Nasopharyngeal Microbiota Profiles in Rural Venezuelan Children Are Associated With Respiratory and Gastrointestinal Infections

BACKGROUND: Recent research suggests that the microbiota affects susceptibility to both respiratory tract infections (RTIs) and gastrointestinal infections (GIIs). In order to optimize global treatment options, it is important to characterize microbiota profiles across different niches and geographic/socioeconomic areas where RTI and GII prevalences are high. METHODS: We performed 16S sequencing of nasopharyngeal swabs from 209 Venezuelan Amerindian children aged 6 weeks-59 months who were participating in a 13-valent pneumococcal conjugate vaccine (PCV13) study. Using random forest models, differential abundance testing, and regression analysis, we determined whether specific bacteria were associated with RTIs or GIIs and variation in PCV13 response. RESULTS: Microbiota compositions differed between children with or without RTIs (P = .018) or GIIs (P = .001). Several species were associated with the absence of infections. Some of these health-associated bacteria are also observed in developed regions, such as Corynebacterium (log2(fold change [FC]) = 3.30 for RTIs and log2(FC) = 1.71 for GIIs), while others are not commonly observed in developed regions, such as Acinetobacter (log2(FC) = 2.82 and log2(FC) = 5.06, respectively). Klebsiella spp. presence was associated with both RTIs (log2(FC) = 5.48) and GIIs (log2(FC) = 7.20). CONCLUSIONS: The nasopharyngeal microbiota of rural Venezuelan children included several bacteria that thrive in tropical humid climates. Interestingly, nasopharyngeal microbiota composition not only differed in children with an RTI but also in those with a GII, which suggests a reciprocal interplay between the 2 environments. Knowledge of region-specific microbiota patterns enables tailoring of preventive and therapeutic approaches

Viininmaistelun alkeet -tapahtuma Maria P:ssä

Tiivistelmä Tekijät: Paananen Riina ja Korkiakoski Merika Työn nimi: Viininmaistelun alkeet -tapahtuma Maria P:ssä Tutkintonimike: Restonomi (AMK), matkailun koulutus Asiasanat: tapahtuma, viini, viininmaistelu, Chile Opinnäytetyön tarkoituksena oli suunnitella ja järjestää Viininmaistelun alkeet -tapahtuma. Tapahtuman toimeksiantajana toimi kajaanilainen yritys Viinibaari Maria P. Tapahtuma haluttiin toteuttaa baarin imagoon sopivaksi. Opinnäytetyön tavoitteena oli saada Viini-baarille lisää asiakkaita tutustuttamalla kokemattomia viininmaistajia viineihin. Työ oli toiminnallinen opinnäytetyö, jonka tuotoksena oli Viininmaistelun alkeet -tapahtuma. Opinnäytetyöhön kerättiin teoriapohjaa viininmaistelusta sekä viinin ja ruoan yhdistämisestä, Chilestä viinimaana ja tapahtuman järjestämisestä. Näitä kaikkia käytettiin lopullisen tuotoksen valmistumiseen. Toteutuksen arviointina toimi tapahtumaan osallistuneilta saatu kirjallinen palaute. Palautteen mukaan kehittämistehtävän toteutuksessa onnistuttiin hyvin, sillä opinnäytetyön ennalta määritellyt tavoitteet saavutettiin. Opinnäytetyötä voidaan käyttää apuna jatkossa vastaavien tapahtumien suunnittelussa.Abstract Authors: Paananen Riina & Korkiakoski Merika Title of the Publication: Basics of wine tasting- event Degree title: Bachelor of Hospitality Management Keywords: event, wine, tasting, Chile The purpose for this thesis was to plan and arrange Basics of wine tasting –event. The commissioner for this thsesis was a local bar in Kajaani called Viinibaari Maria P. The event was planned to suit the imago of the bar. The objective of the thesis was to gain more customers to Viinibaari Maria P by introducing various wines to novice wine tasters. This research was a functional thesis which produced the Basics wine tasting event. The theory of this thesis focused on wine tasting, combining wine and food, Chile as a wine producer, and on planning and arranging an event. The feedback for the execution consists of the feedback forms that the customers of the event were asked to fill in. In addition observation method was used for evaluation. According to the feedback the event was successful because the objective of the thesis was reached. Our conclusion is that this thesis can be used as a guide in planning similar events

A review of the reproductive biology and breeding management of tapirs

Circadian clocks in health and diseas

Ruimtelijke verkenningen: Drie schetsen voor de toekomstige inrichting van Nederland

In opdracht van Wetenschappelijke Raad voor het Regeringsbeleid, Den Haag en Instituut voor Sociale Geografie, Amsterda

Sequencing of the variable region of rpsB to discriminate between Streptococcus pneumoniae and other streptococcal species.

The vast majority of streptococci colonizing the human upper respiratory tract are commensals, only sporadically implicated in disease. Of these, the most pathogenic is Mitis group member, Streptococcus pneumoniae Phenotypic and genetic similarities between streptococci can cause difficulties in species identification. Using ribosomal S2-gene sequences extracted from whole-genome sequences published from 501 streptococci, we developed a method to identify streptococcal species. We validated this method on non-pneumococcal isolates cultured from cases of severe streptococcal disease (n = 101) and from carriage (n = 103), and on non-typeable pneumococci from asymptomatic individuals (n = 17) and on whole-genome sequences of 1157 pneumococcal isolates from meningitis in the Netherlands. Following this, we tested 221 streptococcal isolates in molecular assays originally assumed specific for S. pneumoniae, targeting cpsA, lytA, piaB, ply, Spn9802, zmpC and capsule-type-specific genes. Cluster analysis of S2-sequences showed grouping according to species in line with published phylogenies of streptococcal core genomes. S2-typing convincingly distinguished pneumococci from non-pneumococcal species (99.2% sensitivity, 100% specificity). Molecular assays targeting regions of lytA and piaB were 100% specific for S. pneumoniae, whereas assays targeting cpsA, ply, Spn9802, zmpC and selected serotype-specific assays (but not capsular sequence typing) showed a lack of specificity. False positive results were over-represented in species associated with carriage, although no particular confounding signal was unique for carriage isolates

Streptococcus pneumoniae in saliva of Dutch primary school children

While nasopharyngeal sampling is the gold standard for the detection of Streptococcus pneumoniae carriage, historically seen, saliva sampling also seems highly sensitive for pneumococcal detection. We investigated S. pneumoniae carriage in saliva from fifty schoolchildren by conventional and molecular methods. Saliva was first culture-enriched for pneumococci, after which, DNA was extracted from all bacterial growth and tested by quantitative-PCR (qPCR) for pneumococcus-specific genes lytA and piaA. Next, serotype composition of the samples was determined by serotype-specific qPCRs, conventional-PCRs (cPCR) and sequencing of cPCR amplicons. Although only 2 (4%) of 50 samples were positive by conventional diagnostic culture, 44 (88%) were positive for pneumococci by qPCR. In total, we detected the presence of at least 81 pneumococcal strains representing 20 serotypes in samples from 44 carriers with 23 carriers (52%) positive for multiple (up to 6) serotypes. The number of serotypes detected per sample correlated with pneumococcal abundance. This study shows that saliva could be used as a tool for future pneumococcal surveillance studies. Furthermore, high rates of pneumococcal carriage and co-carriage of multiple pneumococcal strains together with a large number of serotypes in circulation suggests a ubiquitous presence of S. pneumoniae in saliva of school-aged children. Our results also suggest that factors promoting pneumococcal carriage within individual hosts may weaken competitive interactions between S. pneumoniae strain