Ethyl 2-[(carbamoyl­amino)­imino]­propano­ate hemihydrate

The title compound, C6H11N3O3·0.5H2O, has two independent mol­ecules and one mol­ecule of water in the asymmetric unit. The crystal packing is stabilized by inter­molecular N—H⋯N, O—H⋯O, N—H⋯O and C—H⋯O hydrogen bonds. These inter­actions form a two-dimensional array in the ab plane with a zigzag motif which has an angle close to 35° between the zigzag planes. The hydrogen bonding can be best described using the graph-set notation as N 1 = C(10)R 2 2(10)R 2 2(8) and N 2 = R 6 4(20)R 2 2(8)

An empirical evaluation of imputation accuracy for association statistics reveals increased type-I error rates in genome-wide associations

<p>Abstract</p> <p>Background</p> <p>Genome wide association studies (GWAS) are becoming the approach of choice to identify genetic determinants of complex phenotypes and common diseases. The astonishing amount of generated data and the use of distinct genotyping platforms with variable genomic coverage are still analytical challenges. Imputation algorithms combine directly genotyped markers information with haplotypic structure for the population of interest for the inference of a badly genotyped or missing marker and are considered a near zero cost approach to allow the comparison and combination of data generated in different studies. Several reports stated that imputed markers have an overall acceptable accuracy but no published report has performed a pair wise comparison of imputed and empiric association statistics of a complete set of GWAS markers.</p> <p>Results</p> <p>In this report we identified a total of 73 imputed markers that yielded a nominally statistically significant association at <it>P </it>< 10 ^-5for type 2 Diabetes Mellitus and compared them with results obtained based on empirical allelic frequencies. Interestingly, despite their overall high correlation, association statistics based on imputed frequencies were discordant in 35 of the 73 (47%) associated markers, considerably inflating the type I error rate of imputed markers. We comprehensively tested several quality thresholds, the haplotypic structure underlying imputed markers and the use of flanking markers as predictors of inaccurate association statistics derived from imputed markers.</p> <p>Conclusions</p> <p>Our results suggest that association statistics from imputed markers showing specific MAF (Minor Allele Frequencies) range, located in weak linkage disequilibrium blocks or strongly deviating from local patterns of association are prone to have inflated false positive association signals. The present study highlights the potential of imputation procedures and proposes simple procedures for selecting the best imputed markers for follow-up genotyping studies.</p

Ethyl 2-[(carbamothioyl­amino)­imino]­propano­ate

The title compound, C6H11N3O2S, consists of a roughly planar mol­ecule (r.m.s deviation from planarity = 0.077 Å for the non-H atoms) and has the S atom in an anti position to the imine N atom. This N atom is the acceptor of a strongly bent inter­nal N—H⋯N hydrogen bond donated by the amino group. In the crystal, mol­ecules are arranged in undulating layers parallel to (010). The mol­ecules are linked via inter­molecular amino–carboxyl N—H⋯O hydrogen bonds, forming chains parallel to [001]. The chains are cross-linked by Ncarbazone—H⋯S and C—H⋯S inter­actions, forming infinite sheets

Cleaner production for achieving the sustainable development goals

Cleaner production is a lively concept in which new procedures and technologies constantly emerge introducing methods and practices to prevent damages to the environment. A broad range of cleaner production initiatives contribute to sustainable development not only through the efficient management of resources and energy, but also through the development of new and smart technologies, new ways of assisting policies development, and organizing supply chains, sectors and individual companies. The authors of this Virtual Special Issue sought to introduce first-hand knowledge and discussions identifying and highlighting the ways cleaner production can contribute to reach the United Nations sustainable development targets. The intent of the Virtual Special Issue is to provide an overview of the recent trends that cleaner production practitioners/researchers are following in the chase of the sustainable development goals, and in this context, this editorial was designed to summarize and underscore the link between cleaner production concepts and practices and the sustainable development goals. An adequate response to this challenge required scientific knowledge and reassessment of the papers ensuring that the science is responsive to the evolving needs of sustainable development. This Virtual Special Issue of the Journal of Cleaner Production is mainly dedicated to the 7th International Workshop on Advances in Cleaner Production, held at Universidad de La Costa, Barranquilla, Colombia on 21–22 June 2018. Based upon the examination of the papers of this Virtual Special Issue, the authors were able to establish that there is an pressing need for research on the assessment on which/when cleaner production interventions are more effective; inter and multidisciplinary cooperation among social and technical scientists to distinguish and address the cleaner production/sustainable development goals interactions and connect cleaner production solutions and large-scale sustainability approaches

