3,050 research outputs found

    High-Resolution Images of Diffuse Neutral Clouds in the Milky Way. I. Observations, Imaging, and Basic Cloud Properties

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    A set of diffuse interstellar clouds in the inner Galaxy within a few hundred pc of the Galactic plane has been observed at an angular resolution of ~1 arcmin combining data from the NRAO Green Bank Telescope and the Very Large Array. At the distance of the clouds the linear resolution ranges from ~1.9 pc to ~2.8 pc. These clouds have been selected to be somewhat out of the Galactic plane and are thus not confused with unrelated emission, but in other respects they are a Galactic population. They are located near the tangent points in the inner Galaxy, and thus at a quantifiable distance: 2.3R6.02.3 \leq R \leq 6.0 kpc from the Galactic Center, and 1000z+610-1000 \leq z \leq +610 pc from the Galactic plane. These are the first images of the diffuse neutral HI clouds that may constitute a considerable fraction of the ISM. Peak HI column densities range from NHI=0.82.9×1020N_{HI} = 0.8-2.9 \times 10^{20} cm2^{-2}. Cloud diameters vary between about 10 and 100 pc, and their HI mass spans the range from less than a hundred to a few thousands Msun. The clouds show no morphological consistency of any kind except that their shapes are highly irregular. One cloud may lie within the hot wind from the nucleus of the Galaxy, and some clouds show evidence of two distinct thermal phases as would be expected from equilibrium models of the interstellar medium.Comment: 81 pages, 42 figures, accepted for publication in the Astrophysical Journal Supplement Serie

    Mapping small molecule binding data to structural domains.

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    RIGHTS : This article is licensed under the BioMed Central licence at http://www.biomedcentral.com/about/license which is similar to the 'Creative Commons Attribution Licence'. In brief you may : copy, distribute, and display the work; make derivative works; or make commercial use of the work - under the following conditions: the original author must be given credit; for any reuse or distribution, it must be made clear to others what the license terms of this work are.BACKGROUND: Large-scale bioactivity/SAR Open Data has recently become available, and this has allowed new analyses and approaches to be developed to help address the productivity and translational gaps of current drug discovery. One of the current limitations of these data is the relative sparsity of reported interactions per protein target, and complexities in establishing clear relationships between bioactivity and targets using bioinformatics tools. We detail in this paper the indexing of targets by the structural domains that bind (or are likely to bind) the ligand within a full-length protein. Specifically, we present a simple heuristic to map small molecule binding to Pfam domains. This profiling can be applied to all proteins within a genome to give some indications of the potential pharmacological modulation and regulation of all proteins. RESULTS: In this implementation of our heuristic, ligand binding to protein targets from the ChEMBL database was mapped to structural domains as defined by profiles contained within the Pfam-A database. Our mapping suggests that the majority of assay targets within the current version of the ChEMBL database bind ligands through a small number of highly prevalent domains, and conversely the majority of Pfam domains sampled by our data play no currently established role in ligand binding. Validation studies, carried out firstly against Uniprot entries with expert binding-site annotation and secondly against entries in the wwPDB repository of crystallographic protein structures, demonstrate that our simple heuristic maps ligand binding to the correct domain in about 90 percent of all assessed cases. Using the mappings obtained with our heuristic, we have assembled ligand sets associated with each Pfam domain. CONCLUSIONS: Small molecule binding has been mapped to Pfam-A domains of protein targets in the ChEMBL bioactivity database. The result of this mapping is an enriched annotation of small molecule bioactivity data and a grouping of activity classes following the Pfam-A specifications of protein domains. This is valuable for data-focused approaches in drug discovery, for example when extrapolating potential targets of a small molecule with known activity against one or few targets, or in the assessment of a potential target for drug discovery or screening studies

    Singularity analysis: a tool for extracting lithologic and stratigraphic content from seismic data

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    In this work, we test an amplitude-independent method of seisimic data analysis designed to extract lithologic information about stratigraphic horizons. We apply the method of singularity characterization in an attempt to determine the sharpness of lithologic boundaries. We infer the sharpness of the boundary based upon a fractional integration of the seismic trace. The order of fractional integration is taken to represent the abruptness of the lithologic transition responsible for a given reflector. We find that the method output behaves in a geologically reasonable manner which suggests that our method is responding to lithologic variations along boundaries responsible for prominent reflectors in the data

