Molecular Characterization of Copper and Cadmium Resistance Determinants in the Biomining Thermoacidophilic Archaeon Sulfolobus metallicus

Sulfolobus metallicus is a thermoacidophilic crenarchaeon used in high-temperature bioleaching processes that is able to grow under stressing conditions such as high concentrations of heavy metals. Nevertheless, the genetic and biochemical mechanisms responsible for heavy metal resistance in S. metallicus remain uncharacterized. Proteomic analysis of S. metallicus cells exposed to 100 mM Cu revealed that 18 out of 30 upregulated proteins are related to the production and conversion of energy, amino acids biosynthesis, and stress responses. Ten of these last proteins were also up-regulated in S. metallicus treated in the presence of 1 mM Cd suggesting that at least in part, a common general response to these two heavy metals. The S. metallicus genome contained two complete cop gene clusters, each encoding a metallochaperone (CopM), a Cu-exporting ATPase (CopA), and a transcriptional regulator (CopT). Transcriptional expression analysis revealed that copM and copA from each cop gene cluster were cotranscribed and their transcript levels increased when S. metallicus was grown either in the presence of Cu or using chalcopyrite (CuFeS2) as oxidizable substrate. This study shows for the first time the presence of a duplicated version of the cop gene cluster in Archaea and characterizes some of the Cu and Cd resistance determinants in a thermophilic archaeon employed for industrial biomining

Epibiontic associations between apostomid ciliates Conidophrys spp. and amphipods associated with fish farms fouling in the western Mediterranean Sea

Fish farms commonly support high abundances of invertebrates, especially amphipods, associated with fouling communities developed over nets, ropes and buoys. Protozoan epibiont ciliates of the genus Conidophrys were observed on three of the most abundant amphipod species collected from ropes of a fish farm in the western Mediterranean Sea. The amphipod species were Ericthonius punctatus that presented the epibiont Conidophrys pitelkae, and Jassa marmorata and Jassa slatteryi with the epibiont C. pilisuctor. The epibionts were found in numbers fluctuating between 1 and 119 individuals in Jassa spp. (median value = 8), higher than the number of epibionts found on E. punctatus that varied between 1 and 39 individuals (median value = 3). The epibiosis on Jassa spp. also showed prevalence values (34.33 %) superior to those of E. punctatus (24 %). Differential distribution of the epibiont species on the surface of basibionts was detected: Conidophrys pilisuctor were more frequently found on the head and gnathopods of Jassa spp., while C. pitelkae were mainly counted on the head of E. punctatus. This is the first time that Conidoprhys were found on these amphipod species

Nuevo registro de pseudocidaris spp. (echinoidea: hemicidaridae) del cretácico inferior (valanginiano-hauteriviano) de Zapatoca (Santander, Colombia)

In this study it is reported and described a regular echinoderm of Pseudocidaris genus in the Rosablanca Formation of Lower Cretaceous at the municipality of Zapatoca (Santander, Colombia). The species shows little sinuosity in the ambulacra and a dyciclic apical disc. An exploratory phylogenetic analysis showed that the lineage of the Zapatoca species was originated in the Callovian with P. Romani and that it is related with P. lusitanica (Oxfordian) and P. clunifera ( Barremian-Aptian)En este  estudio se reporta y describe un equinodermo regular del género Pseudocidaris en la Formación Rosablanca del Cretácico Inferior en el municipio de Zapatoca (Santander, Colombia). La especie presenta poca sinuosidad en los ambulacros y un disco apical dicíclico. Un análisis filogenético exploratorio muestra que el linaje de la especie se originó en el Calloviano con P. romani y que está relacionada con P. lusitánica (Oxfordiano)  y P. clunifera (Barremiano-Aptiano)

Identification of circadian gene variants in bipolar disorder in Latino populations

AbstractBackgroundVariations in circadian genes can impact biological rhythms. Given the rhythm disturbances that characterize bipolar disorder (BD), genes encoding components of molecular clocks are good candidate genes for the illness.MethodsA family based association analysis of circadian gene single nucleotide polymorphisms (SNPs) and BD was conducted in Latino pedigrees. 884 individuals from 207 pedigrees (473BP phenotype and 411 unaffected family members) were genotyped. Family based single marker association testing was performed. Ancestral haplotypes (SNPs found to be in strong LD defined using confidence intervals) were also tested for association with BD.ResultsMultiple suggestive associations between circadian gene SNPs and BD were noted. These included CSNK1E (rs1534891, p=0.00689), ARNTL (rs3789327, p=0.021172), CSNK1D (rs4510078, p=0.022801), CLOCK (rs17777927, p=0.031664). Individually, none of the SNPs were significantly associated with BD after correction for multiple testing. However, a 4-locus CSNK1E haplotype encompassing the rs1534891 SNP (Z-score=2.685, permuted p=0.0076) and a 3-locus haplotype in ARNTL (Z-score=3.269, permuted p=0.0011) showed a significant association with BD.LimitationsLarger samples are required to confirm these findings and assess the relationship between circadian gene SNPs and BD in Latinos.ConclusionsThe results suggest that ARNTL and CSKN1E variants may be associated with BD. Further studies are warranted to assess the relationships between these genes and BD in Latino populations

