308 research outputs found
Finite Temperature Behavior of Small Silicon and Tin Clusters: An Ab Initio Molecular Dynamics Study
The finite temperature behavior of small Silicon (Si, Si, and
Si) and Tin (Sn and Sn) clusters is studied using
isokinetic Born-Oppenheimer molecular dynamics. The lowest equilibrium
structures of all the clusters are built upon a highly stable tricapped
trigonal prism unit which is seen to play a crucial role in the finite
temperature behavior of these clusters. Thermodynamics of small tin clusters
(Sn and Sn) is revisited in light of the recent experiments on
tin clusters of sizes 18-21 [G. A. Breaux et. al. Phys. Rev. B {\bf 71} 073410
(2005)]. We have calculated heat capacities using multiple histogram technique
for Si, Sn and Si clusters. Our calculated specific heat
curves have a main peak around 2300 K and 2200 K for Si and Sn
clusters respectively. However, various other melting indicators such as root
mean square bond length fluctuations, mean square displacements show that
diffusive motion of atoms within the cluster begins around 650 K. The finite
temperature behavior of Si and Sn is dominated by isomerization
and it is rather difficult to discern the temperature range for transition
region. On the other hand, Si does show a liquid like behavior over a
short temperature range followed by the fragmentation observed around 1800 K.
Finite temperature behavior of Si and Sn show that these clusters
do not melt but fragment around 1200 K and 650 K respectively.Comment: 9 figure
Aeroacoustic and aerodynamic applications of the theory of nonequilibrium thermodynamics
Recent developments in the field of nonequilibrium thermodynamics associated with viscous flows are examined and related to developments to the understanding of specific phenomena in aerodynamics and aeroacoustics. A key element of the nonequilibrium theory is the principle of minimum entropy production rate for steady dissipative processes near equilibrium, and variational calculus is used to apply this principle to several examples of viscous flow. A review of nonequilibrium thermodynamics and its role in fluid motion are presented. Several formulations are presented of the local entropy production rate and the local energy dissipation rate, two quantities that are of central importance to the theory. These expressions and the principle of minimum entropy production rate for steady viscous flows are used to identify parallel-wall channel flow and irrotational flow as having minimally dissipative velocity distributions. Features of irrotational, steady, viscous flow near an airfoil, such as the effect of trailing-edge radius on circulation, are also found to be compatible with the minimum principle. Finally, the minimum principle is used to interpret the stability of infinitesimal and finite amplitude disturbances in an initially laminar, parallel shear flow, with results that are consistent with experiment and linearized hydrodynamic stability theory. These results suggest that a thermodynamic approach may be useful in unifying the understanding of many diverse phenomena in aerodynamics and aeroacoustics
Rotational analysis of the 0-0 band of the A <SUP>3</SUP>Π<SUB>inv</SUB>-X<SUP>3</SUP>Π<SUP>-</SUP> system of ND
The 0-0 band of the A 3Πinv-X 3∑- system of ND was excited in an electrodeless microwave oscillator (2450 Mc./s.) discharge and photographed on a 6·6 meter concave grating spectrograph in the second order at a dispersion of 0·56 A/mm. Twenty-five out of the predicted twenty-seven branches have been identified in the rotational structure of the 0-0 band. From a rotational analysis, the following rotational constants have been determined: (i)X 3 ∑ - state- B0∏(cm.−1) D0∏(cm.−1) (2λ + ϒ) (cm.−1) 8.7757 4.68 × 10-4 −1.8356. (ii)A 3 ∏ inv state - B0∏(cm.−1) D0'(cm.-1) A(cm.-1) C0'(cm.-1) D2'(cm.−1) V00'(cm.−1) 8.7688 5.02 × 10-4 -31.89 -1.40 +0.0118 29799.
Size--sensitive melting characteristics of gallium clusters: Comparison of Experiment and Theory for Ga and Ga
Experiments and simulations have been performed to examine the
finite-temperature behavior of Ga and Ga clusters.
Specific heats and average collision cross sections have been measured as a
function of temperature, and the results compared to simulations performed
using first principles Density--Functional Molecular--Dynamics. The
experimental results show that while Ga apparently undergoes a
solid--liquid transition without a significant peak in the specific--heat,
Ga melts with a relatively sharp peak. Our analysis of the
computational results indicate a strong correlation between the ground--state
geometry and the finite--temperature behavior of the cluster. If the
ground--state geometry is symmetric and "ordered" the cluster is found to have
a distinct peak in the specific--heat. However, if the ground--state geometry
is amorphous or "disordered" the cluster melts without a peak in the
specific--heat.Comment: 6 figure
Somatically Hypermutated Plasmodium-Specific IgM+ Memory B Cells Are Rapid, Plastic, Early Responders upon Malaria Rechallenge
SummaryHumoral immunity consists of pre-existing antibodies expressed by long-lived plasma cells and rapidly reactive memory B cells (MBC). Recent studies of MBC development and function after protein immunization have uncovered significant MBC heterogeneity. To clarify functional roles for distinct MBC subsets during malaria infection, we generated tetramers that identify Plasmodium-specific MBCs in both humans and mice. Long-lived murine Plasmodium-specific MBCs consisted of three populations: somatically hypermutated immunoglobulin M+ (IgM+) and IgG+ MBC subsets and an unmutated IgD+ MBC population. Rechallenge experiments revealed that high affinity, somatically hypermutated Plasmodium-specific IgM+ MBCs proliferated and gave rise to antibody-secreting cells that dominated the early secondary response to parasite rechallenge. IgM+ MBCs also gave rise to T cell-dependent IgM+ and IgG+B220+CD138+ plasmablasts or T cell-independent B220−CD138+ IgM+ plasma cells. Thus, even in competition with IgG+ MBCs, IgM+ MBCs are rapid, plastic, early responders to a secondary Plasmodium rechallenge and should be targeted by vaccine strategies
Emission spectrum of PrO
The bands of PrO at 8488.95 A and 7986.44 A of system I and at 7662.85 A of system III have been photographed on 6.6 meter concave grating spectrograph at a dispersion of 1.2 A/mm and their rotational structure analysed. They are assigned transitions from v'=0 and 1 levels of A2 Δ5/2 and v'=0 level of B2 Δ5/2 to a common v"=0 level of the ground, X2 Π3/2 state
DFT-based Conformational Analysis of a Phospholipid Molecule (DMPC)
The conformational space of the dimyristoyl phosphatidylcholine (DMPC)
molecule has been studied using Density Functional Theory (DFT), augmented with
a damped empirical dispersion energy term (DFT-D). Fourteen ground-state
isomers have been found with total energies within less than 1 kcal/mol.
Despite differences in combinations of their torsion angles, all these
conformers share a common geometric profile, which includes a balance of
attractive, repulsive and constraint forces between and within specific groups
of atoms. The definition of this profile fits with most of the structural
characteristics deduced from measured NMR properties of DMPC solutions. The
calculated vibrational spectrum of the molecule is in good agreement with
experimental data obtained for DMPC bilayers. These results support the idea
that DMPC molecules preserve their individual molecular structures in the
various assemblies.Comment: 31 pages, 6 Tables, 4 Figure
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