    Prevalence of reproductive tract infections among ever married women of age 18 to 49 years in a rural area of Cuddalore district, Tamil Nadu

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    Background: Reproductive tract infections (RTIs) affect not only women’s health but also has its implications on child health, family and socioeconomic development of the community. Unless the symptoms become alarming, women with RTI don’t seek health care. If untreated or inadequately treated RTI can lead to complications causing morbidity and mortality. So, this study focused to find out the prevalence of RTI among ever married women and its association between RTI and sociodemographic variables in a rural area.Methods: This community based cross sectional study was conducted from September 2021 to March 2022 among ever married women of 18 to 49 years in a rural area, Parangipettai, Cuddalore district, Tamil Nadu. A total of 320 women were interviewed by a house-to-house survey. Structured pretested questionnaire was used to collect data on symptoms of RTI, sociodemographic and obstetric variables.Results: Out of 320 study participants, the prevalence of RTI was found to be 23.8% (n=76). The most common symptoms reported was vaginal discharge 14.37% followed by lower abdominal pain 13.75%. This study showed that RTI was significantly associated with age of women (p=0.006) and previous history of abortion (p=0.023).Conclusions: In spite of various health programs in place, the prevalence of RTI was as high as 23.8% in this study. This implies sensitizing rural women about RTI at regular intervals is necessary for reducing the burden and preventing the complications of RTI.

    COMPARATIVE ANALYSIS OF EFFICACY AND SAFETY OF DIACEREIN VERSUS S-ADENOSYL METHIONINE IN THE MANAGEMENT OF OSTEOARTHRITIS OF KNEE JOINT

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    Objective: Osteoarthritis (OA) the most common type of arthritis is a degenerative joint disease primarily affecting the articular cartilage and its surrounding tissue. Drugs like Diacerein and S-adenosyl methionine (SAMe) are used to remodel the cartilage and slow the progression of the disease, by acting through different mechanisms. Though there is documented evidence of the efficacy of both agents used individually in several clinical trials only a few studies report a comparison. To analyse the efficacy and safety of Diacerein Versus S-adenosyl methionine in the treatment of Osteoarthritis of knee joint.Methods: A prospective randomised interventional study was planned comparing diacerein with SAMe for 12 w in the management of OA of the knee. 40 patients in each group were randomly assigned to receive either diacerein 50 mg twice daily or S-adenosyl methionine 200 mg thrice daily for 12 w. Both groups received a short course of diclofenac 50 mg bd for one week, to tide over the acute symptoms.Results: Assessment of both drugs individually showed an equieffective potential in reducing osteoarthritis pain over a period of 12 w. But the comparison between the two groups showed a marginal improvement in pain relief from the 4th to 12th week of assessment in the diacerein group.Conclusion: Both the drugs for the treatment of OA, were shown to be effective in relieving pain but with a slower onset of action. Since no radiological changes were observed during the 12-week protocol, studies of longer duration are needed to evaluate the long-term effectiveness of these drugs

    Varying Carbon Dioxide Levels and its Effects on Malsoma laurina’s Photosynthetic Rate

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    The Keeling Curve has displayed an exponential increase in carbon dioxide within the earth’s atmosphere since the late 1950’s. Scientists have heatedly debated the effects that will occur as a result of this relatively new phenomenon (since the Industrial Revolution of America). We tested the effect of increased carbon dioxide levels on plant life, Malosma laurina, in particular. Our experiment involved the application of 400 PPM of carbon dioxide into different specimens of M. laurina and 800 PPM of carbon dioxide into the same specimens. We then recorded the rate of photosynthesis, conductance results, and levels of internal carbon dioxide. Results displayed that plants experience a higher rate of photosynthesis when they are exposed to higher levels of carbon dioxide. This information is vital to the scientific community because both scientists and botanists can utilize this information to produce plants more efficiently

    Characterization of Defects and Designed Flaws in Metal Additive Manufacturing (AM) Parts with X-ray Computed Tomography (XCT)