Suggestive evidence for association between L-type voltage-gated calcium channel (CACNA1C) gene haplotypes and bipolar disorder in latinos: a family-based association study

artículo -- Universidad de Costa Rica. Centro Investigación en Biología Molecular y Celular, 2013Objectives: Through recent genome-wide association studies (GWASs), several groups have reported significant association between variants in the calcium channel, voltage-dependent, L-type, alpha 1C subunit (CACNA1C) and bipolar disorder (BP) in European and European- American cohorts. We performed a family-based association study to determine whether CACNA1C is associated with BP in the Latino population. Methods: This study included 913 individuals from 215 Latino pedigrees recruited from the USA, Mexico, Guatemala, and Costa Rica. The Illumina GoldenGate Genotyping Assay was used to genotype 58 single-nucleotide polymorphisms (SNPs) that spanned a 602.9-kb region encompassing the CACNA1C gene including two SNPs (rs7297582 and rs1006737) previously shown to associate with BP. Individual SNP and haplotype association analyses were performed using Family-Based Association Test (version 2.0.3) and Haploview (version 4.2) software. Results: An eight-locus haplotype block that included these two markers showed significant association with BP (global marker permuted p = 0.0018) in the Latino population. For individual SNPs, this sample had insufficient power (10%) to detect associations with SNPs with minor effect (odds ratio = 1.15). Conclusions: Although we were not able to replicate findings of association between individual CACNA1C SNPs rs7297582 and rs1006737 and BP, we were able to replicate the GWAS signal reported for CACNA1C through a haplotype analysis that encompassed these previously reported significant SNPs. These results provide additional evidence that CACNA1C is associated with BP and provides the first evidence that variations in this gene might play a role in the pathogenesis of this disorder in the Latino population.This study was funded in part by the National Institutes of Mental Health (RO1-MH0698567) and by the Center of Excellence in Neurosciences at the Paul L. Foster School of Medicine.UCR::Vicerrectoría de Investigación::Unidades de Investigación::Ciencias Básicas::Centro de Investigación en Biología Celular y Molecular (CIBCM

“Pasapalabra” de la Psicología Clínica 2: Una herramienta de aprendizaje basada en el juego

El objetivo general del proyecto de innovación “Pasapalabra” de la Psicología Clínica 2: Una herramienta de aprendizaje basada en el juego era potenciar el aprendizaje activo de términos y conceptos relativos a la Psicología Clínica a través de una herramienta basada en las nuevas tecnologías y el juego. Se basa en el popular concurso “Pasapalabra”, concretamente en la prueba final denominada “El rosco”, en la cual el/la participante debe averiguar palabras a partir de su definición y teniendo como pista la letra inicial de la palabra o una letra contenida en ella. Este proyecto surgió como la continuación del proyecto de innovación concedido en la convocatoria PIMCD 2018-2019. Su propósito era dar continuidad, profundizar y divulgar el proyecto “Pasapalabra” de la Psicología Clínica

Overview of recent TJ-II stellarator results

The main results obtained in the TJ-II stellarator in the last two years are reported. The most important topics investigated have been modelling and validation of impurity transport, validation of gyrokinetic simulations, turbulence characterisation, effect of magnetic configuration on transport, fuelling with pellet injection, fast particles and liquid metal plasma facing components. As regards impurity transport research, a number of working lines exploring several recently discovered effects have been developed: the effect of tangential drifts on stellarator neoclassical transport, the impurity flux driven by electric fields tangent to magnetic surfaces and attempts of experimental validation with Doppler reflectometry of the variation of the radial electric field on the flux surface. Concerning gyrokinetic simulations, two validation activities have been performed, the comparison with measurements of zonal flow relaxation in pellet-induced fast transients and the comparison with experimental poloidal variation of fluctuations amplitude. The impact of radial electric fields on turbulence spreading in the edge and scrape-off layer has been also experimentally characterized using a 2D Langmuir probe array. Another remarkable piece of work has been the investigation of the radial propagation of small temperature perturbations using transfer entropy. Research on the physics and modelling of plasma core fuelling with pellet and tracer-encapsulated solid-pellet injection has produced also relevant results. Neutral beam injection driven Alfvénic activity and its possible control by electron cyclotron current drive has been examined as well in TJ-II. Finally, recent results on alternative plasma facing components based on liquid metals are also presentedThis work has been carried out within the framework of the EUROfusion Consortium and has received funding from the Euratom research and training programme 2014–2018 under Grant Agreement No. 633053. It has been partially funded by the Ministerio de Ciencia, Inovación y Universidades of Spain under projects ENE2013-48109-P, ENE2015-70142-P and FIS2017-88892-P. It has also received funds from the Spanish Government via mobility grant PRX17/00425. The authors thankfully acknowledge the computer resources at MareNostrum and the technical support provided by the Barcelona S.C. It has been supported as well by The Science and Technology Center in Ukraine (STCU), Project P-507F

El impacto del aprendizaje universitario colaborativo el rendimiento académico del estudiante: Una wiki para la ciencia política y de la administración

El objetivo del proyecto es llevar a la práctica una acción formativa basada en la web 2.0 con la participación de profesores y alumnos pertenecientes a distintos grados, facultades y universidades. En concreto, esta iniciativa pretende continuar con la wiki, www.dcpa.wikidot.com, que comenzó a realizarse en 2015 en virtud de la convocatoria de PIMCD. La wiki contribuye a que los estudiantes, de manera colaborativa, diseñen un proyecto educativo de integración curricular a partir de unos supuestos establecidos previamente por el profesor. Por lo tanto, este tipo de experiencia permite crear una base documental de gran utilidad para otros alumnos que estudian este tipo de asignaturas o para cualquier persona que muestren una inquietud o necesidad de buscar, encontrar o ampliar el conocimiento sobre determinadas cuestiones relacionadas con la ciencia política y la ciencia de la administració