640 research outputs found
Dundee Discussion Papers in Economics 290:Income mobility and income inequality in Scottish agriculture
The Synergizer service for translating gene, protein and other biological identifiers
Summary: The Synergizer is a database and web service that provides translations of biological database identifiers. It is accessible both programmatically and interactively
Few smooth d-polytopes with n lattice points
We prove that, for fixed n there exist only finitely many embeddings of
Q-factorial toric varieties X into P^n that are induced by a complete linear
system. The proof is based on a combinatorial result that for fixed nonnegative
integers d and n, there are only finitely many smooth d-polytopes with n
lattice points. We also enumerate all smooth 3-polytopes with at most 12
lattice points. In fact, it is sufficient to bound the singularities and the
number of lattice points on edges to prove finiteness.Comment: 20+2 pages; major revision: new author, new structure, new result
Application of wastewater-based epidemiology to investigate stimulant drug, alcohol and tobacco use in Lithuanian communities
A novel method for the absolute fluorescence yield measurement by AIRFLY
One of the goals of the AIRFLY (AIR FLuorescence Yield) experiment is to
measure the absolute fluorescence yield induced by electrons in air to better
than 10% precision. We introduce a new technique for measurement of the
absolute fluorescence yield of the 337 nm line that has the advantage of
reducing the systematic uncertainty due to the detector calibration. The
principle is to compare the measured fluorescence yield to a well known process
- the Cerenkov emission. Preliminary measurements taken in the BFT (Beam Test
Facility) in Frascati, Italy with 350 MeV electrons are presented. Beam tests
in the Argonne Wakefield Accelerator at the Argonne National Laboratory, USA
with 14 MeV electrons have also shown that this technique can be applied at
lower energies.Comment: presented at the 5th Fluorescence Workshop, El Escorial - Madrid,
Spain, 16 - 20 September 200
Hierarchical Hough all-sky search for periodic gravitational waves in LIGO S5 data
We describe a new pipeline used to analyze the data from the fifth science
run (S5) of the LIGO detectors to search for continuous gravitational waves
from isolated spinning neutron stars. The method employed is based on the Hough
transform, which is a semi-coherent, computationally efficient, and robust
pattern recognition technique. The Hough transform is used to find signals in
the time-frequency plane of the data whose frequency evolution fits the pattern
produced by the Doppler shift imposed on the signal by the Earth's motion and
the pulsar's spin-down during the observation period. The main differences with
respect to previous Hough all-sky searches are described. These differences
include the use of a two-step hierarchical Hough search, analysis of
coincidences among the candidates produced in the first and second year of S5,
and veto strategies based on a test.Comment: 7 pages, 2 figures, Amaldi08 proceedings, submitted to JPC
Temperature and Humidity Dependence of Air Fluorescence Yield measured by AIRFLY
The fluorescence detection of ultra high energy cosmic rays requires a
detailed knowledge of the fluorescence light emission from nitrogen molecules
over a wide range of atmospheric parameters, corresponding to altitudes typical
of the cosmic ray shower development in the atmosphere. We have studied the
temperature and humidity dependence of the fluorescence light spectrum excited
by MeV electrons in air. Results for the 313.6 nm, 337.1 nm, 353.7 nm and 391.4
nm bands are reported in this paper. We found that the temperature and humidity
dependence of the quenching process changes the fluorescence yield by a
sizeable amount (up to 20%) and its effect must be included for a precise
estimation of the energy of ultra high energy cosmic rays.Comment: presented at the 5th Fluorescence Workshop, El Escorial - Madrid,
Spain, 16 - 20 September 2007, to appear in Nuclear Instruments and Methods
PhyloPat: an updated version of the phylogenetic pattern database contains gene neighborhood
Phylogenetic patterns show the presence or absence of certain genes in a set of full genomes derived from different species. They can also be used to determine sets of genes that occur only in certain evolutionary branches. Previously, we presented a database named PhyloPat which allows the complete Ensembl gene database to be queried using phylogenetic patterns. Here, we describe an updated version of PhyloPat which can be queried by an improved web server. We used a single linkage clustering algorithm to create 241 697 phylogenetic lineages, using all the orthologies provided by Ensembl v49. PhyloPat offers the possibility of querying with binary phylogenetic patterns or regular expressions, or through a phylogenetic tree of the 39 included species. Users can also input a list of Ensembl, EMBL, EntrezGene or HGNC IDs to check which phylogenetic lineage any gene belongs to. A link to the FatiGO web interface has been incorporated in the HTML output. For each gene, the surrounding genes on the chromosome, color coded according to their phylogenetic lineage can be viewed, as well as FASTA files of the peptide sequences of each lineage. Furthermore, lists of omnipresent, polypresent, oligopresent and anticorrelating genes have been included. PhyloPat is freely available at http://www.cmbi.ru.nl/phylopat
Enantiomeric profiling of quinolones and quinolones resistance gene qnrS in European wastewaters
- …