27 research outputs found
FeII4L4 Tetrahedron Binds to Nonpaired DNA Bases.
A water-soluble self-assembled supramolecular FeII4L4 tetrahedron binds to single stranded DNA, mismatched DNA base pairs, and three-way DNA junctions. Binding of the coordination cage quenches fluorescent labels on the DNA strand, which provides an optical means to detect the interaction and allows the position of the binding site to be gauged with respect to the fluorescent label. Utilizing the quenching and binding properties of the coordination cage, we developed a simple and rapid detection method based on fluorescence quenching to detect unpaired bases in double-stranded DNA.The authors acknowledge support from the UK Engineering and Physical Sciences Research Council (EPSRC EP/M008258/1, EPSRC EP/P027067/1, and EPSRC EP/L015978/1). This project has received funding from the European Unionâs Horizon 2020 research and innovation program under the Marie Sklodowska-Curie grant agreement No 64219
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Enantiopure [Cs+/XeâCryptophane]âFeII4L4 Hierarchical Superstructures.
Hierarchically nested hosts offer new opportunities to control the guest binding of the inner host, functionalize the cavity of the outer host, and investigate communication between different layers. Here we report a self-assembled triazatruxene-based FeII4L4 capsule, which was able to encapsulate a covalent cage, cryptophane-111 (CRY). The resulting cage-in-cage complex was capable of accommodating a cesium cation or xenon atom with altered guest binding behavior compared to the CRY alone. A crystal structure of the Russian doll complex [Cs+âCRY]âFeII4L4 unambiguously demonstrated the unusual encapsulation of a cation within a capsule bearing a 8+ charge. Moreover, the binding of enantiopure CRY occurred with high enantioselectivity (530-fold) between the two enantiomers of the tetrahedron. This discrimination resulted in stereochemical information transfer from the inner covalent cage to the outer self-assembled capsule, leading to the formation of enantiopure [guestâcage]âcage complexes. The stereochemistry of the tetrahedron persisted even after displacement of CRY with an achiral guest.European Research Council (695009), the UK Engineering and Physical Sciences Research Council (EPSRC, EP/P027067/1
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Hydrogen-Bond-Assisted Symmetry Breaking in a Network of Chiral Metal-Organic Assemblies.
Herein we elucidate the interplay of chiral, chelate, solvent, and hydrogen-bonding information in the self-assembly of a series of new three-dimensional metal-organic architectures. Enantiopure ligands, each containing H-bond donors and acceptors, form different structures, depending on the ratio in which they are combined: enantiopure components form M4L4 assemblies, whereas racemic mixtures form M3L3 stacks. Chiral amplification within M3L3 enantiomers was observed when a 2:1 ratio of R and S subcomponent enantiomers was employed. Simply switching the solvent (from MeCN to MeOH) or chelating unit (from bidentate to tridentate) increased the diversity of structures that can be generated from these building blocks, leading to the selective formation of novel M2L2 and M3L2 assemblies. The addition of achiral ligand building blocks resulted in the formation of further structures: When an achiral subcomponent was combined with its R and S chiral congeners, a three-layer heteroleptic architecture was generated, with the achiral unit sitting at the top of the stack. When combined with the S enantiomer only, however, the achiral unit assembled in the center of the structure, thus demonstrating the selective placement of achiral units within chiral systems. Further sorting experiments revealed that combining R and S stereocenters within a single ligand led to diastereoselective product generation. These results show how geometric complementarity between different ligands impacts upon the degree of hydrogen-bonding within the assembly, stabilizing specific low-symmetry architectures from among many possible structural outcomes
Deoxyribonucleic Acid Encoded and Size-Defined Ï-Stacking of Perylene Diimides
Natural photosystems use protein scaffolds to control intermolecular interactions that enable exciton flow, charge generation, and long-range charge separation. In contrast, there is limited structural control in current organic electronic devices such as OLEDs and solar cells. We report here the DNA-encoded assembly of Ï-conjugated perylene diimides (PDIs) with deterministic control over the number of electronically coupled molecules. The PDIs are integrated within DNA chains using phosphoramidite coupling chemistry, allowing selection of the DNA sequence to either side, and specification of intermolecular DNA hybridization. In this way, we have developed a âtoolboxâ for construction of any stacking sequence of these semiconducting molecules. We have discovered that we need to use a full hierarchy of interactions: DNA guides the semiconductors into specified close proximity, hydrophobicâhydrophilic differentiation drives aggregation of the semiconductor moieties, and local geometry and electrostatic interactions define intermolecular positioning. As a result, the PDIs pack to give substantial intermolecular Ï wave function overlap, leading to an evolution of singlet excited states from localized excitons in the PDI monomer to excimers with wave functions delocalized over all five PDIs in the pentamer. This is accompanied by a change in the dominant triplet forming mechanism from localized spinâorbit charge transfer mediated intersystem crossing for the monomer toward a delocalized excimer process for the pentamer. Our modular DNA-based assembly reveals real opportunities for the rapid development of bespoke semiconductor architectures with molecule-by-molecule precision
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Glucose Binding Drives Reconfiguration of a Dynamic Library of Urea-Containing Metal-Organic Assemblies.
