Researcher Name Resolver: A framework for researcher identification in Japan

Institutional repositories with the aim of open access are gradually spreading in academia, and more and more research articles and academic books are being archived on the web. In particular, researchers are accessing more and more electronic articles, papers, and books on the web. This paper describes an information service that firstly provides researcher name authority on the web, and secondly gathers the web locations of academic information resources and organizes them for individual researchers (especially researchers working in Japan)

Researcher Name Resolver: A framework for researcher identification in Japan

Institutional repositories with the aim of open access are gradually spreading in academia, and more and more research articles and academic books are being archived on the web. In particular, researchers are accessing more and more electronic articles, papers, and books on the web. This paper describes an information service that firstly provides researcher name authority on the web, and secondly gathers the web locations of academic information resources and organizes them for individual researchers (especially researchers working in Japan)

Multiple feedback loops through cytokinin signaling control stem cell number within the Arabidopsis shoot meristem

A central unanswered question in stem cell biology, both in plants and in animals, is how the spatial organization of stem cell niches are maintained as cells move through them. We address this question for the shoot apical meristem (SAM) which harbors pluripotent stem cells responsible for growth of above-ground tissues in flowering plants. We find that localized perception of the plant hormone cytokinin establishes a spatial domain in which cell fate is respecified through induction of the master regulator WUSCHEL as cells are displaced during growth. Cytokinin-induced WUSCHEL expression occurs through both CLAVATA-dependent and CLAVATA-independent pathways. Computational analysis shows that feedback between cytokinin response and genetic regulators predicts their relative patterning, which we confirm experimentally. Our results also may explain how increasing cytokinin concentration leads to the first steps in reestablishing the shoot stem cell niche in vitro

Interstitial lung disease caused by TS-1: a case of long-term drug retention as a fatal adverse reaction

TS-1 is an oral anti-cancer agent for gastric cancer with a high response rate and low toxicity. We report a case of long-term drug retention of TS-1 causing interstitial lung disease (ILD) as a fatal adverse reaction. A 65-year-old woman underwent a total gastrectomy with pathologic confirmation of gastric adenocarcinoma. She received 6 cycles of TS-1 and low-dose cisplatin for post-operative adjuvant chemotherapy followed by single-agent maintenance therapy with TS-1. After 8 months, the patient complained of a productive cough with sputum and mild dyspnea. A pulmonary evaluation revealed diffuse ILD in the lung fields, bilaterally. In spite of discontinuing chemotherapy and the administration of corticosteroids, the pulmonary symptoms did not improve, and the patient died of pulmonary failure. TS-1-induced ILD can be caused by long-term drug retention that alters the lung parenchyma irreversibly, the outcome of which can be life-threatening. Pulmonary evaluation for early detection of disease is recommended

Researcher Name Resolver: identifier management system for Japanese researchers

We built a researcher identifier management system called the Researcher Name Resolver (RNR) to assist with the name disambiguation of authors in digital libraries on the Web. RNR, which is designed to cover all researchers in Japan, is a Web-oriented service that can be openly connected with external scholastic systems. We expect it to be widely used for enriched scholarly communications. In this paper, we first outline the conceptual framework of RNR, which is jointly focused on researcher identifier management and Web resource linking. We based our researcher identifier scheme on the reuse of multiple sets of existing researcher identifiers belonging to the Japanese grant database KAKEN and the researcher directory ReaD & Researchmap. Researcher identifiers are associated by direct links to related resources on the Web through a combination of methods, including descriptive mapping, focused crawling on campus directories and researcher identification by matching names and affiliations. Second, we discuss our implementation of RNR based on this framework. Researcher identifiers construct uniform resource identifiers to show Web pages that describe researcher profiles and provide links to related external resources. We have adapted Web-friendly technologies—e.g., OpenSearch and the RDFs of Linked Data technology—in this implementation to provide Web-friendly services. Third, we discuss our application of RNR to a name disambiguation task for the search portal of the Japanese Institutional Repositories Online to determine how well the researcher identifier management system cooperates with external systems. Finally, we discuss lessons learned from the entire project as well as the future development directions we intend to take

Slc3a2 Mediates Branched-Chain Amino-Acid-Dependent Maintenance of Regulatory T Cells

Foxp3+ regulatory T (Treg) cells, which suppress immune responses, are highly proliferative in vivo. However, it remains unclear how the active replication of Treg cells is maintained in vivo. Here, we show that branched-chain amino acids (BCAAs), including isoleucine, are required for maintenance of the proliferative state of Treg cells via the amino acid transporter Slc3a2-dependent metabolic reprogramming. Mice fed BCAA-reduced diets showed decreased numbers of Foxp3+ Treg cells with defective in vivo proliferative capacity. Mice lacking Slc3a2 specifically in Foxp3+ Treg cells showed impaired in vivo replication and decreased numbers of Treg cells. Slc3a2-deficient Treg cells showed impaired isoleucine-induced activation of the mTORC1 pathway and an altered metabolic state. Slc3a2 mutant mice did not show an isoleucine-induced increase of Treg cells in vivo and exhibited multi-organ inflammation. Taken together, these findings demonstrate that BCAA controls Treg cell maintenance via Slc3a2-dependent metabolic regulation

Regulation of diacylglycerol production and protein kinase C stimulation during sperm- and PLCζ-mediated mouse egg activation

Background information. At fertilization in mammalian eggs, the sperm induces a series of Ca2+ oscillations via the production of inositol 1,4,5-trisphosphate. Increased inositol 1,4,5-trisphosphate production appears to be triggered by a sperm-derived PLCζ (phospholipase C-ζ) that enters the egg after gamete fusion. The specific phosphatidylinositol 4,5-bisphosphate hydrolytic activity of PLCζ implies that DAG (diacylglycerol) production, and hence PKC (protein kinase C) stimulation, also occurs during mammalian egg fertilization. Fertilization-mediated increase in PKC activity has been demonstrated; however, its precise role is unclear

Divergent effect of mammalian PLCζ in generating Ca2+ oscillations in somatic cells compared with eggs

Sperm PLCζ (phospholipase Cζ) is a distinct phosphoinositide-specific PLC isoform that is proposed to be the physiological trigger of egg activation and embryo development at mammalian fertilization. Recombinant PLCζ has the ability to trigger Ca2+ oscillations when expressed in eggs, but it is not known how PLCζ activity is regulated in sperm or eggs. In the present study, we have transfected CHO (Chinese-hamster ovary) cells with PLCζ fused with either YFP (yellow fluorescent protein) or luciferase and found that PLCζ-transfected cells did not display cytoplasmic Ca2+ oscillations any differently from control cells. PLCζ expression was not associated with changes in CHO cell resting Ca2+ levels, nor with a significantly changed Ca2+ response to extracellular ATP compared with control cells transfected with either YFP alone, a catalytically inactive PLCζ or luciferase alone. Sperm extracts containing PLCζ also failed to cause Ca2+ oscillations in CHO cells. Despite these findings, PLCζ-transfected CHO cell extracts exhibited high recombinant protein expression and PLC activity. Furthermore, either PLCζ-transfected CHO cells or derived cell extracts could specifically cause cytoplasmic Ca2+ oscillations when microinjected into mouse eggs. These data suggest that PLCζ-mediated Ca2+ oscillations may require specific factors that are only present within the egg cytoplasm or be inhibited by factors present only in somatic cell lines