Taxus data

Microsatellite genotypes of trees and seedlings, and field measurements of Taxus baccata trees in 10 populations in Poland

Thermotherapy and Storage Temperature Manipulations Limit the Production of Reactive Oxygen Species in Stored Pedunculate Oak Acorns

For many species, seed storage protocols are still being improved to provide viable seeds of the highest quality. Seed storage is extremely problematic for short-lived seeds categorized as recalcitrant, including pedunculate oak (Quercus robur L.), for which the optimal seed storage protocol involves a temperature of –3 °C and 40% acorn moisture content recommendations. The sensitivity of pedunculated oak seeds to temperature manipulations under preparation for long-term storage has been poorly investigated, particularly in terms of the production of reactive oxygen species (ROS), which are assumed to be determinants of seed longevity. Thermotherapy, the pathogen elimination procedure, did not increase the level of three types of ROS: hydrogen peroxide (H2O2), superoxide anion radical and hydroxyl radical (•OH). The temporal heat stress of thermotherapy resulted in slightly reduced levels of H2O2, indicating activation of the antioxidant systems in acorn preparation for storage. The effect of constant storage temperatures (−3, −5, −7 °C) and their combinations (−3 → −5 °C or −3 → −5 →−7 °C) on ROS levels and seed viability was investigated in three provenances. The highest ROS levels were detected in acorns stored at −7 °C, whereas three-step cold acclimation was beneficial for reducing ROS levels. Interestingly, the levels of H2O2 were not affected by temperature in thermotherapized acorns. In contrast, decreasing storage temperature caused a linear increase in •OH levels in all provenances. The effect of heat stress and cold stress on ROS levels in relation to long-term seed storage of pedunculate oak is discussed here in relation to the seed viability evidenced via germination rates, seedling emergence and electrolyte leakage. Thermotherapy and cold acclimation of acorns can improve their viability after storage by decreasing ROS levels

Dehydration Sensitivity at the Early Seedling Establishment Stages of the European Beech (Fagus sylvatica L.)

Shortage of water is a limiting factor for the growth and development of plants, particularly at early developmental stages. We focused on the European beech (Fagus sylvatica L.), which produces seeds and further seedlings in large intervals of up to ten years. To explore the beech seedling establishment process, six stages referring to embryo expansion were studied to determine sensitivity to dehydration. The characterization of the response of elongating embryonic axes and cotyledons included a viability test before and after dehydration and measurement of the amounts of electrolyte leakage, concentration, and arrangement of storage materials, changes in chaperone proteins related to water deficit, and accumulation of hydrogen peroxide and superoxide anion radicals. Elongating embryonic axes and cotyledons differed in water content, dehydration rates, membrane permeability before and after dehydration, protein, and lipid decomposition pattern, and amount of 44-kDa dehydrin and 22-kDa small heat shock protein (sHSP). Protruding embryonic axes were more sensitive to dehydration than cotyledons, although dehydration caused transient reinduction of three dehydrin-like proteins and sHSP synthesis, which accompany desiccation tolerance. Extended deterioration, including overproduction of hydrogen peroxide and depletion of superoxide anion radicals, was reported in dehydrated embryonic axes longer than 10 mm characterized by highly elevated cellular leakage. The apical part elongating embryonic axes consisting of the radicles was the most sensitive part of the seed to dehydration, and the root apical meristem area was the first to become inviable. The effects of severe dehydration involving ROS imbalance and reduced viability in beech seedlings with embryonic axes longer than 10 mm might help to explain the difficulties in beech seedling establishment observed in drought-affected environments. The conversion of environmental drought into climate-originated oxidative stress affecting beech seedling performance is discussed in this report

Data from: Relative strength of fine-scale spatial genetic structure in paternally vs biparentally inherited DNA in a dioecious plant depends on both sex proportions and pollen-to-seed dispersal ratio

In plants, the spatial genetic structure (SGS) is shaped mainly by gene dispersal and effective population density. Among additional factors, the mode of DNA inheritance and dioecy influence SGS. However, their joint impact on SGS remains unclear, especially in the case of paternally inherited DNA. Using theoretical approximations and computer simulations, here we showed that the relative intensity of SGS measured in paternally and biparentally inherited DNA in a dioecious plant population depends on both the proportion of males and the pollen-to-seed dispersal ratio. As long as males do not prevail in a population, SGS is more intense in paternally than biparentally inherited DNA. When males prevail, the intensity of SGS in paternally vs biparentally inherited DNA depends on the compound effect of sex proportions and the pollen-to-seed dispersal ratio. To empirically validate our predictions, we used the case of Taxus baccata, a dioecious European tree. First, we showed that mitochondrial DNA (mtDNA) in T. baccata is predominantly (98%) paternally inherited. Subsequently, using nuclear DNA (nuDNA) and mitochondrial microsatellite data, we compared the fine-scale SGS intensity at both marker types in two natural populations. The population with equal sex proportions showed stronger SGS in mtDNA than in nuDNA. On the other hand, we found lower SGS intensity in mtDNA than in nuDNA in the population with 67% males. Thus, the empirical results provided good support for the theoretical predictions, suggesting that knowledge about SGS in paternally vs biparentally inherited DNA may provide insight into effective sex proportions within dioecious populations

