43 research outputs found
Publisher Correction: A PRDX1 mutant allele causes a MMACHC secondary epimutation in cblC patients
The original version of this Article contained an error in the title, which was incorrectly given as 'APRDX1 mutant allele causes a MMACHC secondary epimutation in cblC patients'. This has now been corrected in both the PDF and HTML versions of the Article to read 'A PRDX1 mutant allele causes a MMACHC secondary epimutation in cblC patients'
Paleodistributions and Comparative Molecular Phylogeography of Leafcutter Ants (Atta spp.) Provide New Insight into the Origins of Amazonian Diversity
The evolutionary basis for high species diversity in tropical regions of the world remains unresolved. Much research has focused on the biogeography of speciation in the Amazon Basin, which harbors the greatest diversity of terrestrial life. The leading hypotheses on allopatric diversification of Amazonian taxa are the Pleistocene refugia, marine incursion, and riverine barrier hypotheses. Recent advances in the fields of phylogeography and species-distribution modeling permit a modern re-evaluation of these hypotheses. Our approach combines comparative, molecular phylogeographic analyses using mitochondrial DNA sequence data with paleodistribution modeling of species ranges at the last glacial maximum (LGM) to test these hypotheses for three co-distributed species of leafcutter ants (Atta spp.). The cumulative results of all tests reject every prediction of the riverine barrier hypothesis, but are unable to reject several predictions of the Pleistocene refugia and marine incursion hypotheses. Coalescent dating analyses suggest that population structure formed recently (Pleistocene-Pliocene), but are unable to reject the possibility that Miocene events may be responsible for structuring populations in two of the three species examined. The available data therefore suggest that either marine incursions in the Miocene or climate changes during the Pleistocene—or both—have shaped the population structure of the three species examined. Our results also reconceptualize the traditional Pleistocene refugia hypothesis, and offer a novel framework for future research into the area
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Coastal Land Air Sea Interaction: “the” beach towers
2016 AGU Fall MeetingAs part of the Coastal Land Air Sea Interaction (CLASI) experiment, an alongshore array of 6-m high towers instrumented with ultrasonic 3D anemometers and temperature-relative humidity sensors were deployed at five sandy beaches near the high-tide line in Monterey Bay, CA, in May-June 2016. A cross-shore array of towers was also deployed from within the active surfzone to the toe of the dune at one beach. In addition, waves and ocean temperature were obtained along the 10m isobath for each beach. The dissipative surfzone was O(80m) wide. The wave energy varies among the beaches owing to sheltering and refraction by the Monterey Canyon and headlands. The tides are semi-diurnal mixed, meso-tidal with a maximum tidal range of 2m. This results in a variable beach width from the tower to the tidal line. Footprint analysis for estimating the source region for the turbulent momentum fluxes, suggests that the observations represent three scenarios described as primarily ocean, mixed beach and ocean, and primarily beach. The direct-estimate of the atmospheric stability by the sonic anemometer suggest that all of the beaches are mostly unstable except for a few occurrences in the evening during low wind conditions. The onshore neutral drag coefficient (Cd) estimated at 10m heights is 3-5 times larger than open ocean estimates. Minimal variability was found in Cd based on the footprint analysis. Beach- specific spatial variability in Cd was found related to atmospheric stability and wave energy
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New archaeal methyltransferases forming 1-methyladenosine or 1-methyladenosine and 1-methylguanosine at position 9 of tRNA.
Two archaeal tRNA methyltransferases belonging to the SPOUT superfamily and displaying unexpected activities are identified. These enzymes are orthologous to the yeast Trm10p methyltransferase, which catalyses the formation of 1-methylguanosine at position 9 of tRNA. In contrast, the Trm10p orthologue from the crenarchaeon Sulfolobus acidocaldarius forms 1-methyladenosine at the same position. Even more surprisingly, the Trm10p orthologue from the euryarchaeon Thermococcus kodakaraensis methylates the N(1)-atom of either adenosine or guanosine at position 9 in different tRNAs. This is to our knowledge the first example of a tRNA methyltransferase with a broadened nucleoside recognition capability. The evolution of tRNA methyltransferases methylating the N(1) atom of a purine residue is discussed.Journal ArticleResearch Support, Non-U.S. Gov'tSCOPUS: ar.jinfo:eu-repo/semantics/publishe