Next-generation HVAC: Prospects for and limitations of desiccant and membrane-based dehumidification and cooling

Recently, next-generation HVAC technologies have gained attention as potential alternatives to the conventional vapor-compression system (VCS) for dehumidification and cooling. Previous studies have primarily focused on analyzing a specific technology or its application to a particular climate. A comparison of these technologies is necessary to elucidate the reasons and conditions under which one technology might outperform the rest. In this study, we apply a uniform framework based on fundamental thermodynamic principles to assess and compare different HVAC technologies from an energy conversion standpoint. The thermodynamic least work of dehumidification and cooling is formally defined as a thermodynamic benchmark, while VCS performance is chosen as the industry benchmark against which other technologies, namely desiccant-based cooling system (DCS) and membrane-based cooling system (MCS), are compared. The effect of outdoor temperature and humidity on device performance is investigated, and key insights underlying the dehumidification and cooling process are elucidated. In spite of the great potential of DCS and MCS technologies, our results underscore the need for improved system-level design and integration if DCS or MCS are to compete with VCS. Our findings have significant implications for the design and operation of next-generation HVAC technologies and shed light on potential avenues to achieve higher efficiencies in dehumidification and cooling applications

Water-Energy Nexus in Saudi Arabia

Water and energy systems have often been treated as separate "silo" systems over the entire pathway from production to consumption. However, their close interdependence requires some perspective of the water-energy nexus (WEN), especially in regions with very high water stresses combined with a myriad of rapid changes in resource production and consumption. This work provides a comprehensive analysis of the interdependence of water and energy in Saudi Arabia, including collecting data to map out energy and water consumption across the Kingdom. By combining and cross-referencing numerous data sources, this work creates the first country-wide Sankey diagram describing the interdependence of water and energy use in the Kingdom, and provides the most comprehensive mapping of power plant type and size. Additionally, this work reviews the energy and water industries, including outlining trends in population, urbanization, natural gas, oil, electricity, desalination, water use in energy production, and energy use in water production. Overall, a clear pattern has emerged: converging trends of rapid population increases, dwindling water resources, and rapidly growing desalination means that water use must be one of the primary driver of resource planning in Saudi, and plans to shift energy production to reduce GHG emissions must include water needs

Topology and Evolution of Technology Innovation Networks

The web of relations linking technological innovation can be fairly described in terms of patent citations. The resulting patent citation network provides a picture of the large-scale organization of innovations and its time evolution. Here we study the patterns of change of patents registered by the US Patent and Trademark Office (USPTO). We show that the scaling behavior exhibited by this network is consistent with a preferential attachment mechanism together with a Weibull-shaped aging term. Such attachment kernel is shared by scientific citation networks, thus indicating an universal type of mechanism linking ideas and designs and their evolution. The implications for evolutionary theory of innovation are discussed.Comment: 6 pages, 5 figures, submitted to Physical Review

Long-read transcriptome sequencing analysis with IsoTools

Long-read transcriptome sequencing (LRTS) holds the promise to boost our understanding of alternative splicing. Recent advances in accuracy and throughput have diminished the major limitations and enabled the direct quantification of isoforms. Considering the complexity of the data and the broad range of potential applications, it is clear that highly flexible, accurate analysis tools are crucial. Here, we present IsoTools, a comprehensive Python-based analysis package, for the improvement of alternative and differential splicing analysis. Iso-Tools provides a comprehensive data structure that integrates genomic information from LRTS transcripts together with the reference annotation, and enables broad functionality to quality control, visualize and analyze the data. Additionally, we implemented a graph-based method for the identification of alternative splicing events and a statistical approach based on the beta binomial distribution for the detection of differential events. To demonstrate our methods, we generated PacBio Iso-Seq data of human hepatocytes treated with the HDAC inhibitor valproic acid, a compound known to induce widespread transcriptional changes. Contrasted with short read RNA-Seq of the same samples, this analysis shows that LRTS provides valuable additional insights for a better understanding of alternative splicing, in particular with respect to complex novel and differential splicing events. IsoTools is made available for the community along with extensive documentation at https://github.com/MatthiasLienhard/isotools

