Functional Genomics of Brain Aging and Alzheimer’s Disease: Focus on Selective Neuronal Vulnerability

Pivotal brain functions, such as neurotransmission, cognition, and memory, decline with advancing age and, especially, in neurodegenerative conditions associated with aging, such as Alzheimer’s disease (AD). Yet, deterioration in structure and function of the nervous system during aging or in AD is not uniform throughout the brain. Selective neuronal vulnerability (SNV) is a general but sometimes overlooked characteristic of brain aging and AD. There is little known at the molecular level to account for the phenomenon of SNV. Functional genomic analyses, through unbiased whole genome expression studies, could lead to new insights into a complex process such as SNV. Genomic data generated using both human brain tissue and brains from animal models of aging and AD were analyzed in this review. Convergent trends that have emerged from these data sets were considered in identifying possible molecular and cellular pathways involved in SNV. It appears that during normal brain aging and in AD, neurons vulnerable to injury or cell death are characterized by significant decreases in the expression of genes related to mitochondrial metabolism and energy production. In AD, vulnerable neurons also exhibit down-regulation of genes related to synaptic neurotransmission and vesicular transport, cytoskeletal structure and function, and neurotrophic factor activity. A prominent category of genes that are up-regulated in AD are those related to inflammatory response and some components of calcium signaling. These genomic differences between sensitive and resistant neurons can now be used to explore the molecular underpinnings of previously suggested mechanisms of cell injury in aging and AD

Homocysteine, type 2 diabetes mellitus, and cognitive performance: The Maine-Syracuse Study

Type 2 diabetes mellitus and higher total plasma homocysteine concentrations are each associated with an increased incidence of cardiovascular disease and with diminished cognitive performance. Relations between homocysteine concentrations and cardiovascular disease incidence are stronger in the presence of type 2 diabetes mellitus. Therefore, we hypothesized that relations between homocysteine concentrations and cognitive performance would be stronger in the presence of type 2 diabetes. We related homocysteine concentrations and cognitive performance on the Mini-Mental State Examination in 817 dementia- and stroke-free participants of the Maine-Syracuse Study, 90 of whom were classified with type 2 diabetes mellitus. Regardless of statistical adjustment for age, sex, gender, vitamin co-factors (folate, vitamin B6, vitamin B12), cardiovascular disease risk factors, and duration and type of treatment for type 2 diabetes mellitus, statistically significant inverse associations between homocysteine concentrations and cognitive performance were observed for diabetic individuals. The weaker inverse associations between homocysteine concentrations and cognitive performance obtained for non-diabetic individuals were not robust to statistical adjustment for some covariates. Interactions between homocysteine concentrations and type 2 diabetes mellitus are observed such that associations between homocysteine and cognitive performance are stronger in the presence of diabetes

Apresentação clínica e análise molecular do gene da arginina-vasopressina neurofisina II de pacientes com diabetes insípido central idiopático com longo seguimento

