Population trends of waders on their boreal and arctic breeding grounds in northern Europe

Waders form a conspicuous part of the bird fauna in boreal and arctic areas, where they inhabit forests, wetlands, mires and tundra. These are important breeding areas for a large set of wader species, and may be particularly vulnerable to climate change. However, large-scale and systematic monitoring data from the breeding grounds of boreal and arctic waders are largely lacking. We present population trends for 22 wader species breeding in the boreal and arctic parts of Fennoscandia (Norway, Sweden and Finland) between 2006 and 2018. The trends are based on 9,713 surveys of 1,505 unique routes (6–8 km), each surveyed in at least two years, evenly distributed over an area of ~1 million km2. The trends were significantly negative for three species: Red-necked Phalarope Phalaropus lobatus (–7.9% year-1), Broad-billed Sandpiper Calidris falcinellus (–5.4% year-1), and Whimbrel Numenius phaeopus (–1.3% year-1). The trends were significantly positive for three species: Oystercatcher Haematopus ostralegus (+4.9% year-1), Dunlin Calidris a. alpina (+4.2% year-1) and Wood Sandpiper Tringa glareola (+0.8% year-1). For the remaining species, we found no statistically significant trends. On average, as shown by a multi-species indicator, there was no general change in numbers over time. On 1,539 routes with at least one survey, wader species richness as well as total number of wader pairs increased significantly with increasing latitude. Species population trend was not correlated with breeding latitude, but population trends of long-distance migrants tended to be more negative than those of medium-distance migrants. The recent fortunes of waders breeding in northern Fennoscandia have been more buoyant than those in other parts of Europe, but the trends for some species are worrying. © 2019, International Wader Study Group. All rights reserved.Peer reviewe

Inferring local adaptation from QST–FST comparisons: neutral genetic and quantitative trait variation in European populations of great snipe

We applied a phenotypic QST (PST) vs. FST approach to study spatial variation in selection among great snipe (Gallinago media) populations in two regions of northern Europe. Morphological divergence between regions was high despite low differentiation in selectively neutral genetic markers, whereas populations within regions showed very little neutral divergence and trait differentiation. QST > FST was robust against altering assumptions about the additive genetic proportions of variance components. The homogenizing effect of gene flow (or a short time available for neutral divergence) has apparently been effectively counterbalanced by differential natural selection, although one trait showed some evidence of being under uniform stabilizing selection. Neutral markers can hence be misleading for identifying evolutionary significant units, and adopting the PST–FST approach might therefore be valuable when common garden experiments is not an option. We discuss the statistical difficulties of documenting uniform selection as opposed to divergent selection, and the need for estimating measurement error. Instead of only comparing overall QST and FST values, we advocate the use of partial matrix permutation tests to analyse pairwise QST differences among populations, while statistically controlling for neutral differentiation.

Spatial pattern of MHC class II variation in the great snipe (Gallinago media)

The genes of the major histocompatibility complex (MHC) code for proteins involved in antigen recognition and triggering of the adaptive immune response, and are therefore likely to be under selection from parasites. These selection regimes may vary in space and time. Here we report a strong geographical structure in MHC class II B genes of a migrating bird, the great snipe (Gallinago media). Genetic differentiation in the MHC between two ecologically distinct distributional regions (Scandinavian mountain populations vs. East European lowland populations) was still present after statistically controlling for the effect of selectively neutral variation (microsatellites) using partial Mantel tests. This suggests a role for selection in generating this spatial structure and that it represents local adaptation to different environments. Differentiation between populations within the two regions was negligible. Overall, we found a high number of MHC alleles (50, from 175 individuals). This, together with a tendency for a higher rate of nonsynonymous than synonymous substitutions in the peptide binding sites, and high Tajima's D in certain regions of the gene, suggests a history of balancing selection. MHC variation is often thought to be maintained by some form of balancing selection, but the nature of this selection remains unclear. Our results support the hypothesis that spatial variation in selection regimes contributes to the high polymorphism.