231 research outputs found

    Molecular architecture of Gαo and the structural basis for RGS16-mediated deactivation

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    Heterotrimeric G proteins relay extracellular cues from heptahelical transmembrane receptors to downstream effector molecules. Composed of an α subunit with intrinsic GTPase activity and a βγ heterodimer, the trimeric complex dissociates upon receptor-mediated nucleotide exchange on the α subunit, enabling each component to engage downstream effector targets for either activation or inhibition as dictated in a particular pathway. To mitigate excessive effector engagement and concomitant signal transmission, the Gα subunit's intrinsic activation timer (the rate of GTP hydrolysis) is regulated spatially and temporally by a class of GTPase accelerating proteins (GAPs) known as the regulator of G protein signaling (RGS) family. The array of G protein-coupled receptors, Gα subunits, RGS proteins and downstream effectors in mammalian systems is vast. Understanding the molecular determinants of specificity is critical for a comprehensive mapping of the G protein system. Here, we present the 2.9 Å crystal structure of the enigmatic, neuronal G protein Gαo in the GTP hydrolytic transition state, complexed with RGS16. Comparison with the 1.89 Å structure of apo-RGS16, also presented here, reveals plasticity upon Gαo binding, the determinants for GAP activity, and the structurally unique features of Gαo that likely distinguish it physiologically from other members of the larger Gαi family, affording insight to receptor, GAP and effector specificity

    A practical protocol to emulate a reactor scenario on present machines, with application to the ASDEX Upgrade tokamak via predictive modeling

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    In this work, a novel practical strategy to emulate a reactor scenario on present tokamak experiments is presented. A recipe how to scale several relevant parameters from a hypothetical reactor scenario down to present devices is discussed. Equivalence between the energy flux channels is detailed, and the practical actuation scheme is presented. The application of the proposed protocol on the ASDEX Upgrade tokamak is shown foremost using the virtual flight simulator Fenix, with practical experiments planned for future campaigns

    The modeling of a tokamak plasma discharge, from first principles to a flight simulator

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    A newly developed tool to simulate a tokamak full discharge is presented. The tokamak \u27flight simulator\u27 Fenix couples the tokamak control system with a fast and reduced plasma model, which is realistic enough to take into account several of the plasma non-linearities. A distinguishing feature of this modeling tool is that it only requires the pulse schedule (PS) as input to the simulator. The output is a virtual realization of the full discharge, whose time traces can then be used to judge if the PS satisfies control/physics goals or needs to be revised. This tool is envisioned for routine use in the control room before each pulse is performed, but can also be used off-line to correct PS in advance, or to develop and validate reduced models, control schemes for future machines like a commercial reactor, simulating realistic actuators and sensors behavior

    Targeting a Versatile Actuator for EU-DEMO: Real Time Monitoring of Pellet Delivery to Facilitate Burn Control

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    Core particle fueling, an essential task in the European demonstration fusion power plant EU-DEMO, relies on adequate pellet injection. However, pellets are fragile objects, and their delivery efficiency can hardly be assumed to be unity. Exploring kinetic control of the EU-DEMO1 scenario indicates that such missed-out pellets do cause a considerable problem for keeping a burning plasma. Missed-out pellets can cause a severe drop of plasma density that in turn results in a potential drastic loss of burn power. Efforts are under way at the ASDEX Upgrade (AUG) tokamak aiming to provide real-time monitoring of pellet arrival and announcement of missed-out cases to the control systems. To further optimize the controllers, system identification experiments have been performed to identify the dynamic response of the system to the actuator
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