Formation and evolution of galaxy dark matter halos and their substructure

We use the ``Via Lactea'' simulation to study the co-evolution of a Milky Way-size LambdaCDM halo and its subhalo population. While most of the host halo mass is accreted over the first 6 Gyr in a series of major mergers, the physical mass distribution [not M_vir(z)] remains practically constant since z=1. The same is true in a large sample of LambdaCDM galaxy halos. Subhalo mass loss peaks between the turnaround and virialization epochs of a given mass shell, and declines afterwards. 97% of the z=1 subhalos have a surviving bound remnant at the present epoch. The retained mass fraction is larger for initially lighter subhalos: satellites with maximum circular velocities Vmax=10 km/s at z=1 have today about 40% of their mass back then. At the first pericenter passage a larger average mass fraction is lost than during each following orbit. Tides remove mass in substructure from the outside in, leading to higher concentrations compared to field halos of the same mass. This effect, combined with the earlier formation epoch of the inner satellites, results in strongly increasing subhalo concentrations towards the Galactic center. We present individual evolutionary tracks and present-day properties of the likely hosts of the dwarf satellites around the Milky Way. The formation histories of ``field halos'' that lie today beyond the Via Lactea host are found to strongly depend on the density of their environment. This is caused by tidal mass loss that affects many field halos on eccentric orbits.Comment: 20 pages, 18 figures. Figures 6,7 and 8 corrected in this version, for details see the erratum in ApJ 679, 1680 and http://www.ucolick.org/~diemand/vl/publ/vlevolerr.pdf. Data, movies and images are available at http://www.ucolick.org/~diemand/vl

The shapes, orientation, and alignment of Galactic dark matter subhalos

We present a study of the shapes, orientations, and alignments of Galactic dark matter subhalos in the ``Via Lactea'' simulation of a Milky Way-size LCDM host halo. Whereas isolated dark matter halos tend to be prolate, subhalos are predominantly triaxial. Overall subhalos are more spherical than the host halo, with minor to major and intermediate to major axis ratios of 0.68 and 0.83, respectively. Like isolated halos, subhalos tend to be less spherical in their central regions. The principal axis ratios are independent of subhalo mass, when the shapes are measured within a physical scale like r_Vmax, the radius of the peak of the circular velocity curve. Subhalos tend to be slightly more spherical closer to the host halo center. The spatial distribution of the subhalos traces the prolate shape of the host halo when they are selected by the largest V_max they ever had, i.e. before they experienced strong tidal mass loss. The subhalos' orientation is not random: the major axis tends to align with the direction towards the host halo center. This alignment disappears for halos beyond 3 r_200 and is more pronounced when the shapes are measured in the outer regions of the subhalos. The radial alignment is preserved during a subhalo's orbit and they become elongated during pericenter passage, indicating that the alignment is likely caused by the host halo's tidal forces. These tidal interactions with the host halo act to make subhalos rounder over time.Comment: 12 pages, 11 figures, submitted to ApJ, v2: corrected typo in abstract ("[...] subhalos tend be less spherical in their central regions."), added a few reference

Impact of fluctuations in gaseous H2S concentrations on sulfide uptake by sewer concrete: The effect of high H2S loads

The acid production from the oxidation of hydrogen sulfide (H2S) in sewer air results in serious corrosion of exposed concrete surfaces in sewers. Large fluctuations of gaseous H2S concentrations occur in sewers due to the diurnal profiles of sewage flow and retention times and the necessity of intermittent pumping of sewage from pressure pipes into gravity pipes. How the high concentrations of H2S due to these events may affect H2S uptake and subsequent corrosion by concrete sewers is largely unknown. This study determined the effect of short- and long-term increases in H2S levels on the sulfide uptake rate (SUR) of concrete surfaces with an active corrosion layer. The results showed that during the high load situation the SUR increased significantly but then decreased (compared to the baseline SUR) by about 7-14% and 41-50% immediately after short- and long-term H2S high-load periods, respectively. For both exposure conditions, the SUR gradually (over several hours) recovered to approximately 90% of the baseline SUR. Further tests suggest multiple factors may contribute to the observed decrease of SUR directly after the high H2S load. This includes the temporary storage of elemental sulfur in the corrosion layer and inhibition of sulfide oxidizing bacteria (SOB) due to high H2S level and temporary acid surge. Additionally, the delay of the corrosion layer to fully recover the SUR after the high H2S load suggests that there is a longer-term inhibitive effect of the high H2S levels on the activity of the SOB in the corrosion layer. Due to the observed activity reductions, concrete exposed to occasional short-term high H2S load periods had an overall lower H2S uptake compared to concrete exposed to constant H2S levels at the same average concentration. To accurately predict H2S uptake by sewer concrete and hence the likely maximum corrosion rates, a correction factor should be adopted for the H2S fluctuations when average H2S levels are used in the prediction. (C) 2015 Elsevier Ltd. All rights reserved

