153 research outputs found
Exact spatio-temporal dynamics of confined lattice random walks in arbitrary dimensions:a century after Smoluchowski and Polya
A lattice random walk is a mathematical representation of movement through random steps on a lattice at discrete times. It is commonly referred to as Pólya’s walk when the steps occur in either of the nearest-neighbor sites. Since Smoluchowski’s 1906 derivation of the spatiotemporal dependence of the walk occupation probability in an unbounded one-dimensional lattice, discrete random walks and their continuous counterpart, Brownian walks, have developed over the course of a century into a vast and versatile area of knowledge. Lattice random walks are now routinely employed to study stochastic processes across scales, dimensions, and disciplines, from the one-dimensional search of proteins along a DNA strand and the two-dimensional roaming of bacteria in a petri dish, to the three-dimensional motion of macromolecules inside cells and the spatial coverage of multiple robots in a disaster area. In these realistic scenarios, when the randomly moving object is constrained to remain within a finite domain, confined lattice random walks represent a powerful modeling tool. Somewhat surprisingly, and differently from Brownian walks, the spatiotemporal dependence of the confined lattice walk probability has been accessible mainly via computational techniques, and finding its analytic description has remained an open problem. Making use of a set of analytic combinatorics identities with Chebyshev polynomials, I develop a hierarchical dimensionality reduction to find the exact space and time dependence of the occupation probability for confined Pólya’s walks in arbitrary dimensions with reflective, periodic, absorbing, and mixed (reflective and absorbing) boundary conditions along each direction. The probability expressions allow one to construct the time dependence of derived quantities, explicitly in one dimension and via an integration in higher dimensions, such as the first-passage probability to a single target, return probability, average number of distinct sites visited, and absorption probability with imperfect traps. Exact mean first-passage time formulas to a single target in arbitrary dimensions are also presented. These formulas allow one to extend the so-called discrete pseudo-Green function formalism, employed to determine analytically mean first-passage time, with reflecting and periodic boundaries, and a wealth of other related quantities, to arbitrary dimensions. For multiple targets, I introduce a procedure to construct the time dependence of the first-passage probability to one of many targets. Reduction of the occupation probability expressions to the continuous time limit, the so-called continuous time random walk, and to the space-time continuous limit is also presented
Comparison of two models of tethered motion
We consider a random walker whose motion is tethered around a focal point. We
use two models that exhibit the same spatial dependence in the steady state but
widely different dynamics. In one case, the walker is subject to a
deterministic bias towards the focal point, while in the other case, it resets
its position to the focal point at random times. The deterministic tendency of
the biased walker makes the forays away from the focal point more unlikely when
compared to the random nature of the returns of the resetting walker. This
difference has consequences on the spatio-temporal dynamics at intermediate
times. To show the differences in the two models, we analyze their probability
distribution and their dynamics in presence and absence of partially or fully
absorbing traps. We derive analytically various quantities: (i) mean
first-passage times to one target, where we recover results obtained earlier by
a different technique, (ii) splitting probabilities to either of two targets as
well as survival probabilities when one or either target is partially
absorbing. The interplay between confinement, diffusion and absorbing traps
produces interesting non-monotonic effects in various quantities, all
potentially accessible in experiments. The formalism developed here may have a
diverse range of applications, from study of animals roaming within home ranges
and of electronic excitations moving in organic crystals to developing
efficient search algorithms for locating targets in a crowded environment.Comment: 26 pages, 7 figure
An anti-symmetric exclusion process for two particles on an infinite 1D lattice
A system of two biased, mutually exclusive random walkers on an infinite 1D
lattice is studied whereby the intrinsic bias of one particle is equal and
opposite to that of the other. The propogator for this system is solved exactly
and expressions for the mean displacement and mean square displacement (MSD)
are found. Depending on the nature of the intrinsic bias, the system's
behaviour displays two regimes, characterised by (i) the particles moving
towards each other and (ii) away from each other, both qualitatively different
from the case of no bias. The continuous-space limit of the propogator is found
and is shown to solve a Fokker-Planck equation for two biased, mutually
exclusive Brownian particles with equal and opposite drift velocity.Comment: 19 pages, 5 figure
Dynamics of lattice random walk within regions composed of different media and interfaces
We study the lattice random walk dynamics in a heterogeneous space of two
media separated by an interface and having different diffusivity and bias.
