Oxygen minimum zone induced rapid temporal fluctuations of Eastern Baltic cod genetic diversity

Oxygen minimum zones are increasing, yet the effects of these zones on the genetic composition of marine fish stocks has been neglected. We assessed the combined effects of stock size and structure, and the prevailing oxygen situation, on Eastern Baltic cod (ICES SD25) genetic diversity. For this purpose, we used an integrative long-term otolith sample and data series (1995-2013) to (1) calculate the approximate number of females with surviving eggs in a given year, i.e., contributing to reproduction (n F), and (2) the annually resolved cohort mean allelic richness as proxy of genetic diversity, based on 12 microsatellite markers. Cohort mean allelic richness showed strong year-to-year fluctuations though no permanent decline. Importantly, it was highly correlated with n F, but with an unexpected 1.5 year time lag that may be an artefact of Eastern Baltic cod ageing problems. Our findings indicated that environmental pressure can effect rapid alterations in exploited fish stock genetic composition, and pointed to the importance of large females for Eastern Baltic cod reproduction during stagnation periods. Considering the importance of standing genetic variation for the evolutionary potential of populations, this is relevant for projections of the future state of cod stocks under global change

Hysteresis, Avalanches, and Disorder Induced Critical Scaling: A Renormalization Group Approach

We study the zero temperature random field Ising model as a model for noise and avalanches in hysteretic systems. Tuning the amount of disorder in the system, we find an ordinary critical point with avalanches on all length scales. Using a mapping to the pure Ising model, we Borel sum the $6-\epsilon$ expansion to $O(\epsilon^5)$ for the correlation length exponent. We sketch a new method for directly calculating avalanche exponents, which we perform to $O(\epsilon)$. Numerical exponents in 3, 4, and 5 dimensions are in good agreement with the analytical predictions.Comment: 134 pages in REVTEX, plus 21 figures. The first two figures can be obtained from the references quoted in their respective figure captions, the remaining 19 figures are supplied separately in uuencoded forma

Prevalence of Drug-Resistant HIV-1 Variants in Untreated Individuals in Europe: Implications for Clinical Management

BackgroundInfection with drug-resistant human immunodeficiency virus type 1 (HIV-1) can impair the response to combination therapy. Widespread transmission of drug-resistant variants has the disturbing potential of limiting future therapy options and affecting the efficacy of postexposure prophylaxis penta increase-spacing 1>MethodsWe determined the baseline rate of drug resistance in 2208 therapy-naive patients recently and chronically infected with HIV-1 from 19 European countries during 1996-2002 ResultsIn Europe, 1 of 10 antiretroviral-naive patients carried viruses with ⩾1 drug-resistance mutation. Recently infected patients harbored resistant variants more often than did chronically infected patients (13.5% vs. 8.7%; P=.006). Non-B viruses (30%) less frequently carried resistance mutations than did subtype B viruses (4.8% vs. 12.9%; P<.01). Baseline resistance increased over time in newly diagnosed cases of non-B infection: from 2.0% (1/49) in 1996-1998 to 8.2% (16/194) in 2000-2001 ConclusionsDrug-resistant variants are frequently present in both recently and chronically infected therapy-naive patients. Drug-resistant variants are most commonly seen in patients infected with subtype B virus, probably because of longer exposure of these viruses to drugs. However, an increase in baseline resistance in non-B viruses is observed. These data argue for testing all drug-naive patients and are of relevance when guidelines for management of postexposure prophylaxis and first-line therapy are update