286 research outputs found

    Phylogenetic analysis of eIF4E-family members

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    BACKGROUND: Translation initiation in eukaryotes involves the recruitment of mRNA to the ribosome which is controlled by the translation factor eIF4E. eIF4E binds to the 5'-m(7)Gppp cap-structure of mRNA. Three dimensional structures of eIF4Es bound to cap-analogues resemble 'cupped-hands' in which the cap-structure is sandwiched between two conserved Trp residues (Trp-56 and Trp-102 of H. sapiens eIF4E). A third conserved Trp residue (Trp-166 of H. sapiens eIF4E) recognizes the (7)-methyl moiety of the cap-structure. Assessment of GenBank NR and dbEST databases reveals that many organisms encode a number of proteins with homology to eIF4E. Little is understood about the relationships of these structurally related proteins to each other. RESULTS: By combining sequence data deposited in the Genbank databases, we have identified sequences encoding 411 eIF4E-family members from 230 species. These sequences have been deposited into an internet-accessible database designed for sequence comparisons of eIF4E-family members. Most members can be grouped into one of three classes. Class I members carry Trp residues equivalent to Trp-43 and Trp-56 of H. sapiens eIF4E and appear to be present in all eukaryotes. Class II members, possess Trp→Tyr/Phe/Leu and Trp→Tyr/Phe substitutions relative to Trp-43 and Trp-56 of H. sapiens eIF4E, and can be identified in Metazoa, Viridiplantae, and Fungi. Class III members possess a Trp residue equivalent to Trp-43 of H. sapiens eIF4E but carry a Trp→Cys/Tyr substitution relative to Trp-56 of H. sapiens eIF4E, and can be identified in Coelomata and Cnidaria. Some eIF4E-family members from Protista show extension or compaction relative to prototypical eIF4E-family members. CONCLUSION: The expansion of sequenced cDNAs and genomic DNAs from all eukaryotic kingdoms has revealed a variety of proteins related in structure to eIF4E. Evolutionarily it seems that a single early eIF4E gene has undergone multiple gene duplications generating multiple structural classes, such that it is no longer possible to predict function from the primary amino acid sequence of an eIF4E-family member. The variety of eIF4E-family members provides a source of alternatives on the eIF4E structural theme that will benefit structure/function analyses and therapeutic drug design

    Evaluación de fibra dietética, isoflavonas y compuestos fenólicos con propiedades antioxidantes y antimicrobianas de quinoa (Chenopodium quinoa Willd.)

