Clinical decision making for prediction of otitis using machine learning approach

This study investigates the relationship between autoimmune disease otitis and gut microbial community abundance by using machine learning as an aid in the medical decision-making process. Stool samples of healthy and otitis diseased infants were obtained from the curatedMetagenomicData package. Class imbalance present in the dataset was handled by oversampling a minority class. Afterwards, we built several machine learning models (support vector machine, k-nn, artificial neural networks, random forest and gradient boosting) to predict otitis from gut microbial samples. The best overall accuracy was obtained by the random forest classifier, 0.99, followed by support vector machine and gradient boosting algorithms, both achieving 0.96 accuracy. We also obtained the most informative predictors as potential microbial biomarkers for otitis disease. The obtained results showed better accuracy in prediction of otitis from microbial metagenome than previously proposed methods found in literature

Evaluation of IBM Watson Natural Language Processing Service to predict influenza-like illness outbreaks from Twitter data

In this work we evaluate whether Watson NLP service can be used to reliably predict infectious disease such as influenza-like illness (ILI) outbreaks using Twitter data. Watson’s performance is evaluated by computing Pearson correlation coefficient between the number of tweets classified by Watson as ILI and the number of ILI occurrences recovered from traditional epidemic surveillance system of the Centers for Disease Control and Prevention (CDC). Achieved correlation was 0.55. Furthermore, a 12-week discrepancy was found between peak occurrences of ILI predicted by Watson and CDC reported data. Additionally, we developed a scoring method for ILI prediction from a Twitter post using a simple formula with the ability to predict ILI two weeks ahead of ILI data as reported by CDC. The obtained results suggest that data found within social media can be used to supplement the traditional surveillance in epidemics of infectious diseases such as influenza or more recently COVID-19 with the help of intelligent computation

Assessment of multi-exposure HDR image deghosting methods

© 2017 Elsevier LtdTo avoid motion artefacts when merging multiple exposures into a high dynamic range image, a number of HDR deghosting algorithms have been proposed. However, these algorithms do not work equally well on all types of scenes, and some may even introduce additional artefacts. As the number of proposed deghosting methods is increasing rapidly, there is an immediate need to evaluate them and compare their results. Even though subjective methods of evaluation provide reliable means of testing, they are often cumbersome and need to be repeated for each new proposed method or even its slight modification. Because of that, there is a need for objective quality metrics that will provide automatic means of evaluation of HDR deghosting algorithms. In this work, we explore several computational approaches of quantitative evaluation of multi-exposure HDR deghosting algorithms and demonstrate their results on five state-of-the-art algorithms. In order to perform a comprehensive evaluation, a new dataset consisting of 36 scenes has been created, where each scene provides a different challenge for a deghosting algorithm. The quality of HDR images produced by deghosting method is measured in a subjective experiment and then evaluated using objective metrics. As this paper is an extension of our conference paper, we add one more objective quality metric, UDQM, as an additional metric in the evaluation. Furthermore, analysis of objective and subjective experiments is performed and explained more extensively in this work. By testing correlation between objective metric and subjective scores, the results show that from the tested metrics, that HDR-VDP-2 is the most reliable metric for evaluating HDR deghosting algorithms. The results also show that for most of the tested scenes, Sen et al.'s deghosting method outperforms other evaluated deghosting methods. The observations based on the obtained results can be used as a vital guide in the development of new HDR deghosting algorithms, which would be robust to a variety of scenes and could produce high quality results