Measuring Organic Molecular Emission in Disks with Low Resolution Spitzer Spectroscopy

We explore the extent to which Spitzer IRS spectra taken at low spectral resolution can be used in quantitative studies of organic molecular emission from disks surrounding low mass young stars. We use Spitzer IRS spectra taken in both the high and low resolution modules for the same sources to investigate whether it is possible to define line indices that can measure trends in the strength of the molecular features in low resolution data. We find that trends in HCN emission strength seen in the high resolution data can be recovered in low resolution data. In examining the factors that influence the HCN emission strength, we find that the low resolution HCN flux is modestly correlated with stellar accretion rate and X-ray luminosity. Correlations of this kind are perhaps expected based on recent observational and theoretical studies of inner disk atmospheres. Our results demonstrate the potential of using the large number of low resolution disk spectra that reside in the Spitzer archive to study the factors that influence the strength of molecular emission from disks. Such studies would complement results for the much smaller number of circumstellar disks that have been observed at high resolution with IRS

A Spitzer Survey of Mid-Infrared Molecular Emission from Protoplanetary Disks II: Correlations and LTE Models

We present an analysis of Spitzer-IRS observations of H2O, OH, HCN, C2H2, and CO2 emission, and Keck-NIRSPEC observations of CO emission, from a diverse sample of T Tauri and Herbig Ae/Be circumstellar disks. We find that detections and strengths of most mid-IR molecular emission features are correlated with each other, suggesting a common origin and similar excitation conditions. We note that the line detection efficiency is anti-correlated with the 13/30 um SED spectral slope, which is a measure of the degree of grain settling in the disk atmosphere. We also note a correlation between detection efficiency and H-alpha equivalent width, and tentatively with accretion rate, suggesting that accretional heating contributes to line excitation. If detected, H2O line fluxes are correlated with the mid-IR continuum flux, and other co-varying system parameters, such as L_star. However, significant sample variation, especially in molecular line ratios, remains. LTE models of the H2O emission show that line strength is primarily related to the best-fit emitting area, and this accounts for most source-to-source variation in H2O emitted flux. Best-fit temperatures and column densities cover only a small range of parameter space, near 10^{18} cm-2 and 450 K for all sources, suggesting a high abundance of H2O in many planet-forming regions. Other molecules have a range of excitation temperatures from ~500-1500 K, also consistent with an origin in planet-forming regions. We find molecular ratios relative to water of ~10^{-3} for all molecules, with the exception of CO, for which n(CO)/n(H2O)~1. However, LTE fitting caveats and differences in the way thermo-chemical modeling results are reported make comparisons with such models difficult, and highlight the need for additional observations coupled with the use of line-generating radiative transfer codes

Transitional disks and their origins: an infrared spectroscopic survey of Orion A

Transitional disks are protoplanetary disks around young stars, with inner holes or gaps which are surrounded by optically thick outer, and often inner, disks. Here we present observations of 62 new transitional disks in the Orion A star-forming region. These were identified using the \textit{Spitzer Space Telescope}'s Infrared Spectrograph and followed up with determinations of stellar and accretion parameters using the Infrared Telescope Facility's SpeX. We combine these new observations with our previous results on transitional disks in Taurus, Chamaeleon I, Ophiuchus and Perseus, and with archival X-ray observations. This produces a sample of 105 transitional disks of "cluster" age 3 Myr or less, by far the largest hitherto assembled. We use this sample to search for trends between the radial structure in the disks and many other system properties, in order to place constraints on the possible origins of transitional disks. We see a clear progression of host star accretion rate and the different disk morphologies. We confirm that transitional disks with complete central clearings have median accretion rates an order of magnitude smaller than radially continuous disks of the same population. Pre-transitional disks --- those objects with gaps that separate inner and outer disks --- have median accretion rates intermediate between the two. Our results from the search for statistically significant trends, especially related to $\dot{M}$, strongly support that in both cases the gaps are far more likely to be due to the gravitational influence of Jovian planets or brown dwarfs orbiting within the gaps, than to any of the photoevaporative, turbulent or grain-growth processes that can lead to disk dissipation. We also find that the fraction of Class II YSOs which are transitional disks is large, 0.1-0.2, especially in the youngest associations.Comment: 96 pages, 25 figures, resubmitted to Ap