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    Metal Additive Manufacturing (AM) has great potential to revolutionize manufacturing industries, but a reliable method to detect defects in AM-produced parts with complex internal structures must be developed prior to its widespread adoption. In this research, defects occurring in additively manufactured metal parts are characterized with X-ray Computed Tomography (XCT). In addition, the concept of metrological XCT is introduced, with the goal of providing more accurate dimensional measurements of the internal features. Preliminary experiments have been conducted toward the larger goal of evaluating XCT as a viable option for nondestructive evaluation of AM-produced components. Critical to this evaluation is the principle of the Probability of Detection (PoD), which has not been previously determined for typical AM defects using XCT. The first step in determining the PoD for XCT is to develop a suitable artifact with embedded features that are representative of the defects occurring in AM-produced parts. Two sets of samples were built by AM and their embedded defects measured by XCT. In the first set of samples, the chosen AM processing parameters were suboptimal, ensuring that defects would be present in the parts. These parameters were also varied to understand their effect on the resulting microstructure and defect formation. Measurements of porosity and the pore size distribution were determined from the XCT images. In the second set of samples, synthetic internal features were added, some approximating typical AM defects. Dimensional XCT was used to evaluate the quality of these features. Based on the results, a future experiment with the goal of estimating the PoD of critical AM defects with an XCT system is suggested

    Carrier-envelope phase stability of hollow-fibers used for high-energy, few-cycle pulse generation

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    We investigated the carrier-envelope phase (CEP) stability of a hollow-fiber setup used for high-energy, few-cycle pulse generation. Saturation of the output pulse energy is observed at 0.6 mJ for a 260 um inner-diameter, 1 m long fiber, statically filled with neon, with the pressure adjusted to achieve an output spectrum capable of supporting sub-4fs pulses. The maximum output pulse energy can be increased to 0.8mJ by using either differential pumping, or circularly polarized input pulses. We observe the onset of an ionization-induced CEP instability, which does not increase beyond an input pulse energy of 1.25 mJ due to losses in the fiber caused by ionization. There is no significant difference in the CEP stability with differential pumping compared to static-fill, demonstrating that gas flow in differentially pumped fibers does not degrade the CEP stabilization.Comment: 4 pages, 4 figure

    Invariant Natural Killer T-Cell Control of Type 1 Diabetes: A Dendritic Cell Genetic Decision of a Silver Bullet or Russian Roulette

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    OBJECTIVE: In part, activation of invariant natural killer T (iNKT)-cells with the superagonist alpha-galactosylceramide (alpha-GalCer) inhibits the development of T-cell-mediated autoimmune type 1 diabetes in NOD mice by inducing the downstream differentiation of antigen-presenting dendritic cells (DCs) to an immunotolerogenic state. However, in other systems iNKT-cell activation has an adjuvant-like effect that enhances rather than suppresses various immunological responses. Thus, we tested whether in some circumstances genetic variation would enable activated iNKT-cells to support rather than inhibit type 1 diabetes development. RESEARCH DESIGN AND METHODS: We tested whether iNKT-conditioned DCs in NOD mice and a major histocompatibility complex-matched C57BL/6 (B6) background congenic stock differed in capacity to inhibit type 1 diabetes induced by the adoptive transfer of pathogenic AI4 CD8 T-cells. RESULTS: Unlike those of NOD origin, iNKT-conditioned DCs in the B6 background stock matured to a state that actually supported rather than inhibited AI4 T-cell-induced type 1 diabetes. The induction of a differing activity pattern of T-cell costimulatory molecules varying in capacity to override programmed death-ligand-1 inhibitory effects contributes to the respective ability of iNKT-conditioned DCs in NOD and B6 background mice to inhibit or support type 1 diabetes development. Genetic differences inherent to both iNKT-cells and DCs contribute to their varying interactions in NOD and B6.H2(g7) mice. CONCLUSIONS: This great variability in the interactions between iNKT-cells and DCs in two inbred mouse strains should raise a cautionary note about considering manipulation of this axis as a potential type 1 diabetes prevention therapy in genetically heterogeneous humans
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