Altitudinal effects on habitat selection in two sympatric pipistrelle species

Altitude can profoundly influence the distribution of mammals, although the majority of studies of altitudinal impacts on distribution and abundance examine large-scale effects in mountainous environments. We investigate the potential for altitudinal effects on within habitat distribution in common and soprano pipistrelle bats (Pipistrellus pipistrellus and Pipistrellus pygmaeus) over relatively small scales on the Isle of Man, an island with a maximum altitude of 620 m above sea level. While we found no differences in habitat or altitude usage between the two species, both showed a sharp decline in activity with small increases in altitude within all habitats. This decline was steepest in deciduous and conifer woodland, and more gradual in arable land and heathland. Activity also declined more quickly with increasing altitude in the centre of habitats compared with the edge, and where water was present compared with where water was absent. We suggest that altitude may limit distribution independent of habitat, and thus is an important factor to take into account, in combination with habitat, when designing mammalian conservation strategies

Ageing and sexing the Yellowhammer Emberiza citrinella caliginosa during the non‐breeding season

Individual- or population-level analyses using ringing data require accurate identification of the age and sex of birds in the hand. Many species are difficult to age and sex: work on birds of known age and sex is essential if we are to increase the value of ringing data for these species. In this study we have used molecular sexing techniques and known-age birds to characterise plumage characteristics useful in distinguishing the age and sex of Yellowhammers Emberiza citrinella caliginosa. Tail-feather shape was useful in ageing both adult and first-year birds, supporting current ageing criteria; other features were associated with first-year birds but not with adults. Most birds, but not all, could be sexed using the amount of yellow visible on the side of head and crown. The amount of black on the longest tail-covert shaft and the amount of white on the fifth and sixth tail feathers were useful for identifying both sexes. The rump-feather shaft colour and under-tail covert coloration may be useful for sexing ambiguous birds. Our results provide additional ageing and sexing criteria for E. c. caliginosa and can be used to improve the accuracy of ringing data for this declining subspecies

Post-fledging habitat selection in a rapidly declining farmland bird, the European turtle dove Streptopelia turtur

Post-fledging survival plays a vital role in the dynamics of bird populations and yet is the least studied avian life-stage. Habitat requirements post-fledging may have important implications for behaviour and survival, especially for declining populations in landscapes that have undergone wide-scale anthropogenic modification, resulting in an altered distribution and composition of habitats. The European Turtle Dove is a widespread but rapidly declining species both within the UK and across Europe. Reduced seed food availability is thought to influence breeding success of this species, but it is not known whether post-fledging survival may also be influenced by seed availability. Here, we use leg-ring radio-tag attachments to monitor post-fledging survival and movements in 15 Turtle Dove nestlings from eight nests monitored during 2014 as part of a wider autecological study. Fledglings remained in close proximity to their nest for three weeks post-tagging, spending more than half their time in the immediate vicinity (within ∼ 20 m) of the nest. 95% of foraging trips during this period were within 329 m of the nest and fledglings selected seed-rich habitat (semi-natural grassland, low-intensity grazing, fallow and quarries). Fledglings that were heavier and in better body condition at seven days old were more likely to survive for 30 days post-fledging, and the proportion of available seed-rich habitat was a strong predictor of nestling weight and condition at seven days old. Whilst our sample size is modest, this study highlights the crucial role of food availability in juvenile survival, both while adults are feeding nestlings, and to recently fledged young, and the potential for agri-environment schemes providing foraging and nesting habitats in close proximity to provide important benefits

Editorial: Factors Affecting Host Selection by Mosquitoes: Implications for the Transmission of Vector-Borne Pathogens

Project PGC2018- 095704-B-I00 from the Spanish Ministry of Economy and Competition and from the European Regional Development Fund (FEDER

Personality and parasites: sex-dependent associations between avian malaria infection and multiple behavioural traits

