Response to sunitinib (Sutent) in chemotherapy refractory clear cell ovarian cancer

• Case describes a response to sunitinib in clear cell ovarian cancer. • Discussion of unique molecular characteristics of clear cell ovarian cancers; • Practical points regarding dosing and toxicity when using sunitinib discussed

Fluorogenic and bioorthogonal modification of rna using photoclick chemistry

A bromoaryltetrazole-modified uridine was synthesized as a new RNA building block for bioorthogonal, light-activated and postsynthetic modification with commercially available fluorescent dyes. It allows “photoclick”-type modifications by irradiation with light (300 nm LED) at internal and terminal positions of presynthesized RNA with maleimide-conjugated fluorophores in good yields. The reaction was evidenced for three different dyes. During irradiation, the emission increases due to the formation of an intrinsically fluorescent pyrazoline moiety as photoclick product. The fluorogenecity of the photoclick reaction was significantly enhanced by energy transfer between the pyrazoline as the reaction product (poor emitter) and the photoclicked dye as the strong emitter. The RNA-dye conjugates show remarkable fluorescent properties, in particular an up to 9.4 fold increase of fluorescence, which are important for chemical biology and fluorescent imaging of RNA in cells

Studies on new antifreeze protein from the psychrophilic diatom, Fragilariopsis cylindrus

Antifreeze proteins (AFPs) are found in a wide range of species including fishes, plants, etc. They have very characteristic feature that inhibit the growth and recrystallization of ice that forms in intercellular spaces. Two expressed sequence tags (ESTs) were previously identified from salt stress cDNA library in Fragilariopsis cylindrus to have similarities with snow mold AFP. Using bioinformatics tools, we analysed these two AFP-ESTs. Accordingly, by using specially designed primers, the open reading frames (ORFs) subcloned into bacterial and plant expression vectors. The predicted gene product, AfpA, had a molecular mass of 27 kDa. Expression of afpA in Escherichia coli yielded an intracellular 27-kDa protein modified with His-tag. According to bioinformatics data, a comparison between AFP-A and carrot AFP has been carried out.Key words: Antifreeze protein, Fragilariopsis cylindrus, recrystallization inhibition

Development of a Sustainable Community‐Based Dental Education Program

Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/153534/1/jddj002203372011758tb05148x.pd

The clinical significance of transfer RNAs present in extracellular vesicles

Extracellular vesicles (EVs) are important for intercellular signalling in multi-cellular organ-isms. However, the role of mature transfer RNAs (tRNAs) and tRNA fragments in EVs has yet to be characterised. This systematic review aimed to identify up-to-date literature on tRNAs pre-sent within human EVs and explores their potential clinical significance in health and disease. A comprehensive and systematic literature search was performed, and the study was conducted in accordance with PRISMA guidelines. Electronic databases MEDLINE and EMBASE were searched up until 1st January 2022. From 685 papers, 60 studies were identified for analysis. The majority of papers reviewed focussed on the role of EV tRNAs in cancers (31.7%), with numerous other conditions represented. Blood and cell lines were the most common EV sources, representing 85.9% of protocols used. EV isolation methods included the most known methods, precipitation being the most common (49.3%). The proportion of EV tRNAs was highly variable, ranging be-tween 0.04% to >95% depending on tissue source. EV tRNAs are present in a multitude of sources and show promise as disease markers in breast cancer, gastrointestinal cancers, and other diseases. EV tRNA research is an emerging field, with increasing numbers of papers highlighting novel methodologies for tRNA and tRNA fragment discovery

Empirical Comparison of Distributed Source Localization Methods for Single-Trial Detection of Movement Preparation

The development of technologies for the treatment of movement disorders, like stroke, is still of particular interest in brain-computer interface (BCI) research. In this context, source localization methods (SLMs), that reconstruct the cerebral origin of brain activity measured outside the head, e.g., via electroencephalography (EEG), can add a valuable insight into the current state and progress of the treatment. However, in BCIs SLMs were often solely considered as advanced signal processing methods that are compared against other methods based on the classification performance alone. Though, this approach does not guarantee physiological meaningful results. We present an empirical comparison of three established distributed SLMs with the aim to use one for single-trial movement prediction. The SLMs wMNE, sLORETA, and dSPM were applied on data acquired from eight subjects performing voluntary arm movements. Besides the classification performance as quality measure, a distance metric was used to asses the physiological plausibility of the methods. For the distance metric, which is usually measured to the source position of maximum activity, we further propose a variant based on clusters that is better suited for the single-trial case in which several sources are likely and the actual maximum is unknown. The two metrics showed different results. The classification performance revealed no significant differences across subjects, indicating that all three methods are equally well-suited for single-trial movement prediction. On the other hand, we obtained significant differences in the distance measure, favoring wMNE even after correcting the distance with the number of reconstructed clusters. Further, distance results were inconsistent with the traditional method using the maximum, indicating that for wMNE the point of maximum source activity often did not coincide with the nearest activation cluster. In summary, the presented comparison might help users to select an appropriate SLM and to understand the implications of the selection. The proposed methodology pays attention to the particular properties of distributed SLMs and can serve as a framework for further comparisons

Narrow deeply bound K−K^- atomic states

Using optical potentials fitted to a comprehensive set of strong interaction level shifts and widths in $K^-$ atoms, we predict that the $K^-$ atomic levels which are inaccessible in the atomic cascade process are generally narrow, spanning a range of widths about 50 - 1500 keV over the entire periodic table. The mechanism for this narrowing is different from the mechanism for narrowing of pionic atom levels. Examples of such `deeply bound' $K^-$ atomic states are given, showing that in many cases these states should be reasonably well resolved. Several reactions which could be used to form these `deeply bound' states are mentioned. Narrow deeply bound states are expected also in $\bar{p}$ atoms.Comment: Revised, Phys. Lett B. in pres