Path-integral representation for a stochastic sandpile

We introduce an operator description for a stochastic sandpile model with a conserved particle density, and develop a path-integral representation for its evolution. The resulting (exact) expression for the effective action highlights certain interesting features of the model, for example, that it is nominally massless, and that the dynamics is via cooperative diffusion. Using the path-integral formalism, we construct a diagrammatic perturbation theory, yielding a series expansion for the activity density in powers of the time.Comment: 22 pages, 6 figure

Absorbing-state phase transitions with extremal dynamics

Extremal dynamics represents a path to self-organized criticality in which the order parameter is tuned to a value of zero. The order parameter is associated with a phase transition to an absorbing state. Given a process that exhibits a phase transition to an absorbing state, we define an ``extremal absorbing" process, providing the link to the associated extremal (nonabsorbing) process. Stationary properties of the latter correspond to those at the absorbing-state phase transition in the former. Studying the absorbing version of an extremal dynamics model allows to determine certain critical exponents that are not otherwise accessible. In the case of the Bak-Sneppen (BS) model, the absorbing version is closely related to the "$f$-avalanche" introduced by Paczuski, Maslov and Bak [Phys. Rev. E {\bf 53}, 414 (1996)], or, in spreading simulations to the "BS branching process" also studied by these authors. The corresponding nonextremal process belongs to the directed percolation universality class. We revisit the absorbing BS model, obtaining refined estimates for the threshold and critical exponents in one dimension. We also study an extremal version of the usual contact process, using mean-field theory and simulation. The extremal condition slows the spread of activity and modifies the critical behavior radically, defining an ``extremal directed percolation" universality class of absorbing-state phase transitions. Asymmetric updating is a relevant perturbation for this class, even though it is irrelevant for the corresponding nonextremal class.Comment: 24 pages, 11 figure

Asymptotic behavior of the order parameter in a stochastic sandpile

We derive the first four terms in a series for the order paramater (the stationary activity density rho) in the supercritical regime of a one-dimensional stochastic sandpile; in the two-dimensional case the first three terms are reported. We reorganize the pertubation theory for the model, recently derived using a path-integral formalism [R. Dickman e R. Vidigal, J. Phys. A 35, 7269 (2002)], to obtain an expansion for stationary properties. Since the process has a strictly conserved particle density p, the Fourier mode N^{-1} psi_{k=0} -> p, when the number of sites N -> infinity, and so is not a random variable. Isolating this mode, we obtain a new effective action leading to an expansion for rho in the parameter kappa = 1/(1+4p). This requires enumeration and numerical evaluation of more than 200 000 diagrams, for which task we develop a computational algorithm. Predictions derived from this series are in good accord with simulation results. We also discuss the nature of correlation functions and one-site reduced densities in the small-kappa (large-p) limit.Comment: 18 pages, 5 figure

Sandpiles with height restrictions

We study stochastic sandpile models with a height restriction in one and two dimensions. A site can topple if it has a height of two, as in Manna's model, but, in contrast to previously studied sandpiles, here the height (or number of particles per site), cannot exceed two. This yields a considerable simplification over the unrestricted case, in which the number of states per site is unbounded. Two toppling rules are considered: in one, the particles are redistributed independently, while the other involves some cooperativity. We study the fixed-energy system (no input or loss of particles) using cluster approximations and extensive simulations, and find that it exhibits a continuous phase transition to an absorbing state at a critical value zeta_c of the particle density. The critical exponents agree with those of the unrestricted Manna sandpile.Comment: 10 pages, 14 figure

Proline Biosynthesis Is Required for Endoplasmic Reticulum Stress Tolerance in \u3ci\u3eSaccharomyces cerevisiae\u3c/i\u3e

Background: Proline is an important amino acid for stress resistance in different organisms. Results: Depletion of proline biosynthesis disrupts redox homeostasis and increases sensitivity to endoplasmic reticulum (ER) stress in yeast. Conclusion: Proline biosynthesis is critical for maintaining the intracellular redox environment and the UPR during ER stress. Significance: Proline metabolism is shown to have an important role in ER stress tolerance that was previously unknown

