243 research outputs found
Current distribution of the invasive earthworm Pontoscolex corethrurus (Müller, 1857) after a century of its first report from Kerala state, India
Pontoscolex corethrurus (Müller, 1857) is an important peregrine earthworm species in the humid tropics and is
found in land disturbed by human activities. Its presence in Kerala state was first reported by Michaelsen in 1910. So far the
occurrence of 14 exotic earthworm species has been reported from Kerala state. However present distribution status of any of
these exotic species is not yet thoroughly studied. Now P. corethrurus is naturalized in forests, degraded areas, and agroecosystems
from the higher altitude areas to the coastal zones. Here, the current distribution pattern of P. corethrurus in the
state after a period of 100 years is highlighted
Plasmacytoma of Bronchus Treated by Radical Radiotherapy-A Rare Case with Four and a Half Years Follow up
AbstractPlasmacytoma of the bronchus is a very rare plasma cell neoplasm affecting the bronchus. Here we report a case of plasmacytoma of the bronchus treated by radical radiotherapy in July 2002. The tumor responded very well to treatment and showed a slow but sustained regression in the size over two years. Presently, he has completed four and a half years of follow-up and is free of disease
Evaluation of total choline from in-vivo volume localized proton MR spectroscopy and its response to neoadjuvant chemotherapy in locally advanced breast cancer
Results of the proton magnetic resonance spectroscopy carried out on normal, benign breast disease and locally advanced breast cancer patients are presented. The in-vivo MR spectra of malignant breast tissue of patients (n = 67) suffering from infiltrating ductal carcinoma are dominated by the water resonance, while the spectra of the unaffected contralateral breast tissue of these patients are mainly dominated by resonance arising from lipids which is similar to the spectra of normal breast tissue obtained from volunteers (controls, n = 16). In addition to the water and lipid peaks, in majority of the patients (~80%) the water suppressed spectra showed a resonance at 3.2 ppm due to choline containing compounds (TCho) before treatment. In patients receiving neoadjuvant chemotherapy, absence/reduction in choline was observed in 89% of the patients. TCho was also observed in 2 of 14 benign lesions. The sensitivity and specificity of in-vivo MRS in detecting TCho in malignant tumours was 78% and 86%, respectively. Observation of TCho before treatment and its disappearance (or reduction) after treatment may be a useful indicator of response of locally advanced breast cancer to neoadjuvant chemotherapy. © 2001 Cancer Research Campaign http://www.bjcancer.co
Imaging using Tc99m-tetrofosmin for the detection of the recurrence of brain tumour: A comparative study with Tc99m-glucoheptonate
BACKGROUND: In the past "blood-brain barrier" agents such as
Tc99m-glucoheptonate were routinely used for the diagnosis of brain
tumours. Of late, agents used for studying myocardial perfusion namely,
Tc99m-tetrofosmin, Thallium-201, and Tc99m-sestamibi have replaced the
"blood-brain barrier agents" when imaging is undertaken for the
detection of the recurrence of brain tumours. However, the incremental
diagnostic information provided by Tc99m-tetrofosmin when compared with
a blood brain barrier agent in the diagnosis of recurrent brain tumour
has not been evaluated till date. AIMS: The study was carried out to
substantiate whether Tc99m-tetrofosmin provides any incremental
diagnostic information not provided by the blood brain barrier agent
Tc99m-glucoheptonate. MATERIAL AND METHODS: Brain SPECT scans were
performed using Tc99m-tetrofosmin and Tc99m-glucoheptonate in 126
patients of recurrent brain tumour. Bio-distribution and uptake
properties of both the tracers were analysed by measuring relative
uptake of both the tracers in tumour compared to background (T/B
ratio), nasopharynx (T/N ratio) and scalp (T/S ratio). STATISTICAL
ANALYSIS: Descriptive statistics were calculated for each variable.
Pearson's correlation coefficient was applied to see agreement of the
continuous variables. Paired t test was used to evaluate the difference
between two means. RESULTS: Uptake properties of both the tracers
were analysed in 105 patients in whom both Tc99m-tetrofosmin and
Tc99m-glucoheptonate showed concentration. The remaining 21 patients in
whom the tumour mass did not show Tc99m-tetrofosmin concentration were
excluded from the study. Mean T/B ratio, T/N ratio and T/S ratio was
5.83 \ub1 2.09 and 5.99 \ub1 2.26, 0.53 \ub1 0.21 and 0.55 \ub1
0.22 and 1.11 \ub1 0.60 and 1.26 \ub1 0.52 for Tc99m-tetrofosmin
and Tc99m-glucoheptonate respectively. No statistically significant
difference between T/B ratio and T/N ratio of Tc99m-tetrofosmin and
Tc99m-glucoheptonate was found; p values were 0.25 and 0.83
respectively. However there was significant difference (P=0.006)
between the T/S ratio of Tc99m-tetrofosmin and that of
Tc99m-glucoheptonate. CONCLUSION: Tc99m-tetrofosmin does not provide
any incremental diagnostic information not provided by the blood brain
barrier agent Tc99m-glucoheptonate
Current challenges in software solutions for mass spectrometry-based quantitative proteomics
This work was in part supported by the PRIME-XS project, grant agreement number 262067, funded by the European Union seventh Framework Programme; The Netherlands Proteomics Centre, embedded in The Netherlands Genomics Initiative; The Netherlands Bioinformatics Centre; and the Centre for Biomedical Genetics (to S.C., B.B. and A.J.R.H); by NIH grants NCRR RR001614 and RR019934 (to the UCSF Mass Spectrometry Facility, director: A.L. Burlingame, P.B.); and by grants from the MRC, CR-UK, BBSRC and Barts and the London Charity (to P.C.
