Measurements and comparison of primary biological aerosol above and below a tropical forest canopy using a dual channel fluorescence spectrometer

Original article can be found at: http://www.atmos-chem-phys.net/10/issue10.html Copyright - the authors. Authors grant any third party the right to use the article freely as long as its original authors and citation details are identified. The article and any associated published material is distributed under the Creative Commons Attribution 3.0 License.Aerosol particle size distributions were measured below and above a tropical rainforest canopy in Borneo, Malaysia, in June/July 2008 using the WIBS-3: a single particle dual channel fluorescence spectrometer. Material in the size range 0.8–20 μm was characterized according to optical equivalent diameter (DP), morphology and fluorescence at 310–400 nm and 400–600 nm following excitation at 280 nm and 370 nm respectively. Particles fluorescent after both excitations are likely to be fluorescent primary biological aerosol particles (FBAP). Measured FBAP number concentration (NFBAP) at both sites exhibited clear diurnal cycles. The largest variability was observed in the understorey, where NFBAP reached a minimum of 50–100 L−1 in late morning. In mid afternoon it exhibited strong transient fluctuations as large as 4000 L−1 that were followed by sustained concentrations of 1000–2500 L−1 that reduced steadily between midnight and sunrise. Above the canopy FBAP number ranged from 50–100 L−1 during the daytime to 200–400 L−1 at night but did not exhibit the transient enhancements seen in the understorey. The strong FBAP fluctuations were attributed to the release of fungal spores below the canopy and appeared to be linked to elevated relative humidity. The mean FBAP number fraction in the size range 0.8 μm<DP<20 μm was 55% in the understorey and 28% above canopy. A size mode at 2 μm<DP<4 μm appears at both sites and is primarily FBAP, which dominated the coarse (DP≥2.5 μm) number concentration at both sites, accounting for 75% in the understorey and 57% above the canopy. In contrast, the concentration of non-fluorescent particles (NNON) at both sites was typically 200–500 L−1, the majority of which occupied a size mode at 0.8<DP<1.5 μm. Enhanced understorey NNON was observed daily in mid-afternoon and also at midday on three occasions: the former coincided with the FBAP enhancements and measured approximately 10% of their magnitude; the latter occurred independently of the NFBAP diurnal cycle and comprised particles smaller than 2 μm. Particle diameter of 3–5 μm is consistent with smaller fungal spores, though absolute identification of biological species is not possible with the UV-LIF technique. Based on the measured FBAP and non-fluorescent particle abundances and their observed recovery times following rain showers, FBAP originated beneath the canopy while the non-fluorescent material was transported from further away. It is concluded that these separate sources contributed the majority of the aerosol measured by the WIBS-3 at both sites.Peer reviewe

Investigating the relationship between HIV testing and risk behaviour in Britain: National Survey of Sexual Attitudes and Lifestyles 2000.

OBJECTIVES: To estimate the prevalence of, and identify factors associated with, HIV testing in Britain. DESIGN: A large, stratified probability sample survey of sexual attitudes and lifestyles. METHODS: A total of 12,110 16-44 year olds completed a computer-assisted face-to-face interview and self-interview. Self-reports of HIV testing, i.e. the timing, reasons for and location of testing, were included. RESULTS: A total of 32.4% of men and 31.7% of women reported ever having had an HIV test, the majority of whom were tested through blood donation. When screening for blood donation and pregnancy were excluded, 9.0% of men and 4.6% of women had had a voluntary confidential HIV test (VCT) in the past 5 years. However, one third of injecting drug users and men who have sex with men had a VCT in the past 5 years. VCT in the past 5 years was significantly associated with age, residence, ethnicity, self-perceived HIV risk, reporting greater numbers of sexual partners, new sexual partners from abroad, previous sexually transmitted infection diagnosis, and injecting non-prescribed drugs for men and women, and same-sex partners (men only). Whereas sexually transmitted disease clinics were important sites for VCT, general practice accounted for almost a quarter of VCT. CONCLUSION: HIV testing is relatively common in Britain; however, it remains largely associated with population-based blood donation and antenatal screening programmes. In contrast, VCT remains highly associated with high-risk (sexual or drug-injecting) behaviours or population sub-groups at high risk. Strategies to reduce undiagnosed prevalent HIV infection will require further normalization and wider uptake of HIV testing

