50 research outputs found
Taxonomic diversity and identification problems of oncaeid microcopepods in the Mediterranean Sea
The species diversity of the pelagic microcopepod
family Oncaeidae collected with nets of 0.1-mm mesh
size was studied at 6 stations along a west-to-east transect
in the Mediterranean Sea down to a maximum depth of
1,000 m. A total of 27 species and two form variants have
been identified, including three new records for the
Mediterranean. In addition, about 20, as yet undescribed,
new morphospecies were found (mainly from the genera
Epicalymma and Triconia) which need to be examined
further. The total number of identified oncaeid species was
similar in the Western and Eastern Basins, but for some cooccurring
sibling species, the estimated numerical dominance
changed. The deep-sea fauna of Oncaeidae, studied
at selected depth layers between 400 m and the near-bottom
layer at >4,200 m depth in the eastern Mediterranean
(Levantine Sea), showed rather constant species numbers
down to ∼3,000 m depth. In the near-bottom layers, the
diversity of oncaeids declined and species of Epicalymma
strongly increased in numerical importance. The taxonomic
status of all oncaeid species recorded earlier in the
Mediterranean Sea is evaluated: 19 out of the 46 known
valid oncaeid species are insufficiently described, and most
of the taxonomically unresolved species (13 species) have
originally been described from this area (type locality). The
deficiencies in the species identification of oncaeids cast
into doubt the allegedly cosmopolitan distribution of some
species, in particular those of Mediterranean origin. The
existing identification problems even of well-described
oncaeid species are exemplified for the Oncaea mediacomplex,
including O. media Giesbrecht, O. scottodicarloi
Heron & Bradford-Grieve, and O. waldemari Bersano &
Boxshall, which are often erroneously identified as a single
species (O. media). The inadequacy in the species identification
of Oncaeidae, in particular those from the Atlantic
and Mediterranean, is mainly due to the lack of reliable
identification keys for Oncaeidae in warm-temperate and/or
tropical seas. Future efforts should be directed to the
construction of identification keys that can be updated
according to the latest taxonomic findings, which can be
used by the non-expert as well as by the specialist. The
adequate consideration of the numerous, as yet undescribed,
microcopepod species in the world oceans, in
particular the Oncaeidae, is a challenge for the study of the
structure and function of plankton communities as well as
for global biodiversity estimates
Seasonal variations in the nitrogen isotopic composition of settling particles at station K2 in the western subarctic North Pacific
Intensive observations using hydrographical cruises and moored sediment trap deployments during 2010 and 2012 at station K2 in the North Pacific western subarctic gyre (WSG) revealed seasonal changes in δ15N of both suspended and settling particles. Suspended particles (SUS) were collected from depths between the surface and 200 m; settling particles by drifting traps (DST; 100-200 m) and moored traps (MST; 200 and 500 m). All particles showed higher δ15N values in winter and lower in summer, contrary to the expected by isotopic fractionation during phytoplankton nitrate consumption. We suggest that these observed isotopic patterns are due to ammonium consumption via light-controlled nitrification, which could induce variations in δ15N(SUS) of 0.4-3.1 ‰ in the euphotic zone (EZ). The δ15N(SUS) signature was reflected by δ15 N(DST) despite modifications during biogenic transformation from suspended particles in the EZ. δ15 N enrichment (average: 3.6 ‰) and the increase in C:N ratio (by 1.6) in settling particles suggests year-round contributions of metabolites from herbivorous zooplankton as well as TEPs produced by diatoms. Accordingly, seasonal δ15 N(DST) variations of 2.4-7.0 ‰ showed a significant correlation with primary productivity (PP) at K2. By applying the observed δ15 N(DST) vs. PP regression to δ15 N(MST) of 1.9-8.0 ‰, we constructed the first annual time-series of PP changes in the WSG. Moreover, the monthly export ratio at 500 m was calculated using both estimated PP and measured organic carbon fluxes. Results suggest a 1.6 to 1.8 times more efficient transport of photosynthetically-fixed carbon to the intermediate layers occurs in summer/autumn rather than winter/spring
European and multi-ancestry genome-wide association meta-analysis of atopic dermatitis highlights importance of systemic immune regulation.
Atopic dermatitis (AD) is a common inflammatory skin condition and prior genome-wide association studies (GWAS) have identified 71 associated loci. In the current study we conducted the largest AD GWAS to date (discovery N = 1,086,394, replication N = 3,604,027), combining previously reported cohorts with additional available data. We identified 81 loci (29 novel) in the European-only analysis (which all replicated in a separate European analysis) and 10 additional loci in the multi-ancestry analysis (3 novel). Eight variants from the multi-ancestry analysis replicated in at least one of the populations tested (European, Latino or African), while two may be specific to individuals of Japanese ancestry. AD loci showed enrichment for DNAse I hypersensitivity and eQTL associations in blood. At each locus we prioritised candidate genes by integrating multi-omic data. The implicated genes are predominantly in immune pathways of relevance to atopic inflammation and some offer drug repurposing opportunities
Are Rhodophyceae a dietary component for deep-sea holothurians?
Eicosatetraenoic acid (20:4(n-G)), a polyunsaturated fatty acid (PURA), was found in deep-sea holothurians at a depth of nearly 5000 m in the temperate north-cast Atlantic. It has been suggested that deep-sea animals may be able to synthesize this compound de novo. Since this fatty acid is typical of Rhodophyceae, which has previously been found incorporated in gelatinous material captured in the deep sea, an alternative origin of this Fatty acid in the deep-sea holothurians is proposed