INTRODUCTION: Central diabetes insipidus (DI) characterized by polyuria, polydipsia and inability to concentrate urine, has different etiologies including genetic, autoimmune, post-traumatic, among other causes. Autosomal dominant central DI presents the clinical feature of a progressive decline of arginine-vasopressin (AVP) secretion. OBJECTIVE: In this study, we characterized the clinical features and sequenced the AVP-NPII gene of seven long-term follow-up patients with idiopathic central DI in an attempt to determine whether a genetic cause would be involved. METHODS: The diagnosis of central DI was established by fluid deprivation test and hyper-tonic saline infusion. For molecular analysis, genomic DNA was extracted and the AVP-NPII gene was amplified by polymerase chain reaction and sequenced. RESULTS: Sequencing analysis revealed a homozygous guanine insertion in the intron 2 (IVS2 +28 InsG) of the AVP-NPII gene in four patients, which represents an alternative gene assembly. No mutation in the code region of the AVP-NPII gene was found. CONCLUSIONS: The homozygous guanine insertion in intron 2 (IVS2 +28 InsG) is unlikely to contribute to the AVP-NPII gene modulation in DI. In addition, the etiology of idiopathic central DI in children may not be apparent even after long-term follow-up, and requires continuous etiological surveillance.INTRODUÇÃO: O diabetes insípido (DI) central, caracterizado por poliúria, polidipsia e inabilidade em concentrar a urina, apresenta diferentes etiologias, incluindo causas genética, autoimune, pós-traumática, entre outras. O DI central autossômico dominante apresenta a característica clínica de falência progressiva da secreção da arginina-vasopressina (AVP). OBJETIVO: No presente estudo, caracterizou-se a apresentação clínica e sequenciou-se o gene AVP-NPII de sete pacientes com DI central idiopático seguidos de longa data na tentativa de determinar se uma causa genética estava envolvida na etiologia. MÉTODOS: O diagnóstico do DI central foi estabelecido por meio do teste de jejum hídrico e infusão de salina hipertônica. Para a realização da análise molecular, o DNA genômico foi extraído e o gene AVP-NPII foi amplificado pela reação em cadeia da polimerase e, posteriormente, sequenciado. RESULTADOS: A análise do sequenciamento do gene AVP-NPII revelou uma inserção em homozigose de uma guanina no íntron 2 (IVS2 +28 InsG) em quatro pacientes, correspondendo a um arranjo alternativo do gene. Nenhuma mutação da região codificadora do gene AVP-NPII foi encontrada. CONCLUSÕES: A inserção em homozigose de uma guanina no íntron 2 (IVS2 +28 InsG) provavelmente não contribui na modulação do gene AVP-NPII no DI. Adicionalmente, a etiologia do DI central idiopático em crianças pode não se tornar evidente mesmo após um longo período de seguimento, necessitando de contínua vigilância da etiologia

Flows on Graphs with Random Capacities

We investigate flows on graphs whose links have random capacities. For binary trees we derive the probability distribution for the maximal flow from the root to a leaf, and show that for infinite trees it vanishes beyond a certain threshold that depends on the distribution of capacities. We then examine the maximal total flux from the root to the leaves. Our methods generalize to simple graphs with loops, e.g., to hierarchical lattices and to complete graphs.Comment: 8 pages, 6 figure

Double diffusivity model under stochastic forcing

The "double diffusivity" model was proposed in the late 1970s, and reworked in the early 1980s, as a continuum counterpart to existing discrete models of diffusion corresponding to high diffusivity paths, such as grain boundaries and dislocation lines. It was later rejuvenated in the 1990s to interpret experimental results on diffusion in polycrystalline and nanocrystalline specimens where grain boundaries and triple grain boundary junctions act as high diffusivity paths. Technically, the model pans out as a system of coupled Fick-type diffusion equations to represent "regular" and "high" diffusivity paths with "source terms" accounting for the mass exchange between the two paths. The model remit was extended by analogy to describe flow in porous media with double porosity, as well as to model heat conduction in media with two nonequilibrium local temperature baths, e.g., ion and electron baths. Uncoupling of the two partial differential equations leads to a higher-ordered diffusion equation, solutions of which could be obtained in terms of classical diffusion equation solutions. Similar equations could also be derived within an "internal length" gradient (ILG) mechanics formulation applied to diffusion problems, i.e., by introducing nonlocal effects, together with inertia and viscosity, in a mechanics based formulation of diffusion theory. While being remarkably successful in studies related to various aspects of transport in inhomogeneous media with deterministic microstructures and nanostructures, its implications in the presence of stochasticity have not yet been considered. This issue becomes particularly important in the case of diffusion in nanopolycrystals whose deterministic ILG-based theoretical calculations predict a relaxation time that is only about one-tenth of the actual experimentally verified time scale. This article provides the "missing link" in this estimation by adding a vital element in the ILG structure, that of stochasticity, that takes into account all boundary layer fluctuations. Our stochastic-ILG diffusion calculation confirms rapprochement between theory and experiment, thereby benchmarking a new generation of gradient-based continuum models that conform closer to real-life fluctuating environments

