Astrophysics in S.Co.P.E

S.Co.P.E. is one of the four projects funded by the Italian Government in order to provide Southern Italy with a distributed computing infrastructure for fundamental science. Beside being aimed at building the infrastructure, S.Co.P.E. is also actively pursuing research in several areas among which astrophysics and observational cosmology. We shortly summarize the most significant results obtained in the first two years of the project and related to the development of middleware and Data Mining tools for the Virtual Observatory

Morfologia de machos e fêmeas de Euglossa annectans Dresler 1982 (Hymenoptera, Apidae, Euglossini).

Foram coletados dados de morfometria de machos e fêmeas de Euglossa annectans em condições de laboratório, de um grupo de células separado artificialmente, a partir de um ninho alojado espontaneamente em caixa racional de abelhas sem ferrão

DAME: A Distributed Web based Framework for Knowledge Discovery in Databases

Massive data sets explored in many e-science communities, as in the Astrophysics case, are gathered by a very large number of techniques and stored in very diversified and often-incompatible data repositories. Moreover, we need to integrate services across distributed, heterogeneous, dynamic virtual organizations formed from the different resources within a single enterprise and/or from external resource sharing and service provider relationships. The DAME project aims at creating a distributed e-infrastructure to guarantee integrated and asynchronous access to data collected by very different experiments and scientific communities in order to correlate them and improve their scientific usability. The project consists of a data mining framework with powerful software instruments capable to work on massive data sets, organized by following Virtual Observatory standards, in a distributed computing environment. The integration process can be technically challenging because of the need to achieve a specific quality of service when running on top of different native platforms. In these terms, the result of the DAME project effort is a service-oriented architecture, by using appropriate standards and incorporating Cloud/Grid paradigms andWeb services, that will have as main target the integration of interdisciplinary distributed systems within and across organizational domains

GRID-Launcher v.1.0

GRID-launcher-1.0 was built within the VO-Tech framework, as a software interface between the UK-ASTROGRID and a generic GRID infrastructures in order to allow any ASTROGRID user to launch on the GRID computing intensive tasks from the ASTROGRID Workbench or Desktop. Even though of general application, so far the Grid-Launcher has been tested on a few selected softwares (VONeural-MLP, VONeural-SVM, Sextractor and SWARP) and on the SCOPE-GRID

Micro RNA facilitated chemoresistance in gastric cancer: a novel biomarkers and potential therapeutics

Introduction: In spite of the substantial advances in clinical practice, Gastric cancer (GC) remains the third leading cause of cancer death worldwide. The incidence of drug resistance remains a hindrance to effective treatment for GC. Although the molecular mechanisms of chemoresistance have broadly studied, the gene regulation and expression mechanisms of miRNA have not entirely understood. Methods: Online databases of PubMed, Scopus, Google Scholar, and Embase databases were searched to retrieve relevant publications. The following keywords were used: MicroRNA, Noncoding RNA, miRNA, Gastric cancer, drug resistance, and chemoresistance. Results: miRNAs play a pivotal role in the initiation, progression of tumor and metastasis, as well as in the development of pathways mediating resistance to chemotherapy in GC. Unluckily, to date, there is no consistent, reliable biomarker available to predict the response of chemotherapy before the start of the treatment. Discussion: In this review, we would like to provide an overview of the miRNAs and miRNA facilitated chemoresistance machinery in GC to develop a personalized treatment to overcome GC drug resistance

The Lepidopteran endoribonuclease-U domain protein P102 displays dramatically reduced enzymatic activity and forms functional amyloids

Hemocytes of Heliothis virescens (F.) (Lepidoptera, Noctuidae) larvae produce a protein, P102, with a putative endoribonuclease-U domain. In previous works we have shown that P102 is involved in Lepidopteran immune response by forming amyloid fibrils, which catalyze and localize melanin deposition around non-self intruders during encapsulation, preventing harmful systemic spreading. Here we demonstrate that P102 belongs to a new class of proteins that, at least in Lepidoptera, has a diminished endoribonuclease-U activity probably due to the lack of two out of five catalytically essential residues. We show that the P102 homolog from Trichoplusia ni (Lepidoptera, Noctuidae) displays catalytic site residues identical to P102, a residual endoribonuclease-U activity and the ability to form functional amyloids. On the basis of these results as well as sequence and structural analyses, we hypothesize that all the Lepidoptera endoribonuclease-U orthologs with catalytic site residues identical to P102 form a subfamily with similar function