A bis-urea-functionalized ditopic subcomponent assembled with 2-formylpyridine and FeII , resulting in a dynamic library of metal-organic assemblies: an irregular FeII4 L6 structure and three FeII2 L3 stereoisomers: left- and right-handed helicates and a meso-structure. This library reconfigured in response to the addition of monosaccharide derivatives, which served as guests for specific library members, and the rate of saccharide mutarotation was also enhanced by the library. The (P) enantiomer of the FeII2 L3 helical structure bound ÎČ-D-glucose selectively over α-D-glucose. As a consequence, the library collapsed into the (P)-FeII2 L3 helicate following glucose addition. The α-D-glucose was likewise transformed into the ÎČ-D-anomer during equilibration and binding. Thus, ÎČ-D-glucose and (P)-3 amplified each other in the product mixture, as metal-organic and saccharide libraries geared together into a single equilibrating system.European Research Council (695009), UK Engineering and Physical Sciences Research Council (EPSRC EP/P027067/1), National Natural Science Foundation of China (No. 21971210), Natural Science Foundation of Shaanxi Province (2019KJXX-062) and the Chinese Scholarship Council (CSC), the Alexander von Humboldt Foundation for a Feodor Lynen Research Fellowship, the Rashkind Family Endowment, the Chenery Endowment, and the Donors of the American Chemical Society Petroleum Research Fun
Data-driven discovery of molecular photoswitches with multioutput Gaussian processes
Photoswitchable molecules display two or more isomeric forms that may be accessed using light. Separating the electronic absorption bands of these isomers is key to selectively addressing a specific isomer and achieving high photostationary states whilst overall red-shifting the absorption bands serves to limit material damage due to UV-exposure and increases penetration depth in photopharmacological applications. Engineering these properties into a system through synthetic design however, remains a challenge. Here, we present a data-driven discovery pipeline for molecular photoswitches underpinned by dataset curation and multitask learning with Gaussian processes. In the prediction of electronic transition wavelengths, we demonstrate that a multioutput Gaussian process (MOGP) trained using labels from four photoswitch transition wavelengths yields the strongest predictive performance relative to single-task models as well as operationally outperforming time-dependent density functional theory (TD-DFT) in terms of the wall-clock time for prediction. We validate our proposed approach experimentally by screening a library of commercially available photoswitchable molecules. Through this screen, we identified several motifs that displayed separated electronic absorption bands of their isomers, exhibited red-shifted absorptions, and are suited for information transfer and photopharmacological applications. Our curated dataset, code, as well as all models are made available at https://github.com/Ryan-Rhys/The-Photoswitch-Dataset
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Electrically Induced Mixed Valence Increases the Conductivity of Copper Helical Metallopolymers
Abstract: Controlling the flow of electrical current at the nanoscale typically requires complex topâdown approaches. Here, a bottomâup approach is employed to demonstrate resistive switching within molecular wires that consist of doubleâhelical metallopolymers and are constructed by selfâassembly. When the material is exposed to an electric field, it is determined that â25% of the copper atoms oxidize from CuI to CuII, without rupture of the polymer chain. The ability to sustain such a high level of oxidation is unprecedented in a copperâbased molecule: it is made possible here by the double helix compressing in order to satisfy the new coordination geometry required by CuII. This mixedâvalence structure exhibits a 104âfold increase in conductivity, which is projected to last on the order of years. The increase in conductivity is explained as being promoted by the creation, upon oxidation, of partly filled d z 2 orbitals aligned along the mixedâvalence copper array; the longâlasting nature of the change in conductivity is due to the structural rearrangement of the doubleâhelix, which poses an energetic barrier to reâreduction. This work establishes helical metallopolymers as a new platform for controlling currents at the nanoscale
Deoxyribonucleic Acid Encoded and Size-Defined Ï-Stacking of Perylene Diimides.