Effect of seed storage temperature on fine root development and mycorrhizal colonization of young Populus nigra seedlings

International audienceAbstractKey messageSeed storage temperature influences root anatomy of the endangered Populus nigra, and consequently may alter nutrient absorption. A lower temperature during seed storage (−20 and −196 °C) may preserve the potential for a suitable root system development after germination.ContextSeed storage conditions can be an important determinant of later seedling growth of Populus nigra L., an endangered tree species.AimsWe tested whether long-term seed storage temperature, −10, −20 or −196 °C, affects the pattern of seedling root traits responsible for resource acquisition as compared to seedlings of fresh seeds.MethodsWe analysed the morphology, anatomy, degree of mycorrhizal colonization, and biochemical composition of roots developed from seed stored for 24 months at five different temperatures (from 3 to −196 °C) commonly used to preserve genetic resources.ResultsExcept for root anatomy, we found no relationship between seed storage temperature and the root traits of seedlings. Among the various storage conditions, the proportion of roots with primary development in the first four orders was similar in seedlings developed from fresh seeds of from seeds stored at −196 or −20 °C. Nitrogen content in the roots was positively correlated with the proportion of (i) roots with primary development and (ii) the cortex width in the root diameter.ConclusionsHigher temperatures during seed storage reduced the proportion of roots with absorptive function (with primary development). Therefore, for preservation of P. nigra seeds we recommend lower temperatures such as −20 and −196 °C

Taxus_Coord_SSR_data

Data for individual trees include coordinates (ETRS89 system, in meters) and genotypes at 6 nuclear microsatellite loci (2 columns per locus) and 1 mitochondrial locus (1 column). Zero is used for missing data. Individuals are grouped into 2 populations (column named "Population")

Optimal seed water content and storage temperature for preservation of Populus nigra L. germplasm

International audienceContextBlack poplar (Populus nigra L.) is an alluvial forest tree species whose genetic pool is decreasing in Europe. Poplar trees produce short-lived seeds that do not store well.AimThe feasibility of seed storage in conventional and cryogenic conditions after their desiccation from water content (WC) of 0.15 to 0.07 g H2O g−1 dry mass (g g−1) was investigated.MethodsSeed germinability was evaluated (seeds with a radicle and green cotyledons were counted) after storage of seeds for a period of 3 to 24 months at different temperatures: 20°, 10°, 3°, −3°, −10°, −20° or −196°C.ResultsSeeds desiccated to a 0.07 g g−1 WC can be stored successfully at −10 °C and −20 °C for at least 2 years. A significant decrease in germination was observed only after 12 months of seed storage (WC 0.15 g g−1) at temperatures above 0 °C. We demonstrated that both fresh (0.15 g g−1 WC) and desiccated (0.07 g g−1 WC) seeds can be preserved at −196 °C for at least 2 years.ConclusionsSeed storage temperature and time of storage were statistically significant factors affecting seed storability. The presented data provide a foundation for the successful gene banking of P. nigra seeds

Identification of DNA Methylation Changes in European Beech Seeds during Desiccation and Storage

Ageing and deterioration of seeds is a major problem for the maintenance of seed quality and viability during long-term storage. Prediction of early stages of seed deterioration in order to point out the plantlets’ regeneration time is a major challenge of successful storage. In preserved seeds, damages accumulate within cells at the rate mainly related to their moisture content and temperature of storage. Current research reveals global alterations in DNA methylation in lipid-rich intermediate seeds during desiccation and storage at various regimes covering nonoptimal and optimal conditions. We show for the first time that monitoring of 5-methylcytosine (m5C) level in seeds can be used as a truly universal viability marker regardless of postharvest category of seeds and their composition. For seeds stored up to three years, in varied conditions, moisture content, temperature, and time of storage had significant influence on seedling emergence and DNA methylation (p < 0.05). Similarities among lipid-rich intermediate and orthodox seeds regarding different reactions of embryonic axes and cotyledons to desiccation are newly revealed. Along with previous studies on seeds dramatically different in desiccation tolerance (recalcitrant vs. orthodox), results regarding lipid-rich seeds positioned in-between (intermediate) prove that maintaining global DNA methylation status is crucial for maintaining seed viability