Identification of controlling factors for the initiation of corrosion of fresh concrete sewers

The development of concrete corrosion in new sewer pipes undergoes an initiation process before reaching an active corrosion stage. This initiation period is assumed to last several months to years but the key factors affecting the process, and its duration, are not well understood. This study is therefore focused on this initial stage of the corrosion process and the effect of key environmental factors. Such knowledge is important for the effective management of corrosion in new sewers, as every year of life extension of such systems has a very high financial benefit. This long-term (4.5 year) study has been conducted in purpose-built corrosion chambers that closely simulated the sewer environment, but with control of three key environmental factors being hydrogen sulfide (H2S) gas phase concentration, relative humidity and air temperature. Fresh concrete coupons, cut from an industry-standard sewer pipe, were exposed to the corrosive conditions in the chambers, both in the gas phase and partially submerged in wastewater. A total of 36 exposure conditions were investigated to determine the controlling factors by regular retrieval of concrete coupons for detailed analysis of surface pH, sulfur compounds (elemental sulfur and sulfate) and concrete mass loss. Corrosion initiation times were thus determined for different exposure conditions. It was found that the corrosion initiation time of both gas-phase and partially-submerged coupons was positively correlated with the gas phase H2S concentration, but only at levels of 10 ppm or below, indicating that sulfide oxidation rate rather than the H2S concentration was the limiting factor during the initiation stage. Relative humidity also played a role for the corrosion initiation of the gas-phase coupons. However, the partially-submerged coupons were not affected by humidity as these coupons were in direct contact with the sewage and hence did have sufficient moisture to enable the microbial processes to proceed. The corrosion initiation time was also shortened by higher gas temperature due to its positive impact on reaction kinetics. These findings provide real opportunities for pro-active sewer asset management with the aim to delay the on-set of the corrosion processes, and hence extend the service life of sewers, through improved prediction and optimization capacity. (C) 2015 Elsevier Ltd. All rights reserved

Baff Mediates Survival of Peripheral Immature B Lymphocytes

B cell maturation is a very selective process that requires finely tuned differentiation and survival signals. B cell activation factor from the TNF family (BAFF) is a TNF family member that binds to B cells and potentiates B cell receptor (BCR)-mediated proliferation. A role for BAFF in B cell survival was suggested by the observation of reduced peripheral B cell numbers in mice treated with reagents blocking BAFF, and high Bcl-2 levels detected in B cells from BAFF transgenic (Tg) mice. We tested in vitro the survival effect of BAFF on lymphocytes derived from primary and secondary lymphoid organs. BAFF induced survival of a subset of splenic immature B cells, referred to as transitional type 2 (T2) B cells. BAFF treatment allowed T2 B cells to survive and differentiate into mature B cells in response to signals through the BCR. The T2 and the marginal zone (MZ) B cell compartments were particularly enlarged in BAFF Tg mice. Immature transitional B cells are targets for negative selection, a feature thought to promote self-tolerance. These findings support a model in which excessive BAFF-mediated survival of peripheral immature B cells contributes to the emergence and maturation of autoreactive B cells, skewed towards the MZ compartment. This work provides new clues on mechanisms regulating B cell maturation and tolerance

