Supermassive Black-hole Demographics & Environments With Pulsar Timing Arrays

Precision timing of large arrays (>50) of millisecond pulsars will detect the nanohertz gravitational-wave emission from supermassive binary black holes within the next ~3-7 years. We review the scientific opportunities of these detections, the requirements for success, and the synergies with electromagnetic instruments operating in the 2020s.Comment: Submitted to the Astro2020 Decadal Survey. One of 5 core white-papers authored by members of the NANOGrav Collaboration. 9 pages, 2 figure

An empirically observed pitch-angle diffusion eigenmode in the Earth\u27s electron belt near L* = 5.0

Abstract Using data from NASA\u27s Van Allen Probes, we have identified a synchronized exponential decay of electron flux in the outer zone, near L* = 5.0. Exponential decays strongly indicate the presence of a pure eigenmode of a diffusion operator acting in the synchronized dimension(s). The decay has a time scale of about 4 days with no dependence on pitch angle. While flux at nearby energies and L* is also decaying exponentially, the decay time varies in those dimensions. This suggests the primary decay mechanism is elastic pitch angle scattering, which itself depends on energy and L *. We invert the shape of the observed eigenmode to obtain an approximate shape of the pitch angle diffusion coefficient and show excellent agreement with diffusion by plasmaspheric hiss. Our results suggest that empirically derived eigenmodes provide a powerful diagnostic of the dynamic processes behind exponential decays

Effect of directional pulling on mechanical protein degradation by ATP-dependent proteolytic machines

AAA+ proteases and remodeling machines couple hydrolysis of ATP to mechanical unfolding and translocation of proteins following recognition of sequence tags called degrons. Here, we use single-molecule optical trapping to determine the mechanochemistry of two AAA+ proteases, Escherichia coli ClpXP and ClpAP, as they unfold and translocate substrates containing multiple copies of the titin[superscript I27] domain during degradation initiated from the N terminus. Previous studies characterized degradation of related substrates with C-terminal degrons. We find that ClpXP and ClpAP unfold the wild-type titin I27 domain and a destabilized variant far more rapidly when pulling from the N terminus, whereas translocation speed is reduced only modestly in the N-to-C direction. These measurements establish the role of directionality in mechanical protein degradation, show that degron placement can change whether unfolding or translocation is rate limiting, and establish that one or a few power strokes are sufficient to unfold some protein domains. Keywords:protein degradation; AAA+ proteases; directional unfolding; AAA+ motorsNational Institutes of Health (U.S.) (Grant GM-101988)National Institutes of Health (U.S.) (Grant AI-15706

Formation of Uniaxial Molecular Films by Liquid-Crystal Imprinting in a Magnetic Field

Scanning tunneling microscopy was used to study molecular order in monolayer organic films formed by solution-phase growth from thermotropic liquid crystal solvents. The films develop macroscopically uniaxial alignment, with adlayer orientation controlled by an external magnetic field through interactions mediated by the liquid crystal. Results are presented for two films deposited from nematic and smectic- A solvents, along with a discussion of the alignment mechanism

Organic biogeochemistry in West Mata, NE Kau hydrothermal vent fields

Author Posting. © American Geophysical Union, 2021. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry, Geophysics, Geosystems 22(4), (2021): e2020GC009481, https://doi.org/10.1029/2020GC009481.The impact of submarine hydrothermal systems on organic carbon in the ocean—one of the largest fixed carbon reservoirs on Earth—could be profound. Yet, different vent sites show diverse fluid chemical compositions and the subsequent biological responses. Observations from various vent sites are to evaluate hydrothermal systems' impact on the ocean carbon cycle. A response cruise in May 2009 to an on-going submarine eruption at West Mata Volcano, northeast Lau Basin, provided an opportunity to quantify the organic matter production in a back-arc spreading hydrothermal system. Hydrothermal vent fluids contained elevated dissolved organic carbon, particulate organic carbon (POC), and particulate nitrogen (PN) relative to background seawater. The δ13C-POC values for suspended particles in the diffuse vent fluids (−15.5‰ and −12.3‰) are distinct from those in background seawater (−23 ± 1‰), indicative of unique carbon synthesis pathways of the vent microbes from the seawater counterparts. The first dissolved organic nitrogen concentrations reported for diffuse vents were similar to or higher than those for background seawater. Enhanced nitrogen fixation and denitrification removed 37%–89% of the total dissolved nitrogen in the recharging background seawater in the hydrothermal vent flow paths. The hydrothermal plume samples were enriched in POC and PN, indicating enhanced biological production. The total “dark” organic carbon production within the plume matches the thermodynamic prediction based on available reducing chemical substances supplied to the plume. This research combines the measured organic carbon contents with thermodynamic modeled results and demonstrates the importance of hydrothermal activities on the water column carbon production in the deep ocean.This project was supported by N.S.F. (OCE0929881, J. P. Cowen and K. H. Rubin), the NOAA PMEL VENTS (now Earth-Ocean Interactions) Program and the Joint Institute for the Study of the Atmosphere and Ocean (JISAO) under NOAA Cooperative Agreement No. NA10OAR4320148, and the UH NASA Astrobiology Institute. The Ministry of Science and Technology of Taiwan award (MOST 107-2611-M-002-002, and MOST 108-2611-M-002-006 to H.-T. Lin). Ministry of Education (M.O.E.) Republic of China (Taiwan) 109L892601 to H.-T. Lin. SOEST contributions no. 11285, C-DEBI contribution no. 563. PMEL contribution no. 3996, JISAO contribution 2183