Review of rigorous coupled-wave analysis and of homogeneous effective medium approximations for high spatial-frequency surface-relief gratings

A review of the rigorous coupled-wave analysis as applied to the diffraction of electro-magnetic waves by gratings is presented. The analysis is valid for any polarization, angle of incidence, and conical diffraction. Cascaded and/or multiplexed gratings as well as material anisotropy can be incorporated under the same formalism. Small period rectangular groove gratings can also be modeled using approximately equivalent uniaxial homogeneous layers (effective media). The ordinary and extraordinary refractive indices of these layers depend on the gratings filling factor, the refractive indices of the substrate and superstrate, and the ratio of the freespace wavelength to grating period. Comparisons of the homogeneous effective medium approximations with the rigorous coupled-wave analysis are presented. Antireflection designs (single-layer or multilayer) using the effective medium models are presented and compared. These ultra-short period antireflection gratings can also be used to produce soft x-rays. Comparisons of the rigorous coupled-wave analysis with experimental results on soft x-ray generation by gratings are also included

Production of phosphate biofertilizers as a booster for the techno-economic and environmental performance of a first-generation sugarcane ethanol and sugar biorefinery.

A B S T R A C T The intensive use of fertilizers and pesticides in agriculture has a significant economic and environmental impact worldwide. Biofertilizers (aka microbial inoculants) could be a potential alternative to decrease costs and the environmental footprint linked to the use of fertilizers while boosting productivity through biological processes. This work aimed to perform a techno-economic-environmental assessment of an industrial biofertilizer production facility integrated with a sugarcane ethanol biorefinery. To this end, systems engineering tools were employed concurrently with techno-economic-environmental analyses to assess the integration of the different processes and their feasibility. Three processes for biofertilizer production are proposed varying in terms of downstream processing and the use of single or double microorganisms. Our findings indicate that the integration of biofertilizer production can enhance the biorefinery’s NPV by as much as 137% in the most favorable scenario and by a minimum of 69% in the most unfavorable scenario. Regarding environmental consequences, in general, all scenarios demonstrate an improvement over the base scenario. Global sensitivity analysis showed that the solid-state fermentation and composite formulation steps of the biofertilizer process have the most substantial influence on both economic and environmental outcomes. The uncertainty analysis further unveils that the scenarios without fungus separation exhibited greater resilience in the face of market volatility. The retro-techno-economic study defined the economically viable region. Ultimately, this study demonstrates that the integration of biofertilizers into an ethanol and sugar biorefinery is a more sustainable alternative than the isolated biorefinery regarding the environmental and techno-economic aspects of sustainability

Homocysteine, Folate, and Vitamins B\u3csub\u3e6\u3c/sub\u3e and B\u3csub\u3e12\u3c/sub\u3e Blood Levels in Relation to Cognitive Performance: The Maine-Syracuse Study

Objective: Our objective was to examine associations among plasma homocysteine concentrations (tHcy), the tHcy-cofactors (folate, vitamins B6 and B12), and multiple domains of cognitive performance, with statistical adjustment for possible confounds, including cardiovascular disease risk factors (CVD-RF) and cardiovascular disease (CVD). Methods: Subjects were 812 partici- pants (58% women) of the Maine-Syracuse study who were free of dementia and stroke. Employing a cross-sectional design and multiple regression analyses, fasting concentrations of tHcy and its vitamin cofactors (folate, B6, and B12) were related to multiple domains of cognitive performance. Results: With adjustment for age, education, gender, ethnicity, and the vitamins, tHcy was inversely associated with visual-spatial organization, working memory, scanning-tracking, and abstract reasoning. The same results were found with adjustment for age, education, gender, ethnicity, CVD-RF, and CVD. Vitamin cofactors were positively related to cognitive performance, but with adjustment for CVD-RF and CVD, only vitamin B6 was related to multiple cognitive domains. Conclusions: The inverse association of tHcy with multiple domains of cognitive functioning is not necessarily dependent on vitamin levels, vitamin deficiency, prevalent CVD risk factors, and manifest CVD. Serum folate, serum B12, and plasma B6 vitamin concentrations are positively associated with cognitive performance. Investigation of other possible mechanisms (e.g., tHcy neurotoxicity) mediating tHcy associations with cognitive performance is important, as are clinical trials examining the efficacy of folate, vitamin B6, and vitamin B12 for maintenance of cognitive functioning