Chaos and Semiclassical Limit in Quantum Cosmology

In this paper we present a Friedmann-Robertson-Walker cosmological model conformally coupled to a massive scalar field where the WKB approximation fails to reproduce the exact solution to the Wheeler-DeWitt equation for large Universes. The breakdown of the WKB approximation follows the same pattern than in semiclassical physics of chaotic systems, and it is associated to the development of small scale structure in the wave function. This result puts in doubt the ``WKB interpretation'' of Quantum Cosmology.Comment: 14 pages in LaTex (RevTex), 6 figure

Optimal Resource Allocation with Delay Guarantees for Network Slicing in Disaggregated RAN

In this article, we propose a novel formulation for the resource allocation problem of a sliced and disaggregated Radio Access Network (RAN) and its transport network. Our proposal assures an end-to-end delay bound for the Ultra-Reliable and Low-Latency Communication (URLLC) use case while jointly considering the number of admitted users, the transmission rate allocation per slice, the functional split of RAN nodes and the routing paths in the transport network. We use deterministic network calculus theory to calculate delay along the transport network connecting disaggregated RANs deploying network functions at the Radio Unit (RU), Distributed Unit (DU), and Central Unit (CU) nodes. The maximum end-to-end delay is a constraint in the optimization-based formulation that aims to maximize Mobile Network Operator (MNO) profit, considering a cash flow analysis to model revenue and operational costs using data from one of the world's leading MNOs. The optimization model leverages a Flexible Functional Split (FFS) approach to provide a new degree of freedom to the resource allocation strategy. Simulation results reveal that, due to its non-linear nature, there is no trivial solution to the proposed optimization problem formulation. Our proposal guarantees a maximum delay for URLLC services while satisfying minimal bandwidth requirements for enhanced Mobile BroadBand (eMBB) services and maximizing the MNO's profit.Comment: 21 pages, 10 figures. For the associated GitHub repository, see https://github.com/LABORA-INF-UFG/paper-FGKCJ-202

Evaluation of antifungal activity and potential application as fluorescent probes of indolenine and benzo[e]indole-based squarylium dyes

The antifungal performance and the possible use as fluorescent probes of a series of squarylium dyes derived from indolenine and benzo[e]indole previously synthesized was evaluated. Some photophysical properties were performed in ethanol and phosphate buffer, and the type of aggregates form in phosphate buffer was analyzed. Using the 1,3-diphenylisobenzofuran assay, a qualitative assessment of the capacity of dyes to produce singlet oxygen after irradiation was performed. Regarding the antifungal activity, this was studied through a broth microdilution assay using Saccharomyces cerevisiae PYCC 4072 as a biological model. The effect of irradiation of the dyes, with an appropriate light emitting diode system, on the antifungal activity was also evaluated, and it was verified that some of the dyes improve their activity after irradiation. Using fluorescence microscopy techniques, the colocalization of dyes in S. cerevisae cells was investigated and it was possible to verify that some of the squarylium dyes with a barbituric moiety in the four-membered central ring stained and accumulated preferentially in the mitochondrial web and perinuclear membrane of the cells. The possible use as a fluorescent probe for the detection of HSA was also evaluated for one of the dyes of the series, demonstrating a linear variation of the fluorescence intensity accompanied by the increase of the protein concentration.We thank to Fundação para a Ciência e Tecnologia (FCT), Comissão de Coordenação e Desenvolvimento Regional do Norte (CCDR-N) and FEDER (European Fund for Regional Development)-COMPETEQREN-EU for financial support to the research centers CQ/UM (UIDB/00686/2020), CBMA (UID/BIA/04050/2020), CQ/VR (UID/QUI/UI0616/2019) and CICSUBI (POCI-01-0145-FEDER-007491), as well as PhD grants to V.S.D.G. (UMINHO/BD/43/2016) and J.C.C.F. (SFRH/BD/133207/2017)