Depending on the position of the interface, there exist two exclusive ways to
model the dynamics: (1) Type A dynamics whereby the interface is placed between
two lattice points, and (2) Type B dynamics whereby the interface is placed on
a lattice point. For both types, we obtain exact results for the
one-dimensional generating function of the Green's function or propagator for
the composite system in unbounded domain as well as domains confined with
reflecting, absorbing, and mixed boundaries. For the case with reflecting
confinement in the absence of bias, the steady-state probability shows a
step-like behavior for the Type A dynamics, while it is uniform for the Type B
dynamics. We also derive explicit expressions for the first-passage probability
and the mean first-passage time, and compare the hitting time dependence to a
single target. Finally, considering the continuous-space continuous-time limit
of the propagator, we obtain the boundary conditions at the interface. At the
interface, while the flux is the same, the probability density is discontinuous
for Type A and is continuous for Type B. For the latter we derive a generalized
version of the so-called leather boundary condition in the appropriate limit.Comment: Submitted version: 30 pages, 8 figures. Accepted for publication in
J. Stat. Mech.: Theory Ex
Closed-form solutions to the dynamics of confined biased lattice random walks in arbitrary dimensions
Biased lattice random walks (BLRW) are used to model random motion with drift
in a variety of empirical situations in engineering and natural systems such as
phototaxis, chemotaxis or gravitaxis. When motion is also affected by the
presence of external borders resulting from natural barriers or experimental
apparatuses, modelling biased random movement in confinement becomes necessary.
To study these scenarios, confined BLRW models have been employed but so far
only through computational techniques due to the lack of an analytic framework.
Here, we lay the groundwork for such an analytical approach by deriving the
Green's functions, or propagators, for the confined BLRW in arbitrary
dimensions and arbitrary boundary conditions. By using these propagators we
construct explicitly the time dependent first-passage probability in one
dimension for reflecting and periodic domains, while in higher dimensions we
are able to find its generating function. The latter is used to find the mean
first-passage passage time for a -dimensional box, -dimensional torus or
a combination of both. We show the appearance of surprising characteristics
such as the presence of saddles in the spatio-temporal dynamics of the
propagator with reflecting boundaries, bimodal features in the first-passage
probability in periodic domains and the minimisation of the mean first-return
time for a bias of intermediate strength in rectangular domains. Furthermore,
we quantify how in a multi-target environment with the presence of a bias
shorter mean first-passage times can be achieved by placing fewer targets close
to boundaries in contrast to many targets away from them
Extreme Value Statistics and Arcsine Laws of Brownian Motion in the Presence of a Permeable Barrier
The Arcsine laws of Brownian motion are a collection of results describing
three different statistical quantities of one-dimensional Brownian motion: the
time at which the process reaches its maximum position, the total time the
process spends in the positive half-space and the time at which the process
crosses the origin for the last time. Remarkably the cumulative probabilities
of these three observables all follows the same distribution, the Arcsine
distribution. But in real systems, space is often heterogeneous, and these laws
are likely to hold no longer. In this paper we explore such a scenario and
study how the presence of a spatial heterogeneity alters these Arcsine laws.