Adrenal insufficiency

Os glicocorticóides apresentam um importante papel na regulação metabólica, nos sistemas cardiovascular, imune, nervoso, e na resposta adaptativa ao estresse. A insuficiência adrenal pode ser causada por uma doença primária da adrenal (baixas concentrações plasmáticas de cortisol e altas de ACTH) ou secundária a doenças do eixo hipotálamoipofisário (baixas concentrações plasmáticas de cortisol e de ACTH). A falta crônica de glicocorticóide leva a sintomas insidiosos e inespecíficos (mal-estar geral, fraqueza, inapetência, perda de peso, queixas gastrintestinais). Adicionalmente, quando há também deficiência de mineralocorticóide, a hipotensão, síncope, desidratação e choque cardiocirculatório, com hiponatremia e hipercalemia podem associar-se ao quadro clínico. O tratamento consiste na reposição de cortisol (hidrocortisona VO, 12 a 15 mg/m2 de superfície corporal, acetato de cortisona VO, 25mg/dia e prednisona VO, 5 a 10 mg/dia) na insuficiência adrenal secundária e de cortisol e minelocorticóide (9a fluorohidrocortisona VO, 0,1mg/dia) na primária. Doenças infecciosas, traumas e cirurgias podem precipitar uma crise aguda, chamada crise addisoniana, situação esta de risco de vida, quando não tratada. O tratamento consiste de reposição do volume intravascular com cloreto de sódio (soro fisiológico 0,9% 2 L/hora) e glicocorticóides (100 mg EV de hidrocortisona a cada 6 h). Desde que a crise addisoniana é freqüentemente desencadeada por processo infeccioso, o diagnóstico de infecção deve ser confirmado e, se presente, o uso de antibioticoterapia deve ser preconizado.  Glucocorticoids have an important role in the metabolic regulation, in the cardiovascular, immune, and nervous systems, and in the adaptive response to stress. The adrenal insufficiency can be caused by a primary disease of the adrenal (low concentration of cortisol and high ACTH levels) or secondary to the hypothalamic-pituitary dysfunction (low cortisol and ACTH levels). Chronic glucocorticoid deficiency leads to insidious and unspecific symptoms (weakness, fadigue, gastrintestinal symptoms, anorexia, loss of weight). In the presence of mineralocorticoid deficiency clinical findings are also associated to hypotension, syncope, dehydration and circulatory shock, with hiponatremia and hiperkalemia. Management consists of cortisol replacement (hydrocortisone PO, 12-15 mg/m2 cortisone acetate PO, 25mg/day or prednisone PO, 5-10 mg/day) for secondary adrenal insufficiency and cortisol and mineralocorticoid replacement (9a fluorohydrocortisone PO, 0.1mg/dia) for primary cause of adrenal insufficiency. Infections, traumas and surgeries can precipitate an acute crisis, Addisonian crisis, a life- threatening situation if not treated. Treatment consists of replacing intravascular volume with sodium chloride (0.9% NaCl 2L/h) and glucocorticoid (100 mg IV of hydrocortisone every 6 hours). Addisonian crisis is frequently associated with infection, therefore this diagnosis must be confirmed and properly treated with antibiotics