The striped soldier shrimp Plesionika edwardsii (Crustacea:Decapoda:Pandalidae) from the cape Verde Islands

This study is part of the PROACTIVA 1-2 (2009-2012) and MARPROF-CV (2010-2014) projects, in the framework of the Canary Islands Government and UE PCT MAC 2007-2013 programmes respectively. Research has mainly focused on the stock assessment of the striped soldier shrimp, Plesionika edwardsii (Brandt, 1851), because it has shown moderate to high levels of fishing yield and abundances compatible with the development of a new sustainable fishery in the Cape Verde Islands. Cruises took place on board the R/V Prof. Ignacio Lozano. Four 15-day surveys have been conducted to date: Cabo Verde 2010-04 (April 2010), Camar˜ao-1 (November 2011), Camar˜ao-2 (Mars 2012) and Camar ˜ao-3 (July 2012). An innovative fishing gear so-called multiple semi-floating shrimp trap (MSFST) was used. Each fishing line was composed by 40-65 traps operating around 2.4 m above the seafloor, using Decapterus macarellus (Carangidae) as unique bait of the traps. Fishing depth was 66-458 m, and efective fishing time was 16-18 h. Each trap was attached to the main bottom line every 15 m, and the maximum attraction of this bait was established to be 100 or 150 m, according to the experience gained from the local fishery for deep-sea lobsters. So density by area was calculated assuming two different areas of attraction of the fishing gear. Initial biomass was estimated from depletion experiments at different abundance stations by applying the Leslie & Davis (1939) method, modified by Ricker (1975). Each fishing operation was classified according to its yield (CPUE in g/trap/night). The potential fishing planar area was estimated between the isobathymetric lines between 90 and 220 m. Total biomasses (Bt) were calculated from areas (km2) and mean minimum/maximum densities (kg/km2). Maximum sustainable yield (MSY) was estimated from Bt using the Beddington and Cooke (1983) model by entering natural mortality (0.6), growth rate (0.53 year�1) and recruitment age (1.32 year), which are the parameters for this target species published for the Canaries. These parameters estimate a biological exploitation rate ( ) of 0.262. Interpolations were applied to estimate MSY for insular stocks representing lesser than 5% of the total fishing grounds for this species in the archipelago. The MSY estimated by depletion were 30.5 tons/year for the stock of S˜ao Vicente, Santa Luzia, Ilheus and S˜ao Nicolau, 10 tons/year for the stock of Santiago, 138.8 tons/year for the stock of Boa Vista and Maio, and 5.6 tons/year for the stock of Sal. The small stocks estimated by interpolation were: 4.5 tons/year for the stock of Santo Ant˜ao, 1.3 tons/year for the stock of Fogo, and 1.8 tons/year for the stock of Brava and Ilheus. In total, 192.5 tons per year was the total MSY for the striped soldier shrimp around the islands of the Cape Verde archipelago, occupying a total area of 1,918 km2 of new fishing grounds at between 90 and 220 m of depth. In comparison with the traditional bottom trap used in the Canary Islands, the innovative fishing gear MSFST were proved to be more selective for pandalid shrimps, minimizing the gear impact on the seafloor as well as the by-catch by reducing the discards. Depletion methods are based on the assumption of a closed system, that is with minimum or zero immigration between neighbouring areas. The straight forward decline of CPUEs obtained during the depletion experiments seems to confirm that P. edwardsii is a low mobility species, making this assumption valid at least during short-time periods. Because of the bathymetry profile of these islands,the depth range is from very close (few nautical miles in Santiago) to far away (10-12 n.m. in Boa Vista) to the coastline. Fishing effort should be controlled on the basis of quotas, number of fishing vessels and a precautionary approach in order to ensure that catching is commensurate with sustainable levels of exploitation. MSY estimates suggest that this new Capeverdean fishery should be carried out by specialized medium-sized fishing vessels. During the last decades a combination of shrimp trawling and industrial trapping activity has threatened over-exploitation in the Mediterranean fisheries targeting on P. edwardsii; currently the shrimp collapse has conducted to the decline of these fisheries. Can the Cape Verde regulatory bodies and all the stakeholders involved learn the lessons this teaches us about this resource management