Interplay between partner and ligand facilitates the folding and binding of an intrinsically disordered protein.

Protein-protein interactions are at the heart of regulatory and signaling processes in the cell. In many interactions, one or both proteins are disordered before association. However, this disorder in the unbound state does not prevent many of these proteins folding to a well-defined, ordered structure in the bound state. Here we examine a typical system, where a small disordered protein (PUMA, p53 upregulated modulator of apoptosis) folds to an α-helix when bound to a groove on the surface of a folded protein (MCL-1, induced myeloid leukemia cell differentiation protein). We follow the association of these proteins using rapid-mixing stopped flow, and examine how the kinetic behavior is perturbed by denaturant and carefully chosen mutations. We demonstrate the utility of methods developed for the study of monomeric protein folding, including β-Tanford values, Leffler α, Φ-value analysis, and coarse-grained simulations, and propose a self-consistent mechanism for binding. Folding of the disordered protein before binding does not appear to be required and few, if any, specific interactions are required to commit to association. The majority of PUMA folding occurs after the transition state, in the presence of MCL-1. We also examine the role of the side chains of folded MCL-1 that make up the binding groove and find that many favor equilibrium binding but, surprisingly, inhibit the association process.This is the final version. It was first published online by PNAS via http://dx.doi.org/10.1073/pnas.140912211

Defining “elite” status in sport: from chaos to clarity

The past two decades have seen a rapid rise in attention towards talent identification, athlete development and skill acquisition. However, there are important limitations to the evidentiary foundations of this field of research. For instance, variability in describing the performance levels of individuals has made it challenging to draw inferences about inter- and intrapopulation differences. More specifically, recent reviews on high performers in sport have noted considerable variation in how terms such as “elite” are used. This may be particularly concerning for researchers in high-performance disciplines, since they regularly struggle with small sample sizes and rely on research synthesis approaches (i.e. meta-analyses and systematic reviews) to inform evidence-based decisions. In this discussion piece, we (a) highlight issues with the application of current terminology, (b) discuss challenges in conceptualizing an improved framework and (c) provide several recommendations for researchers and practitioners working in this area

High-Resolution Surveys Along the Hot Spot–Affected Galapagos Spreading Center: 1. Distribution of Hydrothermal Activity

The spatial density of hydrothermal activity along most mid-ocean ridges is a robust linear function of spreading rate (or magmatic budget), but extreme crustal properties may alter this relationship. In 2005–2006 we tested the effect of thickened crust on hydrothermal activity using high-resolution mapping of plumes overlying the hot spot–affected Galapagos Spreading Center from 95o to 89o42\u27W (~560 km of ridge crest). Plume mapping discovered only two active, high-temperature vent fields, subsequently confirmed by camera tows, though strong plume evidence indicated minor venting from at least six other locations. Total plume incidence (ph), the fraction of ridge crest overlain by significant plumes, was 0.11 ± 0.014, about half that expected for a non–hot spot mid-ocean ridge with a similar magmatic budget. Plume distributions on the Galapagos Spreading Center were uncorrelated with abrupt variations in the depth of the along-axis melt lens, so these variations are apparently not controlled by hydrothermal cooling differences. We also found no statistical difference (for a significance level of 0.05) in plume incidence between where the seismically imaged melt lens is shallow (2 ± 0.56 km, ph = 0.108 ± 0.045) and where it is deep (3.4 ± 0.7 km, ph = 0.121 ± 0.015). The Galapagos Spreading Center thus joins mid-ocean ridges near the Iceland (Reykjanes Ridge), St. Paul-Amsterdam (South East Indian Ridge), and Ascension (Mid- Atlantic Ridge) hot spots as locations of anomalously scarce high-temperature venting. This scarcity implies that convective cooling along hot spot–affected ridge sections occurs primarily by undetected diffuse flow or is permanently or episodically reduced compared to normal mid-ocean ridges