The evolution and ecology of consistent behavioural variation, or personality, is currently the focus of much attention in natural populations. Associations between personality traits and parasite infections are increasingly being reported, but the extent to which multiple behavioural traits might be associated with parasitism at the same time is largely unknown. Here, we use a population of great tits, Parus major, to examine whether infection by avian malaria (Plasmodium and Leucocytozoon) is associated with three behavioural traits assayed under standardized conditions. All of these traits are of broad ecological significance and two of them are repeatable or heritable in our population. Here, we show weak correlations between some but not all of these behavioural traits, and sex dependent associations between all three behavioural traits and parasite infection. Infected males showed increased problem-solving performance whereas infected females showed reduced performance; furthermore, uninfected females were four times more likely to solve problems than uninfected males. Infected females were more exploratory than uninfected females, but infection had no effect on males. Finally, infected males were more risk-averse than uninfected males but females were unaffected. Our results demonstrate the potential for complex interactions between consistent personality variation and parasite infection, though we discuss the difficulty of attributing causality in these associations. Accounting for complex parasite-behaviour associations may prove essential in understanding the evolutionary ecology of behavioural variation and the dynamics of host–parasite interactions

New universal ITS2 primers for high-resolution herbivory analyses using DNA metabarcoding in both tropical and temperate zones

DNA metabarcoding is a rapidly growing technique for obtaining detailed dietary information. Current metabarcoding methods for herbivory, using a single locus, can lack taxonomic resolution for some applications. We present novel primers for the second internal transcribed spacer of nuclear ribosomal DNA (ITS2) designed for dietary studies in Mauritius and the UK, which have the potential to give unrivalled taxonomic coverage and resolution from a short-amplicon barcode. In silico testing used three databases of plant ITS2 sequences from UK and Mauritian floras (native and introduced) totalling 6561 sequences from 1790 species across 174 families. Our primers were well-matched in silico to 88% of species, providing taxonomic resolution of 86.1%, 99.4% and 99.9% at the species, genus and family levels, respectively. In vitro, the primers amplified 99% of Mauritian (n = 169) and 100% of UK (n = 33) species, and co-amplified multiple plant species from degraded faecal DNA from reptiles and birds in two case studies. For the ITS2 region, we advocate taxonomic assignment based on best sequence match instead of a clustering approach. With short amplicons of 187–387 bp, these primers are suitable for metabarcoding plant DNA from faecal samples, across a broad geographic range, whilst delivering unparalleled taxonomic resolution

Active blood parasite infection is not limited to the breeding season in a declining farmland bird

Avian blood parasites can have significant impacts on adult breeding birds but studies of parasitism outside the breeding season are rare, despite their potentially important implications for host–parasite dynamics. Here we investigate temporal dynamics of blood parasite infection in adult yellowhammers Emberiza citrinella. We screened blood samples collected between December and April of 2 consecutive winters using PCR. We found a high prevalence of both Haemoproteus and Leucocytozoon parasites, with a mean prevalence of 50% across 2 winters. Prevalence of both parasites was higher during the second, colder winter of the study. Temporal trends differed between the 2 genera, suggesting that chronic Haemoproteus infections gradually disappear throughout the winter but that Leucocytozoon infections exhibit a relapse during late winter, possibly coincident with reduced food availability. Our results highlight the difference in temporal dynamics between 2 blood parasite genera infecting the same host population and emphasize the need for accurate assessment of infection status at appropriate time periods when examining impacts of, and associations with, blood parasite infection. We suggest that further research should investigate the implications of over-winter infection for birds’ physiology, behavior, and survival

Testing bespoke management of foraging habitat for European turtle doves Streptopelia turtur

