Hydrological thresholds and basin control over paleoflood records in lakes

The scarcity of long-term hydrological data is a barrier to reliably determining the likelihood of floods becoming more frequent and/or intense in a warmer world. Lake sediments preserve characteristic event layers, offering the potential to develop widely distributed and unique chronologies of historical floods. Inferring flood magnitude remains a greater challenge, previously overcome in part by analyzing sharply laminated polar or alpine sequences. Here we demonstrate an approach to obtain flood frequency and magnitude data from an unexploited resource, the largely visually homogeneous, organic sediments that typify most temperate lakes. The geochemical composition and end-member modeling of sediment trap and adjacent short core particle size data for Brotherswater (northwest England) discriminates the signature of infrequent, coarse-grained flood deposits from seasonal and longer-term allogenic (enhanced discharge and sediment supply during winter) and autogenic (summer productivity, thermal mixing) depositional processes. Comparing the paleoflood reconstruction to local river discharges shows that hydrological thresholds censor event signature preservation, with 4 yr recurrence intervals detectable in delta-proximal sediments declining to 9 yr in the lake center. Event threshold (discharge) and process characterization are essential precursors to discerning flood magnitude from sediment archives. Implementation of our approach in globally prevalent temperate lakes offers a vast, unique repository of long-term hydrological data for hydrologists, climate modelers, engineers, and policy makers addressing future flood risks

Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas

This integrated, multiplatform PanCancer Atlas study co-mapped and identified distinguishing molecular features of squamous cell carcinomas (SCCs) from five sites associated with smokin

Quantifying system disturbance and recovery from historical mining-derived metal contamination at Brotherswater, northwest England

The final publication is available at Springer via https://doi.org/10.1007/s10933-016-9907-1Metal ore extraction in historical times has left a legacy of severe contamination in aquatic ecosystems around the world. In the UK, there are ongoing nationwide surveys of present-day pollution discharged from abandoned mines but few assessments of the magnitude of contamination and impacts that arose during historical metal mining have been made. We report one of the first multi-centennial records of lead (Pb), zinc (Zn) and copper (Cu) fluxes into a lake (Brotherswater, northwest England) from point-sources in its catchment (Hartsop Hall Mine and Hogget Gill processing plant) and calculate basin-scale inventories of those metals. The pre-mining baseline for metal contamination has been established using sediment cores spanning the past 1,500 years and contemporary material obtained through sediment trapping. These data enabled the impact of 250 years of local, small-scale mining (1696 – 1942) to be quantified and an assessment of the trajectory towards system recovery to be made. The geochemical stratigraphy displayed in twelve sediment cores show strong correspondence to the documented history of metal mining and processing in the catchment. The initial onset in 1696 was detected, peak Pb concentrations (>10,000 µg g-1) and flux (39.4 g m-2 y-1) corresponded to the most intensive mining episode (1863-1871) and 20th century technological enhancements were reflected as a more muted sedimentary imprint. After careful evaluation, we used these markers to augment a Bayesian age-depth model of the independent geochronology obtained using radioisotope dating (14C, 210Pb, 137Cs and 241Am). Total inventories of Pb, Zn and Cu for the lake basin during the period of active mining were 15,415 kg, 5,897 kg and 363 kg, respectively. The post-mining trajectories for Pb and Zn project a return to pre-mining levels within 54-128 years for Pb and 75-187 years for Zn, although future remobilisation of metal-enriched catchment soils and floodplain sediments could perturb this recovery. We present a transferable paleolimnological approach that highlights flux-based assessments are vital to accurately establish the baseline, impact and trajectory of mining-derived contamination for a lake catchment

Seuils et mouilles

Dépret Thomas, Gautier Emmanuelle, Hooke Janet M. Seuils et mouilles. In: Le Cher. Histoire et archéologie d’un cours d’eau. Tours : Fédération pour l'édition de la Revue archéologique du Centre de la France, 2013. p. 157. (Supplément à la Revue archéologique du centre de la France, 43

Seuils et mouilles

Dépret Thomas, Gautier Emmanuelle, Hooke Janet M. Seuils et mouilles. In: Le Cher. Histoire et archéologie d’un cours d’eau. Tours : Fédération pour l'édition de la Revue archéologique du Centre de la France, 2013. p. 157. (Supplément à la Revue archéologique du centre de la France, 43

Impact of the native-state stability of human lysozyme variants on protein secretion by Pichia pastoris

We report the secreted expression by Pichia pastoris of two human lysozyme variants F57I and W64R, associated with systemic amyloid disease, and describe their characterization by biophysical methods. Both variants have a substantially decreased thermostability compared with wild-type human lysozyme, a finding that suggests an explanation for their increased propensity to form fibrillar aggregates and generate disease. The secreted yields of the F57I and W64R variants from P. pastoris are 200- and 30-fold lower, respectively, than that of wild-type human lysozyme. More comprehensive analysis of the secretion levels of 10 lysozyme variants shows that the low yields of these secreted proteins, under controlled conditions, can be directly correlated with a reduction in the thermostability of their native states. Analysis of mRNA levels in this selection of variants suggests that the lower levels of secretion are due to post-transcriptional processes, and that the reduction in secreted protein is a result of degradation of partially folded or misfolded protein via the yeast quality control system. Importantly, our results show that the human disease-associated mutations do not have levels of expression that are out of line with destabilizing mutations at other sites. These findings indicate that a complex interplay between reduced native-state stability, lower secretion levels, and protein aggregation propensity influences the types of mutation that give rise to familial forms of amyloid disease