Atomic Diagnostics of X-ray Irradiated Protoplanetary Disks

We study atomic line diagnostics of the inner regions of protoplanetary disks with our model of X-ray irradiated disk atmospheres which was previously used to predict observable levels of the NeII and NeIII fine-structure transitions at 12.81 and 15.55mum. We extend the X-ray ionization theory to sulfur and calculate the fraction of sulfur in S, S+, S2+ and sulfur molecules. For the D'Alessio generic T Tauri star disk, we find that the SI fine-structure line at 25.55mum is below the detection level of the Spitzer Infrared Spectrometer (IRS), in large part due to X-ray ionization of atomic S at the top of the atmosphere and to its incorporation into molecules close to the mid-plane. We predict that observable fluxes of the SII 6718/6732AA forbidden transitions are produced in the upper atmosphere at somewhat shallower depths and smaller radii than the neon fine-structure lines. This and other forbidden line transitions, such as the OI 6300/6363AA and the CI 9826/9852AA lines, serve as complementary diagnostics of X-ray irradiated disk atmospheres. We have also analyzed the potential role of the low-excitation fine-structure lines of CI, CII, and OI, which should be observable by SOFIA and Herschel.Comment: Accepted by Ap

PAH emission from Herbig AeBe stars

We present spectra of a sample of Herbig Ae and Be (HAeBe) stars obtained with the Infrared Spectrograph on the Spitzer Space Telescope. All but one of the Herbig stars show emission from polycyclic aromatic hydrocarbons (PAHs) and seven of the spectra show PAH emission, but no silicate emission at 10 microns. The central wavelengths of the 6.2, 7.7--8.2, and 11.3 micron emission features decrease with stellar temperature, indicating that the PAHs are less photo-processed in cooler radiation fields. The apparent low level of photo processing in HAeBe stars, relative to other PAH emission sources, implies that the PAHs are newly exposed to the UV-optical radiation fields from their host stars. HAeBe stars show a variety of PAH emission intensities and ionization fractions, but a narrow range of PAH spectral classifications based on positions of major PAH feature centers. This may indicate that, regardless of their locations relative to the stars, the PAH molecules are altered by the same physical processes in the proto-planetary disks of intermediate-mass stars. Analysis of the mid-IR spectral energy distributions indicates that our sample likely includes both radially flared and more flattened/settled disk systems, but we do not see the expected correlation of overall PAH emission with disk geometry. We suggest that the strength of PAH emission from HAeBe stars may depend not only on the degree of radial flaring, but also on the abundance of PAHs in illuminated regions of the disks and possibly on the vertical structure of the inner disk as well.Comment: 52 pages, 12 figure

On the origin of [NeII] 12.81 micron emission from pre-main sequence stars: Disks, jets, and accretion

(Abridged) We have conducted a study of [NeII] line emission based on a sample of 92 pre-main sequence stars mostly belonging to the infrared Class II, including 13 accreting transition disk objects and 14 objects driving jets and outflows. We find several significant correlations between L[NeII] and stellar parameters, in particular LX and the wind mass loss rate, dM/dt. Most correlations are, however, strongly dominated by systematic scatter. While there is a positive correlation between L[NeII] and LX, the stellar mass accretion rate, dMacc/dt, induces a correlation only if we combine the largely different subsets of jet sources and stars without jets. Our results suggest that L[NeII] is bi-modally distributed, with separate distributions for the two subsamples. The jet sources show systematically higher L[NeII], by 1-2 orders of magnitude with respect to objects without jets. Jet-driving stars also tend to show higher mass accretion rates. We therefore hypothesize that the trend with dMacc/dt reflects a trend with dM/dt that is more physically relevant for [NeII] emission. L[NeII] measured for objects without known outflows and jets is found to agree with simplified calculations of [NeII] emission from disk surface layers if the measured stellar X-rays are responsible for heating and ionizing of the gas. The large scatter in L[NeII] may be introduced by variations of disk properties and the irradiation spectrum, as previously suggested. The systematically enhanced [NeII] flux from jet sources clearly suggests a role for the jets themselves, as previously demonstrated by a spatially resolved observation of the outflow system in the T Tau triple.Comment: accepted for Astronomy & Astrophysics, 25 pages, 11 figures - revisions: affiliation added, NeII flux unit in Table 3 correcte

The HCN-Water Ratio in the Planet Formation Region of Disks

We find a trend between the mid-infrared HCN/H$_{2}$O flux ratio and submillimeter disk mass among T Tauri stars in Taurus. While it may seem puzzling that the molecular emission properties of the inner disk ({lt}few AU) are related to the properties of the outer disk (beyond ~{}20 AU) probed by the submillimeter continuum, an interesting possible interpretation is that the trend is a result of planetesimal and protoplanet formation. Because objects this large are decoupled from the accretion flow, when they form, they can lock up water (and oxygen) beyond the snow line, thereby enhancing the C/O ratio in the inner disk and altering the molecular abundances there. We discuss the assumptions that underlie this interpretation, a possible alternative explanation, and related open questions that motivate future work. Whatever its origin, understanding the meaning of the relation between the HCN/H$_{2}$O ratio and disk mass is of interest as trends like this among T Tauri disk properties are relatively rare.Interstellar matter and star formationLaboratory astrophysics and astrochemistr