Shifts in malaria vector species composition and transmission dynamics along the Kenyan coast over the past 20 years

BACKGROUND: Over the past 20 years, numerous studies have investigated the ecology and behaviour of malaria vectors and Plasmodium falciparum malaria transmission on the coast of Kenya. Substantial progress has been made to control vector populations and reduce high malaria prevalence and severe disease. The goal of this paper was to examine trends over the past 20 years in Anopheles species composition, density, blood-feeding behaviour, and P. falciparum sporozoite transmission along the coast of Kenya. METHODS: Using data collected from 1990 to 2010, vector density, species composition, blood-feeding patterns, and malaria transmission intensity was examined along the Kenyan coast. Mosquitoes were identified to species, based on morphological characteristics and DNA extracted from Anopheles gambiae for amplification. Using negative binomial generalized estimating equations, mosquito abundance over the period were modelled while adjusting for season. A multiple logistic regression model was used to analyse the sporozoite rates. RESULTS: Results show that in some areas along the Kenyan coast, Anopheles arabiensis and Anopheles merus have replaced An. gambiae sensu stricto (s.s.) and Anopheles funestus as the major mosquito species. Further, there has been a shift from human to animal feeding for both An. gambiae sensu lato (s.l.) (99% to 16%) and An. funestus (100% to 3%), and P. falciparum sporozoite rates have significantly declined over the last 20 years, with the lowest sporozoite rates being observed in 2007 (0.19%) and 2008 (0.34%). There has been, on average, a significant reduction in the abundance of An. gambiae s.l. over the years (IRR = 0.94, 95% CI 0.90–0.98), with the density standing at low levels of an average 0.006 mosquitoes/house in the year 2010. CONCLUSION: Reductions in the densities of the major malaria vectors and a shift from human to animal feeding have contributed to the decreased burden of malaria along the Kenyan coast. Vector species composition remains heterogeneous but in many areas An. arabiensis has replaced An. gambiae as the major malaria vector. This has important implications for malaria epidemiology and control given that this vector predominately rests and feeds on humans outdoors. Strategies for vector control need to continue focusing on tools for protecting residents inside houses but additionally employ outdoor control tools because these are essential for further reducing the levels of malaria transmission

Screening of Local Bacillus thuringiensis Isolates for Toxicity to Chilo partellus, Sesamia calamistis and Busseola fusca in Kenya

Stem borers are a major source of pre-harvest maize crop losses in Kenya and many Sub- Saharan African countries. This menace needs to be addressed if food security is to be realized in this region. Seven local isolates of Bacillus thuringiensis (Bt) strains were isolated from soils collected from Kakamega and Machakos districts in Kenya. They were screened for toxicity against 1st and 2nd instar larvae of Chilo partellus, Sesamia calamistis and Busseola fusca through laboratory bioassays on artificial and natural diets. On farm Bt toxin potency trials were carried out only in Machakos using isolate 1M which was isolated from the area. The various isolates showed differences in their toxicity to the three stem borers. Isolates 1M and VM-10 (from Machakos district) were found to be the most potent against C. partellus with larval mortalities of 100 % within 72 h. Their LD50 values were 0.004 mg/ml and 0.04 mg/ml respectively. The most toxic isolates against S. calamistis were, 44M, VM-10 and 1M, with larval mortalities of 73%, 64% and 62% respectively after 72h at a concentration of 8.6 mg/ml through artificial diet bioassays on 1st instar larvae. Isolates 44M and K10-2 showed high toxicity against B. fusca with larval mortalities of 20% by artificial diet bioassays and 44% by maize leaf bioassays respectively. Leaf disk bioassays with all the insect species showed higher larval mortalities than those done with the artificial diet bioassays indicating the larval preference of natural diet. However leaf disk bioassays with B. fusca recorded higher larval mortalities with sorghum than maize leaves. Field trial results obtained from Machakos district using a biopesticide made from isolate 1M indicated that it was highly effective in stem borer control. Keywords: Bacillus thuringiensis; bioassays; B. fusca; C. partellus; S. calamistis; insect larvae; mortality; toxicity. J. Trop. Microbiol. Biotechnol. Vol. 3 (2) 2007: pp. 27-3

Soil microbial community response to land use change in an agricultural landscape of Western Kenya

Tropical agroecosystems are subject to degradation processes such as losses in soil carbon, nutrient depletion, and reduced water holding capacity that occur rapidly resulting in a reduction in soil fertility that can be difficult to reverse. In this research, a polyphasic methodology has been used to investigate changes in microbial community structure and function in a series of tropical soils in western Kenya. These soils have different land usage with both wooded and agricultural soils at Kakamega and Ochinga, whereas at Ochinga, Leuro, Teso, and Ugunja a replicated field experiment compared traditional continuous maize cropping against an improved N-fixing fallow system. For all sites, principal component analysis of 16S rRNA gene denaturing gradient gel electrophoresis (DGGE) profiles revealed that soil type was the key determinant of total bacterial community structure, with secondary variation found between wooded and agricultural soils. Similarly, phospholipid fatty acid (PLFA) analysis also separated wooded from agricultural soils, primarily on the basis of higher abundance of monounsaturated fatty acids, anteiso- and iso-branched fatty acids, and methyl-branched fatty acids in the wooded soils. At Kakamega and Ochinga wooded soils had between five 5 and 10-fold higher levels of soil carbon and microbial biomass carbon than agricultural soils from the same location, whereas total enzyme activities were also lower in the agricultural sites. Soils with woody vegetation had a lower percentage of phosphatase activity and higher cellulase and chitinase activities than the agricultural soils. BIOLOG analysis showed woodland soils to have the greatest substrate diversity. Throughout the study the two functional indicators (enzyme activity and BIOLOG), however, showed lower specificity with respect to soil type and land usage than did the compositional indicators (DGGE and PLFA). In the field experiment comparing two types of maize cropping, both the maize yields and total microbial biomass were found to increase with the fallow system. Moreover, 16S rRNA gene and PLFA analyses revealed shifts in the total microbial community in response to the different management regimes, indicating that deliberate management of soils can have considerable impact on microbial community structure and function in tropical soils. © Springer Science+Business Media, Inc. 2005