Malarial Hemozoin Is a Nalp3 Inflammasome Activating Danger Signal

BACKGROUND: Characteristic symptoms of malaria include recurrent fever attacks and neurodegeneration, signs that are also found in patients with a hyperactive Nalp3 inflammasome. Plasmodium species produce a crystal called hemozoin that is generated by detoxification of heme after hemoglobin degradation in infected red blood cells. Thus, we hypothesized that hemozoin could activate the Nalp3 inflammasome, due to its particulate nature reminiscent of other inflammasome-activating agents. METHODOLOGY/PRINCIPAL FINDINGS: We found that hemozoin acts as a proinflammatory danger signal that activates the Nalp3 inflammasome, causing the release of IL-1beta. Similar to other Nalp3-activating particles, hemozoin activity is blocked by inhibiting phagocytosis, K(+) efflux and NADPH oxidase. In vivo, intraperitoneal injection of hemozoin results in acute peritonitis, which is impaired in Nalp3-, caspase-1- and IL-1R-deficient mice. Likewise, the pathogenesis of cerebral malaria is dampened in Nalp3-deficient mice infected with Plasmodium berghei sporozoites, while parasitemia remains unchanged. SIGNIFICANCE/CONCLUSIONS: The potent pro-inflammatory effect of hemozoin through inflammasome activation may possibly be implicated in plasmodium-associated pathologies such as cerebral malaria

Malarial Hemozoin Is a Nalp3 Inflammasome Activating Danger Signal

BACKGROUND: Characteristic symptoms of malaria include recurrent fever attacks and neurodegeneration, signs that are also found in patients with a hyperactive Nalp3 inflammasome. Plasmodium species produce a crystal called hemozoin that is generated by detoxification of heme after hemoglobin degradation in infected red blood cells. Thus, we hypothesized that hemozoin could activate the Nalp3 inflammasome, due to its particulate nature reminiscent of other inflammasome-activating agents. METHODOLOGY/PRINCIPAL FINDINGS: We found that hemozoin acts as a proinflammatory danger signal that activates the Nalp3 inflammasome, causing the release of IL-1beta. Similar to other Nalp3-activating particles, hemozoin activity is blocked by inhibiting phagocytosis, K(+) efflux and NADPH oxidase. In vivo, intraperitoneal injection of hemozoin results in acute peritonitis, which is impaired in Nalp3-, caspase-1- and IL-1R-deficient mice. Likewise, the pathogenesis of cerebral malaria is dampened in Nalp3-deficient mice infected with Plasmodium berghei sporozoites, while parasitemia remains unchanged. SIGNIFICANCE/CONCLUSIONS: The potent pro-inflammatory effect of hemozoin through inflammasome activation may possibly be implicated in plasmodium-associated pathologies such as cerebral malaria

Biomass production of herbaceous energy crops in the United States: field trial results and yield potential maps from the multiyear regional feedstock partnership

Current knowledge of yield potential and best agronomic management practices for perennial bioenergy grasses is primarily derived from small-scale and short-term studies, yet these studies inform policy at the national scale. In an effort to learn more about how bioenergy grasses perform across multiple locations and years, the U.S. Department of Energy (US DOE)/Sun Grant Initiative Regional Feedstock Partnership was initiated in 2008. The objectives of the Feedstock Partnership were to (1) provide a wide range of information for feedstock selection (species choice) and management practice options for a variety of regions and (2) develop national maps of potential feedstock yield for each of the herbaceous species evaluated. The Feedstock Partnership expands our previous understanding of the bioenergy potential of switchgrass, Miscanthus, sorghum, energycane, and prairie mixtures on Conservation Reserve Program land by conducting long-term, replicated trials of each species at diverse environments in the U.S. Trials were initiated between 2008 and 2010 and completed between 2012 and 2015 depending on species. Field-scale plots were utilized for switchgrass and Conservation Reserve Program trials to use traditional agricultural machinery. This is important as we know that the smaller scale studies often overestimated yield potential of some of these species. Insufficient vegetative propagules of energycane and Miscanthus prohibited farm-scale trials of these species. The Feedstock Partnership studies also confirmed that environmental differences across years and across sites had a large impact on biomass production. Nitrogen application had variable effects across feedstocks, but some nitrogen fertilizer generally had a positive effect. National yield potential maps were developed using PRISM-ELM for each species in the Feedstock Partnership. This manuscript, with the accompanying supplemental data, will be useful in making decisions about feedstock selection as well as agronomic practices across a wide region of the country