Activated Random Walkers: Facts, Conjectures and Challenges

We study a particle system with hopping (random walk) dynamics on the integer lattice $\mathbb Z^d$. The particles can exist in two states, active or inactive (sleeping); only the former can hop. The dynamics conserves the number of particles; there is no limit on the number of particles at a given site. Isolated active particles fall asleep at rate $\lambda > 0$, and then remain asleep until joined by another particle at the same site. The state in which all particles are inactive is absorbing. Whether activity continues at long times depends on the relation between the particle density $\zeta$ and the sleeping rate $\lambda$. We discuss the general case, and then, for the one-dimensional totally asymmetric case, study the phase transition between an active phase (for sufficiently large particle densities and/or small $\lambda$) and an absorbing one. We also present arguments regarding the asymptotic mean hopping velocity in the active phase, the rate of fixation in the absorbing phase, and survival of the infinite system at criticality. Using mean-field theory and Monte Carlo simulation, we locate the phase boundary. The phase transition appears to be continuous in both the symmetric and asymmetric versions of the process, but the critical behavior is very different. The former case is characterized by simple integer or rational values for critical exponents ($\beta = 1$, for example), and the phase diagram is in accord with the prediction of mean-field theory. We present evidence that the symmetric version belongs to the universality class of conserved stochastic sandpiles, also known as conserved directed percolation. Simulations also reveal an interesting transient phenomenon of damped oscillations in the activity density

On the absorbing-state phase transition in the one-dimensional triplet creation model

We study the lattice reaction diffusion model 3A -> 4A, A -> 0 (``triplet creation") using numerical simulations and n-site approximations. The simulation results provide evidence of a discontinuous phase transition at high diffusion rates. In this regime the order parameter appears to be a discontinuous function of the creation rate; no evidence of a stable interface between active and absorbing phases is found. Based on an effective mapping to a modified compact directed percolation process, shall nevertheless argue that the transition is continuous, despite the seemingly discontinuous phase transition suggested by studies of finite systems.Comment: 23 pages, 11 figure

Kinetic description of avalanching systems

Avalanching systems are treated analytically using the renormalization group (in the self-organized-criticality regime) or mean-field approximation, respectively. The latter describes the state in terms of the mean number of active and passive sites, without addressing the inhomogeneity in their distribution. This paper goes one step further by proposing a kinetic description of avalanching systems making use of the distribution function for clusters of active sites. We illustrate application of the kinetic formalism to a model proposed for the description of the avalanching processes in the reconnecting current sheet of the Earth magnetosphere.Comment: 9 page

Critical Dynamics of the Contact Process with Quenched Disorder

We study critical spreading dynamics in the two-dimensional contact process (CP) with quenched disorder in the form of random dilution. In the pure model, spreading from a single particle at the critical point $\lambda_c$ is characterized by the critical exponents of directed percolation: in $2+1$ dimensions, $\delta = 0.46$, $\eta = 0.214$, and $z = 1.13$. Disorder causes a dramatic change in the critical exponents, to $\delta \simeq 0.60$, $\eta \simeq -0.42$, and $z \simeq 0.24$. These exponents govern spreading following a long crossover period. The usual hyperscaling relation, $4 \delta + 2 \eta = d z$, is violated. Our results support the conjecture by Bramson, Durrett, and Schonmann [Ann. Prob. {\bf 19}, 960 (1991)], that in two or more dimensions the disordered CP has only a single phase transition.Comment: 11 pages, REVTeX, four figures available on reques

Survival-extinction phase transition in a bit-string population with mutation

A bit-string model for the evolution of a population of haploid organisms, subject to competition, reproduction with mutation and selection is studied, using mean field theory and Monte Carlo simulations. We show that, depending on environmental flexibility and genetic variability, the model exhibits a phase transtion between extinction and survival. The mean-field theory describes the infinite-size limit, while simulations are used to study quasi-stationary properties.Comment: 11 pages, 5 figure