Agri-environment schemes (AES) are increasingly being employed to mitigate biodiversity loss in agricultural environments. The European Turtle Dove Streptopelia turtur is an obligate granivorous bird in rapid decline within both the UK (−96% since 1970) and across continental Europe (−77% since 1980), despite widespread uptake of AES. Here, we assess the efficacy of a potentially new, sown agri-environment option designed to provide abundant, accessible seed for S. turtur during the breeding season. During summer 2011 we compared vegetation structure and seed provision on trial plots to control habitat types (existing agri-environment options thought to potentially provide S. turtur foraging habitat) to assess whether trial plots performed better for foraging S. turtur than control habitats. In September 2011 all trial plots were topped (cut) and half of a subset of trial plots were then scarified (60% of soil surface disturbed). Vegetation structure on topped, and topped and scarified trial plots was measured during summer 2012 to determine which management regime was most effective in maintaining suitable sward structure and seed provision into the second year. No control habitat type produced as much seed important in S. turtur diet as trial plots at any point during year one. Trial plots provided accessible vegetation structure early in the season with no difference in vegetation metrics between trial plots and previously published data on S. turtur foraging locations. However, to allow later access, management is required during mid-June to open up the sward through localized topping or scarification. Vegetation structure during year two was generally too dense to attract foraging S. turtur. However, scarifying trial plots during the September following sowing encouraged self-seeding of Fumaria officinalis (a plant species historically forming a significant proportion of S. turtur diet during the breeding season) into the second year, with this species present in 16% of scarified trial plots compared to only 4% of topped trial plots during year two. Thus, autumn scarification, possibly followed by topping or scarification of part of the trial plots in June, is necessary for trial plots to provide more seed and access for S. turtur than existing agri-environment options during year two. We recommend modifications to our original seed mix in order to reduce vegetation density and improve vegetation structure. The study provides an example of the need to strike the right balance between food abundance and accessibility, through vegetation structure, when designing agri-environment scheme management options that provide food for birds

High prevalence of the neonicotinoid clothianidin in liver and plasma samples collected from gamebirds during autumn sowing

Since neonicotinoid insecticides were introduced to the agricultural market, evidence of the negative impacts of these systemic compounds on non-target species has accumulated. Birds are one of the largest groups of species to inhabit farmland, but the extent of neonicotinoid exposure in avian communities is poorly understood and very little is known about how any exposure may affect wild birds. Here, free-living gamebirds were used as a model group to measure the extent of avian exposure to the neonicotinoid clothianidin via seed treatment. During a typical sowing period of winter cereals treated with clothianidin, blood and liver samples were collected simultaneously from individual hunted gamebird carcasses, both pre- (n = 18) and post-sowing (n = 57) and were analysed for clothianidin via LC/MS-MS. Body weight, fat score and faecal parasite load were also quantified in the birds to ascertain whether any of these health parameters were associated with clothianidin exposure under field conditions. Clothianidin was detected in 6% of individuals sampled pre-sowing and 89% of individuals sampled post-sowing. The frequency of clothianidin detection in plasma samples and the concentration of clothianidin in liver and plasma samples decreased significantly between the first week and 2-4 weeks post-sowing. Faecal parasite load was positively associated with concentrations of clothianidin in the liver (but not plasma) of partridge species, but there was no association between clothianidin concentration and fat score or body weight, for either sample type. This study provides clear evidence that treated seed is a source of pesticide exposure for gamebirds following autumn sowing. These findings have implications for gamebirds worldwide where seed treatments are in use, and will aid the design of any future avian biomonitoring studies for agrochemical compounds

High rates of infection by blood parasites during the nestling phase in UK Columbids with notes on ecological associations

Studies of blood parasite infection in nestling birds rarely find a high prevalence of infection. This is likely due to a combination of short nestling periods (limiting the age at which nestlings can be sampled) and long parasite prepatent periods before gametocytes can be detected in peripheral blood. Here we examine rates of blood parasite infection in nestlings from three Columbid species in the UK. We use this system to address two key hypotheses in the epidemiology of avian haemoparasites: first, that nestlings in open nests have a higher prevalence of infection; and second, that nestlings sampled at 14 days old have a higher apparent infection rate than those sampled at 7 days old. Open-nesting individuals had a 54% infection rate compared with 25% for box-nesters, probably due to an increased exposure of open-nesting species to dipteran vectors. Nestlings sampled at 14 days had a 68% infection rate compared with 32% in nestlings sampled at 7 days, suggesting that rates of infection in the nest are high. Further work should examine nestlings post-fledging to identify rates of successful parasite infection (as opposed to abortive development within a dead-end host) as well as impacts on host post-fledging survival and behaviour