Specifically we consider the case of a thin permeable barrier, which is often
employed to represent diffusion impeding heterogeneities in physical and
biological systems such as multilayer electrodes, electrical gap junctions,
cell membranes and fragmentation in the landscape for dispersing animals. Using
the Feynman-Kac formalism and path decomposition techniques we are able to find
the exact time-dependence of the probability distribution of the three
statistical quantities of interest. We show that a permeable barrier has a
large impact on these distributions at short times, but this impact is less
influential as time becomes long. In particular, the presence of a barrier
means that the three distributions are no longer identical with symmetry about
their means being broken. We also study a closely related statistical quantity,
namely, the distribution of the maximum displacement of a Brownian particle and
show that it deviates significantly from the usual half-Gaussian form
Particle-Environment Interactions In Arbitrary Dimensions: A Unifying Analytic Framework To Model Diffusion With Inert Spatial Heterogeneities
Abridged abstract: Inert interactions between randomly moving entities and
spatial disorder play a crucial role in quantifying the diffusive properties of
a system. These interactions affect only the movement of the entities, and
examples range from molecules advancing along dendritic spines to anti-predator
displacements of animals due to sparse vegetation. Despite the prevalence of
such systems, a general framework to model the movement explicitly in the
presence of spatial heterogeneities is missing. Here, we tackle this challenge
and develop an analytic theory to model inert particle-environment interactions
in domains of arbitrary shape and dimensions. We use a discrete space
formulation which allows us to model the interactions between an agent and the
environment as perturbed dynamics between lattice sites. Interactions from
spatial disorder, such as impenetrable and permeable obstacles or regions of
increased or decreased diffusivity, as well as many others, can be modelled
using our framework. We provide exact expressions for the generating function
of the occupation probability of the diffusing particle and related transport
quantities such as first-passage, return and exit probabilities and their
respective means. We uncover a surprising property, the disorder indifference
phenomenon of the mean first-passage time in the presence of a permeable
barrier in quasi-1D systems. We demonstrate the widespread applicability of our
formalism by considering three examples that span across scales and
disciplines. (1) We explore an enhancement strategy of transdermal drug
delivery. (2) We associate the disorder with a decision-making process of an
animal to study thigmotaxis. (3) We illustrate the use of spatial
heterogeneities to model inert interactions between particles by modelling the
search for a promoter region on the DNA by transcription factors during gene
transcription
Localization transition induced by learning in random searches
We solve an adaptive search model where a random walker or L\'evy flight
stochastically resets to previously visited sites on a -dimensional lattice
containing one trapping site. Due to reinforcement, a phase transition occurs
when the resetting rate crosses a threshold above which non-diffusive
stationary states emerge, localized around the inhomogeneity. The threshold
depends on the trapping strength and on the walker's return probability in the
memoryless case. The transition belongs to the same class as the
self-consistent theory of Anderson localization. These results show that
similarly to many living organisms and unlike the well-studied Markovian walks,
non-Markov movement processes can allow agents to learn about their environment
and promise to bring adaptive solutions in search tasks.Comment: 5 pages, 5 figures + 4 pages of Supplemental Information. Accepted in
Physical Review Letter
Bumblebees can discriminate between scent-marks deposited by conspecifics
Bumblebees secrete a substance from their tarsi wherever they land, which can be detected by conspecifics. These secretions are referred to as scent-marks, which bumblebees are able to use as social cues. Although it has been found that bumblebees can detect and associate scent-marks with rewarding or unrewarding flowers, their ability at discriminating between scent-marks from bumblebees of differing relatedness is unknown. We performed three separate experiments with bumblebees (Bombus terrestris), where they were repeatedly exposed to rewarding and unrewarding artificial flowers simultaneously. Each flower type carried scent-marks from conspecifics of differing relatedness or were unmarked. We found that bumblebees are able to distinguish between 1. Unmarked flowers and flowers that they themselves had scent-marked, 2. Flowers scent-marked by themselves and flowers scent-marked by others in their nest (nestmates), and 3. Flowers scent-marked by their nestmates and flowers scent-marked by non-nestmates. The bumblebees found it more difficult to discriminate between each of the flower types when both flower types were scent-marked. Our findings show that bumblebees have the ability to discriminate between scent-marks of conspecifics, which are potentially very similar in their chemical composition, and they can use this ability to improve their foraging success
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