Phase transition effects: A crystallographic characterization of the temperature dependency of the crystal structure of the 1:1 charge transfer complex between anthracene and tetracyanobenzene in the temperature range 297 to 119 K

Crystal structures of the charge transfer complex between anthracene and tetracyanobenzene, A:TCNB, C14H10: C10H2N4, at three temperatures (297, 234 and 226 K) above the order–disorder phase transition at 206 K and at four temperatures (202, 170, 138, and 119 K) below it have been determined from x-ray diffraction data. The space group of the room temperature phase was assigned as Cm with a = 9.528(2), b =12.779(3), c = 7.441(2) Å and β=92.39(2) degrees at 297 K and for the low temperature phase is P21/a with a =9.457(1), b =12.689(2), c =7.325(1) Å and β=92.98(1)° at 119 K; Z = 2 in both phases. The electron densities, plotted for both the donor and acceptor molecules at each temperature, indicate that there is dynamic librational disorder in the A molecules that gives rise to a single average orientation in the room temperature phase. Below the phase transition, two temperature dependent, symmetry related, orientations are observed; the libration diminishes slowly as a function of temperature in this phase. There are also modest reorientations, relative to the room temperature phase, in the TCNB molecules as the crystal is cooled. Crystal packing indicates that a network of intermolecular dipole–dipole interactions between the heteroatomic acceptor molecules accounts for their lack of libration comparable to that of the donors

Phase transition effects: A crystallographic characterization of the temperature dependency of the crystal structure of the 1:1 charge transfer complex between anthracene and tetracyanobenzene in the temperature range 297 to 119 K

Crystal structures of the charge transfer complex between anthracene and tetracyanobenzene, A:TCNB, C14H10: C10H2N4, at three temperatures (297, 234 and 226 K) above the order–disorder phase transition at 206 K and at four temperatures (202, 170, 138, and 119 K) below it have been determined from x-ray diffraction data. The space group of the room temperature phase was assigned as Cm with a = 9.528(2), b =12.779(3), c = 7.441(2) Å and β=92.39(2) degrees at 297 K and for the low temperature phase is P21/a with a =9.457(1), b =12.689(2), c =7.325(1) Å and β=92.98(1)° at 119 K; Z = 2 in both phases. The electron densities, plotted for both the donor and acceptor molecules at each temperature, indicate that there is dynamic librational disorder in the A molecules that gives rise to a single average orientation in the room temperature phase. Below the phase transition, two temperature dependent, symmetry related, orientations are observed; the libration diminishes slowly as a function of temperature in this phase. There are also modest reorientations, relative to the room temperature phase, in the TCNB molecules as the crystal is cooled. Crystal packing indicates that a network of intermolecular dipole–dipole interactions between the heteroatomic acceptor molecules accounts for their lack of libration comparable to that of the donors

X-ray structure of the quinoprotein ethanol dehydrogenase from \u3ci\u3ePseudomonas aeruginosa\u3c/i\u3e: basis of substrate specificity

The homodimeric enzyme form of quinoprotein ethanol dehydrogenase from Pseudomonas aeruginosa ATCC 17933 crystallizes readily with the space group R3. The X-ray structure was solved at 2.6 Å resolution by molecular replacement. Aside from differences in some loops, the folding of the enzyme is very similar to the large subunit of the quinoprotein methanol dehydrogenases from Methylobacterium extorquens or Methylophilus W3A1. Eight W-shaped β-sheet motifs are arranged circularly in a propeller-like fashion forming a disk-shaped superbarrel. No electron density for a small subunit like that in methanol dehydrogenase could be found. The prosthetic group is located in the centre of the superbarrel and is coordinated to a calcium ion. Most amino acid residues found in close contact with the prosthetic group pyrroloquinoline quinone and the Ca2+ are conserved between the quinoprotein ethanol dehydrogenase structure and that of the methanol dehydrogenases. The main differences in the active-site region are a bulky tryptophan residue in the active-site cavity of methanol dehydrogenase, which is replaced by a phenylalanine and a leucine side-chain in the ethanol dehydrogenase structure and a leucine residue right above the pyrrolquinoline quinone group in methanol dehydrogenase which is replaced by a tryptophan side-chain. Both amino acid exchanges appear to have an important influence, causing different substrate specificities of these otherwise very similar enzymes. In addition to the Ca2+ in the active-site cavity found also in methanol dehydrogenase, ethanol dehydrogenase contains a second Ca2+-binding site at the N terminus, which contributes to the stability of the native enzyme

