Europe, and are believed to be vital to the functioning of the pollination networks in which they occur. Accordingly, evidence of their overall decline in Europe and more selective decline in the U.S. has raised concern about the long term persistence of many species. Human-induced changes in land use, including the loss of natural and semi-natural habitat and associated floral resources, are purported causes in several cases. Declines prompted an investigation of this potential trend in the urbanized landscape in and surrounding Philadelphia, PA. We surveyed the species richness and abundance of bumble bee communities in ten half-ha plots located in restored, managed meadows along a gradient of urban and suburban development in the Philadelphia metropolitan area from June 1 to August 15, 2006. In conjunction with collections, we measured floral density within each plot. We calculated the proportion of developed land at differing spatial scales ranging from 500 to 4000 m from survey sites. General linear models were used to test the effect of developed land, local meadow size, and floral resource density on overall bumble bee species richness and abundance. 
Development did not have any detectable effect on species richness at any tested spatial scale. Bee abundance was best explained by a model that included the proportion of developed land at the 2500 m scale. In contrast to our expectations, total bumble bee abundance was significantly higher in plots with a higher proportion of developed land surrounding the site (F1,5 = 8.13, P = 0.04). Local floral density did not significantly affect richness or abundance (F 1,5 = 0.93, P = 0.34), nor was local resource quality associated with development (r = 0.52, P = 0.12) . We hypothesize that gardens maintained in urban and suburban landscapes may provide an important and consistent food supply to bumble bees throughout the duration of their colony cycle. Forested habitats, which were the other dominate habitat type, may actually be relatively poor in bumble bee resources following closure of the canopy in late spring. This research indicates that restored meadows are excellent habitat for bumble bees and may promote pollination services in urbanized settings.
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SBML Reaction Finder: Retrieve and extract specific reactions from the BioModels database

Summary: The SBML Reaction Finder (SRF) application leverages the deep semantic annotations in the BioModels database to provide efficient retrieval and extraction of individual reactions from SBML models. We hope that the SRF will be useful to quantitative modelers who seek to accelerate their modeling efforts by reusing previously published representations of specific chemical reactions.

Availability and Implementation: The SRF is open source, coded in Java, and distributed under the Mozilla Pubic License Version 1.1. Windows, Macintosh and Linux distributions are available for download at 
http://sourceforge.net/projects/sbmlrxnfinder.
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Turbulent skin friction and heat-transfer charts adapted from the Spalding and Chi method

Local and average skin friction and heat transfer on flat plates in air - chart

Calcium Exerts a Strong Influence upon Phosphohydrolase Gene Abundance and Phylogenetic Diversity in Soil

The mechanisms by which microbial communities maintain functions within the context of changing environments are key to a wide variety of environmental processes. In soil, these mechanisms support fertility. Genes associated with hydrolysis of organic phosphoesters represent an interesting set of genes with which to study maintainance of function in microbiomes, since they participate in the same process and so in many respects are interchangeable. Here, we shown that the richness of ecotypes for each gene varies considerably in response to organic manuring and various inorganic fertilizer combinations . We show, at unprecedented phylogenetic resolution, that phylogenetic diversity of phosphohydrolase genes are more responsive to soil management and edaphic factors than the taxonomic biomarker 16S rRNA gene. Available phosphorus exerted no significant influence on gene distribution: instead we observed gene niche separation according to soil pH and exchangeable calcium. We infer a degree of competition between genes, ensuring that a gene most optimally adapted to the prevailing edaphic factors spreads through the population, thus maintaining microbiome function

Body camera footage leads to lower judgments of intent than dash camera footage.

Police departments use body-worn cameras (body cams) and dashboard cameras (dash cams) to monitor the activity of police officers in the field. Video from these cameras informs review of police conduct in disputed circumstances, often with the goal of determining an officer's intent. Eight experiments (N = 2,119) reveal that body cam video of an incident results in lower observer judgments of intentionality than dash cam video of the same incident, an effect documented with both scripted videos and real police videos. This effect was due, in part, to variation in the visual salience of the focal actor: the body cam wearer is typically less visually salient when depicted in body versus dash cam video, which corresponds with lower observer intentionality judgments. In showing how visual salience of the focal actor may introduce unique effects on observer judgment, this research establishes an empirical platform that may inform public policy regarding surveillance of police conduct

The Spitzer c2d Survey of Nearby Dense Cores. IX. Discovery of a Very Low Luminosity Object Driving a Molecular Outflow in the Dense Core L673-7