A High-Temporal Resolution Technology for Dynamic Proteomic Analysis Based on 35S Labeling
As more and more research efforts have been attracted to dynamic or differential proteomics, a method with high temporal resolution and high throughput is required. In present study, a 35S in vivo Labeling Analysis for Dynamic Proteomics (SiLAD) was designed and tested by analyzing the dynamic proteome changes in the highly synchronized A549 cells, as well as in the rat liver 2/3 partial hepatectomy surgery. The results validated that SiLAD technique, in combination with 2-Dimensional Electrophoresis, provided a highly sensitivity method to illustrate the non-disturbed endogenous proteins dynamic changes with a good temporal resolution and high signal/noise ratio. A significant number of differential proteins can be discovered or re-categorized by this technique. Another unique feature of SiLAD is its capability of quantifying the rate of protein expression, which reflects the cellular physiological turn points more effectively. Finally, the prescribed SiLAD proteome snapshot pattern could be potentially used as an exclusive symbol for characterizing each stage in well regulated biological processes
Launching a Novel Preclinical Infrastructure: Comparative Oncology Trials Consortium Directed Therapeutic Targeting of TNFα to Cancer Vasculature
Background: Under the direction and sponsorship of the National Cancer Institute, we report on the first pre-clinical trial of the Comparative Oncology Trials Consortium (COTC). The COTC is a novel infrastructure to integrate cancers that naturally develop in pet dogs into the development path of new human drugs. Trials are designed to address questions challenging in conventional preclinical models and early phase human trials. Large animal spontaneous cancer models can be a valuable addition to successful studies of cancer biology and novel therapeutic drug, imaging and device development. Methodology/Principal Findings: Through this established infrastructure, the first trial of the COTC (COTC001) evaluated a targeted AAV-phage vector delivering tumor necrosis factor (RGD-A-TNF) to αV integrins on tumor endothelium. Trial progress and data was reviewed contemporaneously using a web-enabled electronic reporting system developed for the consortium. Dose-escalation in cohorts of 3 dogs (n = 24) determined an optimal safe dose (5 x 1012 transducing units intravenous) of RGD-A-TNF. This demonstrated selective targeting of tumor-associated vasculature and sparing of normal tissues assessed via serial biopsy of both tumor and normal tissue. Repetitive dosing in a cohort of 14 dogs, at the defined optimal dose, was well tolerated and led to objective tumor regression in two dogs (14%), stable disease in six (43%), and disease progression in six (43%) via Response Evaluation Criteria in Solid Tumors (RECIST). Conclusions/Significance: The first study of the COTC has demonstrated the utility and efficiency of the established infrastructure to inform the development of new cancer drugs within large animal naturally occurring cancer models. The preclinical evaluation of RGD-A-TNF within this network provided valuable and necessary data to complete the design of first-in-man studies
Proteomic Analysis of Aortae from Human Lipoprotein(a) Transgenic Mice Shows an Early Metabolic Response Independent of Atherosclerosis
Background: Elevated low density lipoprotein (LDL) and lipoprotein(a) are independent risk factors for the development of atherosclerosis. Using a proteomic approach we aimed to determine early changes in arterial protein expression in transgenic mice containing both human LDL and lipoprotein(a) in circulation. Methods and Results: Plasma lipid analyses showed the lipoprotein(a) transgenic mice had significantly higher lipid levels than wildtype, including a much increased LDL and high density lipoprotein (HDL) cholesterol. Analysis of aortae from lipoprotein(a) mice showed lipoprotein(a) accumulation but no lipid accumulation or foam cells, leaving the arteries essentially atherosclerosis free. Using two-dimensional gel electrophoresis and mass spectrometry, we identified 34 arterial proteins with significantly altered abundance (P,0.05) in lipoprotein(a) transgenic mice compared to wildtype including 17 that showed a $2 fold difference. Some proteins of interest showed a similarly altered abundance at the transcript level. These changes collectively indicated an initial metabolic response that included a down regulation in energy, redox and lipid metabolism proteins and changes in structural proteins at a stage when atherosclerosis had not yet developed. Conclusions: Our study shows that human LDL and lipoprotein(a) promote changes in the expression of a unique set o
A phase II study of sequential neoadjuvant gemcitabine plus doxorubicin followed by gemcitabine plus cisplatin in patients with operable breast cancer: prediction of response using molecular profiling
This study examined the pathological complete response (pCR) rate and safety of sequential gemcitabine-based combinations in breast cancer. We also examined gene expression profiles from tumour biopsies to identify biomarkers predictive of response. Indian women with large or locally advanced breast cancer received 4 cycles of gemcitabine 1200 mg m−2 plus doxorubicin 60 mg m−2 (Gem+Dox), then 4 cycles of gemcitabine 1000 mg m−2 plus cisplatin 70 mg m−2 (Gem+Cis), and surgery. Three alternate dosing sequences were used during cycle 1 to examine dynamic changes in molecular profiles. Of 65 women treated, 13 (24.5% of 53 patients with surgery) had a pCR and 22 (33.8%) had a complete clinical response. Patients administered Gem d1, 8 and Dox d2 in cycle 1 (20 of 65) reported more toxicities, with G3/4 neutropenic infection/febrile neutropenia (7 of 20) as the most common cycle-1 event. Four drug-related deaths occurred. In 46 of 65 patients, 10-fold cross validated supervised analyses identified gene expression patterns that predicted with ⩾73% accuracy (1) clinical complete response after eight cycles, (2) overall clinical complete response, and (3) pCR. This regimen shows strong activity. Patients receiving Gem d1, 8 and Dox d2 experienced unacceptable toxicity, whereas patients on other sequences had manageable safety profiles. Gene expression patterns may predict benefit from gemcitabine-containing neoadjuvant therapy
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