Preliminary X-ray diffraction studies of the transcriptional inhibitory antibody Fab41.4

The binding of transcription factor ATF-1 to DNA contributes to gene expression and regulation of cell growth. Antibody Mab41.4, raised against ATF-1, and its derivatives Fab41.4 and scFv41.4 inhibit specific DNA binding in vitro and induce apoptotic death of tumor cells in vivo. Structural studies of Fab41.4 were performed to gain insight into the mechanism of action of this potentially therapeutic antibody. The optimal conditions for crystallization of Fab41.4 were determined. Crystals were needle-like in appearance, displayed C2 space-group symmetry and diffracted to a resolution of 1.6 Å. The unit-cell parameters were determined to be a = 186.64, b = 40.22, c = 55.58 Å, α = γ = 90, β = 96.93°. The data set was 97.7% complete. Molecular replacement was performed, resulting in an R value of 44.6%

Preliminary X-ray diffraction studies of the transcriptional inhibitory antibody Fab41.4

The binding of transcription factor ATF-1 to DNA contributes to gene expression and regulation of cell growth. Antibody Mab41.4, raised against ATF-1, and its derivatives Fab41.4 and scFv41.4 inhibit specific DNA binding in vitro and induce apoptotic death of tumor cells in vivo. Structural studies of Fab41.4 were performed to gain insight into the mechanism of action of this potentially therapeutic antibody. The optimal conditions for crystallization of Fab41.4 were determined. Crystals were needle-like in appearance, displayed C2 space-group symmetry and diffracted to a resolution of 1.6 Å. The unit-cell parameters were determined to be a = 186.64, b = 40.22, c = 55.58 Å, α = γ = 90, β = 96.93°. The data set was 97.7% complete. Molecular replacement was performed, resulting in an R value of 44.6%

Synthesis, structure, and spectral behavior of donor acceptor substituted biphenyls

Reaction of the activated halonitrobenzenes 2a-f with the bis- and tris(dialkylamino)benzenes 1a-e affords, via a direct nucleophilic substitution, the highly substituted biphenyls 3a-o; the lesser substituted biphenyls 5 and 6 were prepared by an Ullmann reaction. All these biphenyls are deeply colored; the dark red color can be assigned to an intramolecular charge transfer. A crystal structure determination was carried out for 2,4,6-tripyrrolidino-2',4',6'-trinitrobiphenyl (3a): space group C2/c, a = 16.071 (2) A, b = 14.545 (1) A, c = 20.177 (2) A, {3 = 91.361 (9)°, Z = 8 (temperature ≈ 120 K). The dihedral angle between the two arene rings was found to be only 52.5°, despite the four bulky substituents in the o,o'-positions. With this far-from-orthogonal torsional angle about the biphenyl linkage, the strong intramolecular charge transfer from the π system of the donor into the π system of the acceptor arene becomes easily understandable. A PPP calculation with the torsional angles taken from the X-ray structure analysis satisfactorily reproduces the experimental absorption spectrum of 3a. The shift of the long-wavelength absorption between the individual biphenyls 3a-o, 5, and 6 likewise is accounted for satisfactorily by the calculation; it depends primarily on the intrinsic donor strength of the different NR2 moieties (pyrrolidino > dimethylamino > piperidino > morpholino). The IH NMR spectra (in dilute solution) likewise mirror this gradation in Nr2 donor capacity; they also show that steric hindrance at the biphenyl linkage is mainly the result of interaction between the o-dialkylamino groups and the C6 skeleton of the acceptor arene. This is borne out by the crystal structure analysis

Shape evolution in the neutron-rich osmium isotopes:Prompt γ-ray spectroscopy of Os 196

The shape transition in the neutron-rich Os isotopes is studied by investigating the neutron-rich 196Os nucleus through in-beam γ-ray spectroscopy using a two-proton transfer reaction from a 198Pt target to a 82Se beam. The beam-like recoils were detected and identified with the large-acceptance magnetic spectrometer PRISMA, and the coincident γ rays were measured with the advanced gamma tracking array (AGATA) demonstrator. The de-excitation of the low-lying levels of the yrast-band of 196Os were identified for the first time. The results are compared with state-of-the-art beyond-mean-field calculations, performed for the even-even 188-198Os isotopes. The new results suggest a smooth transition in the Os isotopes from a more axial rotational behavior towards predominately vibrational nuclei through triaxial configurations. An almost perfect γ-unstable/triaxial rotor yrast band is predicted for 196Os which is in agreement with the experimentally measured excited state