We present new infrared, submillimeter, and millimeter observations of the dense core L673-7 and report the discovery of a low-luminosity, embedded Class 0 protostar driving a molecular outflow. L673-7 is seen in absorption against the mid-infrared background in 5.8, 8, and 24 micron Spitzer images, allowing for a derivation of the column density profile and total enclosed mass of L673-7, independent of dust temperature assumptions. Estimates of the core mass from these absorption profiles range from 0.2-4.5 solar masses. Millimeter continuum emission indicates a mass of about 2 solar masses, both from a direct calculation assuming isothermal dust and from dust radiative transfer models constrained by the millimeter observations. We use dust radiative transfer models to constrain the internal luminosity of L673-7, defined to be the luminosity of the central source and excluding the luminosity from external heating, to be 0.01-0.045 solar luminosities, with 0.04 solar luminosities the most likely value. L673-7 is thus classified as a very low luminosity object (VeLLO), and is among the lowest luminosity VeLLOs yet studied. We calculate the kinematic and dynamic properties of the molecular outflow in the standard manner, and we show that the expected accretion luminosity based on these outflow properties is greater than or equal to 0.36 solar luminosities. The discrepancy between this expected accretion luminosity and the internal luminosity derived from dust radiative transfer models indicates that the current accretion rate is much lower than the average rate over the lifetime of the outflow. Although the protostar embedded within L673-7 is consistent with currently being substellar, it is unlikely to remain as such given the substantial mass reservoir remaining in the core.Comment: 19 pages, 14 figures. Accepted by Ap

Long-term changes in the water quality of rainfall, cloud water and stream water for moorland, forested and clear-felled catchments at Plynlimon, mid-Wales

Long term changes in the water quality of rainfall, cloud water and stream waters draining acidic and acid sensitive moorland and forested catchments at Plynlimon, mid-Wales, are examined for the period 1983 to 2001. Atmospheric inputs of chloride and sulphate are influenced by the relative inputs of clean maritime and polluted land based air masses. There is no systematic increase or decrease over time for chloride and non-sea-salt sulphate. Rather, there is a decadal scale process possibly representative of the influence of the North Atlantic Oscillation that affects the maritime and pollution climate of the Atlantic seaboard of the UK. Over 17 years of study, there may be a small decrease in non-sea-salt sulphate of about 10 &#956;eq l^-1 and a small improvement in acid neutralising capacity of about 20 to 30 &#956;eq l^-1 in rainfall. There is a clear improvement in cloud water chemistry with respect to pollutant components (ammonium, nitrate, non-sea-salt sulphate) and acidity (acid neutralising capacity improved by about 300 &#956;eq l^-1) through the study period. Many of the changes in cloud water chemistry are similar to rainfall over the same period except the magnitude of change is larger for the cloud water. Within the streams, there is some evidence for reductions in acidity as reflected by acid neutralising capacity becoming less negative. For one stream, deforestation occurred during the sampling period and this led to large increases in nitrate and smaller increases in aluminium midway through the study period. However, the climate and hydrological variability largely masked out other changes. The current analysis provides only a start to identifying trends for such a complex and variable environmental system. The need for strong statistical tools is emphasised to resolve issues of: (a) hydrological induced water quality variability, (b) changing soil and groundwater &quot;endmember&quot; chemistry contribution to the stream and (c) the non-linear patterns of change. Nonetheless, the analysis is enhanced by examining trends in chemistry for yearly averages and yearly average low catch and high catch rainfall and cloud water events as well as low and high flow stream chemistry. This approach allows trends to be examined within the context of endmember mixing.</p> <p style='line-height: 20px;'><b>Keywords: </b>Calcium, aluminium, ammonium, pH, Gran alkalinity, ANC, nitrate, chloride, sulphate, Plynlimon, cloud, mist, rainfall, stream, acidification, North Atlantic Oscillation, trend

Automatic Tip Vortex Core Profiling for Numerical Flow Simulations of Rotorcraft in Hover

An automated approach is presented that extracts visual and quantitative data from vortex cores produced by Navier-Stokes simulations of rotorcraft in hover mode. This approach extracts contiguous rotor tip vortex-core trajectories, cross-flow velocity profiles, and vortex-core diameter variation with wake age (azimuth angle). This automated approach is faster and more accurate than a conventional manual approach. Moreover, this new approach allows for an efficient way to quantitatively compare vortex-core profiles from different flow simulations, e.g., grid resolution studies, and validate computed results with experimental dat

The impact of conifer harvesting on stream water quality: the Afon Hafren, mid-Wales

International audienceResults for long term water quality monitoring are described for the headwaters of the principal headwater stream of the River Severn, the Afon Hafren. The results are linked to within-catchment information to describe the influence of conifer harvesting on stream and shallow groundwater quality. A 19-year record of water quality data for the Hafren (a partially spruce forested catchment with podzolic soil) shows the classic patterns of hydrochemical change in relation to concentration and flow responses for upland forested systems. Progressive felling of almost two-thirds of the forest over the period of study resulted in little impact from harvesting and replanting in relation to stream water quality. However, at the local scale, a six years' study of felling indicated significant release of nitrate into both surface and groundwater; this persisted for two or three years before declining. The study has shown two important features. Firstly, phased felling has led to minimal impacts on stream water. This contrasts with the results of an experimental clear fell for the adjacent catchment of the Afon Hore where a distinct water quality deterioration was observed for a few years. Secondly, there are localised zones with varying hydrology that link to groundwater sources with fracture flow properties. This variability makes extrapolation to the catchment scale difficult without very extensive monitoring. The implications of these findings are discussed in relation to strong support for the use of phased felling-based management of catchments and the complexities of within catchment processes. Keywords: deforestation, water quality, acidification, pH, nitrate, alkalinity, ANC, aluminium, dissolved organic carbon, Plynlimon, forest, spruce, Afon Hafren, podzo