Funder: University of CambridgeNatural photosystems use protein scaffolds to control intermolecular interactions that enable exciton flow, charge generation, and long-range charge separation. In contrast, there is limited structural control in current organic electronic devices such as OLEDs and solar cells. We report here the DNA-encoded assembly of Ï-conjugated perylene diimides (PDIs) with deterministic control over the number of electronically coupled molecules. The PDIs are integrated within DNA chains using phosphoramidite coupling chemistry, allowing selection of the DNA sequence to either side, and specification of intermolecular DNA hybridization. In this way, we have developed a "toolbox" for construction of any stacking sequence of these semiconducting molecules. We have discovered that we need to use a full hierarchy of interactions: DNA guides the semiconductors into specified close proximity, hydrophobic-hydrophilic differentiation drives aggregation of the semiconductor moieties, and local geometry and electrostatic interactions define intermolecular positioning. As a result, the PDIs pack to give substantial intermolecular Ï wave function overlap, leading to an evolution of singlet excited states from localized excitons in the PDI monomer to excimers with wave functions delocalized over all five PDIs in the pentamer. This is accompanied by a change in the dominant triplet forming mechanism from localized spin-orbit charge transfer mediated intersystem crossing for the monomer toward a delocalized excimer process for the pentamer. Our modular DNA-based assembly reveals real opportunities for the rapid development of bespoke semiconductor architectures with molecule-by-molecule precision.ERC Horizon 2020 (grant agreement No 670405 and No 803326)
EPSRC Tier-2 capital grant EP/P020259/1.
Winton Advanced Research Programme for the Physics of Sustainability. Simons Foundation (Grant 601946).
Swedish research council, VetenskapsrÄdet 2018-0023
The James Webb Space Telescope Mission
Twenty-six years ago a small committee report, building on earlier studies,
expounded a compelling and poetic vision for the future of astronomy, calling
for an infrared-optimized space telescope with an aperture of at least .
With the support of their governments in the US, Europe, and Canada, 20,000
people realized that vision as the James Webb Space Telescope. A
generation of astronomers will celebrate their accomplishments for the life of
the mission, potentially as long as 20 years, and beyond. This report and the
scientific discoveries that follow are extended thank-you notes to the 20,000
team members. The telescope is working perfectly, with much better image
quality than expected. In this and accompanying papers, we give a brief
history, describe the observatory, outline its objectives and current observing
program, and discuss the inventions and people who made it possible. We cite
detailed reports on the design and the measured performance on orbit.Comment: Accepted by PASP for the special issue on The James Webb Space
Telescope Overview, 29 pages, 4 figure
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Self-Assembly of Double-Helical Metallopolymers.
Metal-containing polymers, or metallopolymers, have diverse applications in the fields of sensors, catalysis, information storage, optoelectronics, and neuromorphic computing, among other areas. The approach of metal-templated subcomponent self-assembly using dynamic covalent linkages allows complex architectures to be formed with relative synthetic ease. The dynamic nature of the linkages between subunits in these systems facilitates error checking during the assembly process and also provides a route to disassemble the structure, rendering these materials recyclable. This Account summarizes a class of double-helical metallopolymers. These metallopolymers are formed via subcomponent self-assembly and consist of two conjugated helical strands wrapping a linear array of CuI centers. Starting from discrete model helicates, we discuss how, through the judicious design of subcomponents, long helical metallopolymers can be obtained and detail their subsequent assembly into nanometer-scale aggregates. Two approaches to generate these helical metallopolymers are compared. We describe methods to govern (i) the length of the metallopolymers, (ii) the relative orientations (head-to-head vs head-to-tail) of the two organic strands, and (iii) the screw-sense of the double helix. Achieving structural control allowed the growth behavior of these systems to be probed. The structure influenced properties in ways that are relevant to specific applications; for example, the length of the metallopolymer determines the color of the light it emits in solution. In the solid state, the ionic nature of these helices renders them useful as both emitters and ionic additives in light-emitting electrochemical cells. Moreover, recent experimental work has clarified the role of the linear array of Cu ions in the transport of charge through these materials. The conductivity displayed by a film of metallopolymer depends upon its history of applied voltage and current, behavior characteristic of a memristor. In addition to the prospective applications already identified, others may be on the horizon, potentially combing stimuli-responsive electronic behavior with the chirality of the helical twist