By-catch composition of the striped soldier shrimp Plesionika edwardsii (Crustace: Decapoda: Pandalidae) experimental fishery in the Cape Verde Islands

This work focuses on the by-catch composition of Plesionika edwardsii experimental fishery in the Cape Verde Islands. Obtaining information on abundance, composition and lifecycle of species involved in this potential fishery is useful, in order to ensure its sustainable development under an ecosystem approach. The first step towards this goal is the description of catches. Four 15-day research surveys were conducted on board the R/V Prof. Ignacio Lozano: April 2010 (S˜ao Vicente and Santa Luzia islands), November 2011 (Santiago island), March 2012 (Boa Vista island,) and July 2012 (Sal and S˜ao Nicolau islands). The working depths were between 66 and 458 m depth. A standardized innovative fishing gear was used, so-called multiple semi-floating shrimp traps. Each fishing line was composed by 40-65 traps operating around 2.4 m above the seafloor, using Decapterus macarellus (Carangidae) as unique bait of the traps. Multiple semi-floating shrimp traps is a passive fishing system that allows catch and release sea significant part of the unwanted catches, as in the case of Chondrichthyes or Anguilliformes, reducing the fishing impact on non-target species. The main by-catch was composed of 53 species belonging to three groups including Chondrichthyes (three families and three species), Crustacea (11 families and 19 species) and Osteichthyes (15 families and 29 species). Plesionika edwardsii, the target species of this fishery, represented 97.8% of the catch in terms of abundance and 40.1% in biomass. By-catch represented 59.9% of total catch in terms of biomass. Osteichthyes (87.5%) were the dominant group and was represented by the following main families; Sparidae (33.9%), Moridae (32.5%), Muraenidae (32.5%), Scorpaenidae (9.9%) and Tetraodontidae (9.8%). Chondrichthyes (11.6%) were composed by Centrophoridae (65.3%) and Triakidae (34.1%). Finally, Crustacea (1.9%) were chiefly composed by Pandalidae (79.1%). However, different families represented by specific species were found to be dominant around each island. Sparidae were the dominant family represented by Pagellus acarne (46.2% of total by-catch) at S˜ao Vicente, and by Dentex macrophthalmus (42.6%) at Boa Vista. Tetraodontidae with Sphoeroides pachygaster (25.9%) and Sparidae with P. acarne (25.1%) were the co-dominant families in the by-catch around Santa Luzia. Muraenidae were the dominant family represented by Gymnothorax polygonius (69.4%) at Sal, and by Muraena helena (63.4%) at S˜ao Nicolau. Finally, Scorpaenidae with Pontinus kuhlii (22.3%) and Moridae with Physiculus cyanostrophus (22.1%) were the co-dominant families of the bycatch around Santiago. Acknowledgements: This study is part of the PROACTIVA 1-2 (2009-2012) and MARPROF-CV (2010-2014) projects, in the framework of the Canary Islands Government and UE PCT MAC 2007- 2013 programmes respectively

Dectin-1 Activation Exacerbates Obesity and Insulin Resistance in the Absence of MyD88

This work was supported by Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP, grant numbers 11/15682-4, 12/02270-2, 15/18121-4), Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq, Regenera INCT Process Grant 465656/2014-5). JL is funded by the NIH/NIDDK R01DK106210. GDB is funded by the Wellcome Trust and the MRC Centre for Medical Mycology. Open access journalPeer reviewedPublisher PD