Light scattering and phase behavior of Lysozyme-PEG mixtures

Measurements of liquid-liquid phase transition temperatures (cloud points) of mixtures of a protein (lysozyme) and a polymer, poly(ethylene glycol) (PEG) show that the addition of low molecular weight PEG stabilizes the mixture whereas high molecular weight PEG was destabilizing. We demonstrate that this behavior is inconsistent with an entropic depletion interaction between lysozyme and PEG and suggest that an energetic attraction between lysozyme and PEG is responsible. In order to independently characterize the lysozyme/PEG interactions, light scattering experiments on the same mixtures were performed to measure second and third virial coefficients. These measurements indicate that PEG induces repulsion between lysozyme molecules, contrary to the depletion prediction. Furthermore, it is shown that third virial terms must be included in the mixture's free energy in order to qualitatively capture our cloud point and light scattering data. The light scattering results were consistent with the cloud point measurements and indicate that attractions do exist between lysozyme and PEG.Comment: 5 pages, 2 figures, 1 tabl

Satellite observation and mapping of wintertime ozone variability in the lower stratosphere

Comparison is made between 30 mbar ozone fields that are generated by a transport chemistry model utilizing the winds from the Goddard Space Flight Center stratospheric data assimilation system (STRATAN), observations from the LIMS instrument on Nimbus-7, and the ozone fields that result from 'flying a mathematical simulation of LIMS observations through the transport chemistry model ozone fields. The modeled ozone fields were found to resemble the LIMS observations, but the model fields show much more temporal and spatial structure than do the LIMS observations. The 'satellite mapped' model results resemble the LIMS observations much more closely. These results are very consistent with the earlier discussions of satellite space-time sampling by Salby

The devil is in the third year: a longitudinal study of erosion of empathy in medical school.

PURPOSE: This longitudinal study was designed to examine changes in medical students\u27 empathy during medical school and to determine when the most significant changes occur. METHOD: Four hundred fifty-six students who entered Jefferson Medical College in 2002 (n = 227) and 2004 (n = 229) completed the Jefferson Scale of Physician Empathy at five different times: at entry into medical school on orientation day and subsequently at the end of each academic year. Statistical analyses were performed for the entire cohort, as well as for the matched cohort (participants who identified themselves at all five test administrations) and the unmatched cohort (participants who did not identify themselves in all five test administrations). RESULTS: Statistical analyses showed that empathy scores did not change significantly during the first two years of medical school. However, a significant decline in empathy scores was observed at the end of the third year which persisted until graduation. Findings were similar for the matched cohort (n = 121) and for the rest of the sample (unmatched cohort, n = 335). Patterns of decline in empathy scores were similar for men and women and across specialties. CONCLUSIONS: It is concluded that a significant decline in empathy occurs during the third year of medical school. It is ironic that the erosion of empathy occurs during a time when the curriculum is shifting toward patient-care activities; this is when empathy is most essential. Implications for retaining and enhancing empathy are discussed

A Role for the Vacuolating Cytotoxin, VacA, in Colonization and Helicobacter pylori-Induced Metaplasia in the Stomach

Carriage of Helicobacter pylori strains producing more active (s1/i1) forms of VacA is strongly associated with gas-tric adenocarcinoma. To our knowledge, we are the first to determine effects of different polymorphic forms of VacA on inflammation and metaplasia in the mouse stomach. Bacteria producing the less active s2/i2 form of VacA colonized mice more efficiently than mutants null for VacA or producing more active forms of it, providing the first evidence of a positive role for the minimally active s2/i2 toxin. Strains producing more active toxin forms induced more severe and extensive metaplasia and in flammation in the mouse stomach than strains producing weakly active (s2/i2) toxin. We also examined the association in humans, controlling for cag PAI status. In human gastric biopsy specimens, the vacA i1 allele was strongly associated with precancerous intestinal metaplasia, with almost complete absence of intestinal metaplasia in subjects infected with i2-type strains, even in a vacA s1, cagA+ background