Global analysis of the TRAPPIST Ultra-Cool Dwarf Transit Survey

ABSTRACT We conducted a global analysis of the TRAPPIST Ultra-Cool Dwarf Transit Survey – a prototype of the SPECULOOS transit search conducted with the TRAPPIST-South robotic telescope in Chile from 2011 to 2017 – to estimate the occurrence rate of close-in planets such as TRAPPIST-1b orbiting ultra-cool dwarfs. For this purpose, the photometric data of 40 nearby ultra-cool dwarfs were reanalysed in a self-consistent and fully automated manner starting from the raw images. The pipeline developed specifically for this task generates differential light curves, removes non-planetary photometric features and stellar variability, and searches for transits. It identifies the transits of TRAPPIST-1b and TRAPPIST-1c without any human intervention. To test the pipeline and the potential output of similar surveys, we injected planetary transits into the light curves on a star-by-star basis and tested whether the pipeline is able to detect them. The achieved photometric precision enables us to identify Earth-sized planets orbiting ultra-cool dwarfs as validated by the injection tests. Our planet-injection simulation further suggests a lower limit of 10 per cent on the occurrence rate of planets similar to TRAPPIST-1b with a radius between 1 and 1.3 R⊕ and the orbital period between 1.4 and 1.8 d.</jats:p

Solving random boundary heat model using the finite difference method under mean square convergence

"This is the peer reviewed version of the following article: Cortés, J. C., Romero, J. V., Roselló, M. D., Sohaly, MA. Solving random boundary heat model using the finite difference method under mean square convergence. Comp and Math Methods. 2019; 1:e1026. https://doi.org/10.1002/cmm4.1026 , which has been published in final form at https://doi.org/10.1002/cmm4.1026. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Self-Archiving."[EN] This contribution is devoted to construct numerical approximations to the solution of the one-dimensional boundary value problem for the heat model with uncertainty in the diffusion coefficient. Approximations are constructed via random numerical schemes. This approach permits discussing the effect of the random diffusion coefficient, which is assumed a random variable. We establish results about the consistency and stability of the random difference scheme using mean square convergence. Finally, an illustrative example is presented.Spanish Ministerio de Economía y Competitividad. Grant Number: MTM2017-89664-PCortés, J.; Romero, J.; Roselló, M.; Sohaly, M. (2019). Solving random boundary heat model using the finite difference method under mean square convergence. Computational and Mathematical Methods. 1(3):1-15. https://doi.org/10.1002/cmm4.1026S11513Han, X., & Kloeden, P. E. (2017). Random Ordinary Differential Equations and Their Numerical Solution. Probability Theory and Stochastic Modelling. doi:10.1007/978-981-10-6265-0Villafuerte, L., Braumann, C. A., Cortés, J.-C., & Jódar, L. (2010). Random differential operational calculus: Theory and applications. Computers & Mathematics with Applications, 59(1), 115-125. doi:10.1016/j.camwa.2009.08.061Logan, J. D. (2004). Partial Differential Equations on Bounded Domains. Undergraduate Texts in Mathematics, 121-171. doi:10.1007/978-1-4419-8879-9_4Cannon, J. R. (1964). A Cauchy problem for the heat equation. Annali di Matematica Pura ed Applicata, 66(1), 155-165. doi:10.1007/bf02412441LinPPY.On The Numerical Solution of The Heat Equation in Unbounded Domains[PhD thesis].New York NY:New York University;1993.Li, J.-R., & Greengard, L. (2007). On the numerical solution of the heat equation I: Fast solvers in free space. Journal of Computational Physics, 226(2), 1891-1901. doi:10.1016/j.jcp.2007.06.021Han, H., & Huang, Z. (2002). Exact and approximating boundary conditions for the parabolic problems on unbounded domains. Computers & Mathematics with Applications, 44(5-6), 655-666. doi:10.1016/s0898-1221(02)00180-3Han, H., & Huang, Z. (2002). A class of artificial boundary conditions for heat equation in unbounded domains. Computers & Mathematics with Applications, 43(6-7), 889-900. doi:10.1016/s0898-1221(01)00329-7Strikwerda, J. C. (2004). Finite Difference Schemes and Partial Differential Equations, Second Edition. doi:10.1137/1.9780898717938Kloeden, P. E., & Platen, E. (1992). Numerical Solution of Stochastic Differential Equations. doi:10.1007/978-3-662-12616-5Øksendal, B. (2003). Stochastic Differential Equations. Universitext. doi:10.1007/978-3-642-14394-6Holden, H., Øksendal, B., Ubøe, J., & Zhang, T. (2010). Stochastic Partial Differential Equations. doi:10.1007/978-0-387-89488-1El-Tawil, M. A., & Sohaly, M. A. (2012). Mean square convergent three points finite difference scheme for random partial differential equations. Journal of the Egyptian Mathematical Society, 20(3), 188-204. doi:10.1016/j.joems.2012.08.017Cortés, J.-C., Navarro-Quiles, A., Romero, J.-V., Roselló, M.-D., & Sohaly, M. A. (2018). Solving the random Cauchy one-dimensional advection–diffusion equation: Numerical analysis and computing. Journal of Computational and Applied Mathematics, 330, 920-936. doi:10.1016/j.cam.2017.02.001Cortés, J. C., Jódar, L., Villafuerte, L., & Villanueva, R. J. (2007). Computing mean square approximations of random diffusion models with source term. Mathematics and Computers in Simulation, 76(1-3), 44-48. doi:10.1016/j.matcom.2007.01.020Cortés, J. C., Jódar, L., & Villafuerte, L. (2009). Random linear-quadratic mathematical models: Computing explicit solutions and applications. Mathematics and Computers in Simulation, 79(7), 2076-2090. doi:10.1016/j.matcom.2008.11.008Henderson, D., & Plaschko, P. (2006). Stochastic Differential Equations in Science and Engineering. doi:10.1142/580

Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences

We report the sequences of 1,244 human Y chromosomes randomly ascertained from 26 worldwide populations by the 1000 Genomes Project. We discovered more than 65,000 variants, including single-nucleotide variants, multiple-nucleotide variants, insertions and deletions, short tandem repeats, and copy number variants. Of these, copy number variants contribute the greatest predicted functional impact. We constructed a calibrated phylogenetic tree on the basis of binary single-nucleotide variants and projected the more complex variants onto it, estimating the number of mutations for each class. Our phylogeny shows bursts of extreme expansion in male numbers that have occurred independently among each of the five continental superpopulations examined, at times of known migrations and technological innovations

Laboratory investigation of lateral dispersion within dense arrays of randomly distributed cylinders at transitional Reynolds number

Published versio

Confronting compositional confusion through the characterisation of the sub-Neptune orbiting HD 77946

We report on the detailed characterization of the HD 77946 planetary system. HD 77946 is an F5 ($M_*$ = 1.17 M$_{\odot}$, $R_*$ = 1.31 R$_{\odot}$) star, which hosts a transiting planet recently discovered by NASA's Transiting Exoplanet Survey Satellite (TESS), classified as TOI-1778 b. Using TESS photometry, high-resolution spectroscopic data from HARPS-N, and photometry from CHEOPS, we measure the radius and mass from the transit and RV observations, and find that the planet, HD 77946 b, orbits with period $P_{\rm b}$ = $6.527282_{-0.000020}^{+0.000015}$ d, has a mass of $M_{\rm b} = 8.38\pm{1.32}$M$_\oplus$, and a radius of $R_{\rm b} = 2.705_{-0.081}^{+0.086}$R$_\oplus$. From the combination of mass and radius measurements, and the stellar chemical composition, the planet properties suggest that HD 77946 b is a sub-Neptune with a $\sim$1\% H/He atmosphere. However, a degeneracy still exists between water-world and silicate/iron-hydrogen models, and even though interior structure modelling of this planet favours a sub-Neptune with a H/He layer that makes up a significant fraction of its radius, a water-world composition cannot be ruled out, as with $T_{\rm eq} = 1248^{+40}_{-38}~$K, water may be in a supercritical state. The characterisation of HD 77946 b, adding to the small sample of well-characterised sub-Neptunes, is an important step forwards on our journey to understanding planetary formation and evolution pathways. Furthermore, HD 77946 b has one of the highest transmission spectroscopic metrics for small planets orbiting hot stars, thus transmission spectroscopy of this key planet could prove vital for constraining the compositional confusion that currently surrounds small exoplanets

Phospho.ELM: a database of phosphorylation sites—update 2011

The Phospho.ELM resource (http://phospho.elm.eu.org) is a relational database designed to store in vivo and in vitro phosphorylation data extracted from the scientific literature and phosphoproteomic analyses. The resource has been actively developed for more than 7 years and currently comprises 42 574 serine, threonine and tyrosine non-redundant phosphorylation sites. Several new features have been implemented, such as structural disorder/order and accessibility information and a conservation score. Additionally, the conservation of the phosphosites can now be visualized directly on the multiple sequence alignment used for the score calculation. Finally, special emphasis has been put on linking to external resources such as interaction networks and other databases