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    The consumption of quinoa (Chenopodium quinoa Willd.) has been steadily increasing due to its high nutritional value and health benefits associated with its high antioxidant capacity. The objective of this study was to determine the contents of dietary fiber, polyphenols, flavonoids and isoflavones, and how they contribute to the antioxidant and antimicrobial activity of six ecotypes of quinoa cultivated in three different zones of Chile. The ecotypes studied were: Ancovinto and Cancosa (Northern zone), Cáhuil and Faro (Central zone), and Regalona and Villarrica (Southern zone). The results indicate that all Chilean quinoa ecotypes could be considered as good sources of dietary fiber (12.23 g 100 g-1 dry matter) and polyphenols (161.32 mg Gallic Acid Equivalents (GAE) 100 g-1 dry matter). The North and Central ecotypes exhibited the highest isoflavone concentration. The Northern Cancosa was the ecotype that showed the highest flavonoid content (211.06 mg Catechin Equivalents (CAE) 100 g-1 dry matter). Based on the ORAC (Oxygen Radical Absorbance Capacity) assay, Ancovinto, Cancosa and Faro presented the highest antioxidant capacity (67.6 mmol Trolox Equivalents (TE) 100 g-1 dry matter). Regarding antimicrobial activity, Regalona ecotype showed the best performance against Saccharomyces cerevisiae and Listeria innocua. The bioactive compounds found in this study add new knowledge to the antioxidant and antimicrobial activity of Chilean quinoa seeds.El consumo de quinua (Chenopodium quinoa Willd.) está aumentando debido a su valor nutricional y beneficios para la salud relacionados con su capacidad antioxidante. El objetivo de presente estudio fue determinar los contenidos de fibra dietética, polifenoles, flavonoides e isoflavonas, y cómo estos compuestos contribuyen a la actividad antioxidante y antimicrobiana de seis ecotipos de quinua cultivados en tres zonas de Chile. Las muestras de quinua de la zona Norte se denominan Ancovinto y Cancosa, de la zona Centro se llaman Cáhuil y Faro, y de la zona Sur se denominan Regalona y Villarrica. Los resultados mostraron que todos los ecotipos de quinua chilena pueden considerarse buena fuente de fibra dietética (12,23 g 100 g-1 materia seca) y de polifenoles (161,32 mg de Equivalentes de Acido Gálico (EAG) 100 g-1 materia seca). Los ecotipos de la zona Norte y Centro mostraron la mayor concentración de isoflavonas. El ecotipo Cancosa, de la zona Norte, fue el que mostró el mayor contenido de flavonoides (211,06 mg Equivalentes de Catequina (ECA) 100 g-1 materia seca). Basado en el ensayo ORAC (del inglés Oxigen Radical Absorbance Capacity), los ecotipos Ancovinto, Cancosa y Faro, presentaron en promedio la mayor capacidad antioxidante (67,6 mmol de Equivalentes Trolox (ET) 100 g-1 materia seca). El ecotipo Regalona mostró la más alta actividad antimicrobiana frente a Saccharomyces cerevisiae y Listeria innocua. Los compuestos bioactivos encontrados en este estudio aportan nuevos conocimientos a la actividad antioxidante y antimicrobiana de las semillas de quinua chilena.Fil: Vega Gálvez, Antonio. Universidad de La Serena; ChileFil: Zura, Liliana. Universidad de La Serena; ChileFil: Lutz, Mariane. Universidad de Vlparaíso; ChileFil: Jagus, Rosa Juana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Agüero, Maria Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Pastén, Alexis. Universidad de La Serena; ChileFil: Di Scala, Karina Cecilia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mar del Plata; Argentina. Universidad Nacional de Mar del Plata. Facultad de Ingeniería; ArgentinaFil: Uribe, Elsa. Universidad de La Serena; Chil

    Evaluation and characterization of nutritional, microbiological and sensory properties of beet greens

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    Growing interest of consumers on incorporate healthy foods into their diets has triggered extensive research in finding and developing new food products that meet their expectations. Leaves of beet plants are an alternative source of appreciable value albeit they are usually discarded at the time of beetroot harvest. The aim of this study was to evaluate and characterize the nutritional, microbiological and sensory quality of beet greens as a prelude to the development of new products from them. Beet greens represents approximately 50% of harvested material. The proximate composition of leaves and its anti-nutritional factors (oxalate, phytates and tanins) were in the range of commonly consumed leafy vegetables, standing out for its high contents of protein, fat, fiber and iron and low content of phytates and tanins. Contents of phytochemical compounds, especially carotenoids and betalains, were higher than those reported for commonly consumed leafy vegetables, resulting in a high antioxidant potential. Microbiological counts were in the typical range for fresh consumed leafy vegetables while, sensorial quality resulted adequate with highly appreciated characteristics in beet greens such as red veins and green blade. This work sets the basis for several recovery possibilities such as development of a minimally processed product for fresh consumption and the extraction of phytochemical compounds from this resource.Fil: Fernandez, María Verónica. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Jagus, Rosa Juana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Agüero, Maria Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; Argentin

    Combinational approaches for antimicrobial packaging: natamycin and nisin

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    Food safety is a global priority and one of the major objectives of the current food legislation. The right combination of strategies for food industrialization including the packaging step, ensures the achievement of that objective. New food products and new industrialization processes impose the need for the development of new packaging materials that assure food protection and that address the changing demands of the food industry and of the consumers. The general perception of the importance of minimizing the environmental damage has catalyzed the exploration of new bio-based packaging materials such as biodegradable and edible films because they are environmental friendly. Additionally, consumer demand for more natural foods has promoted the research about natural antimicrobials like natamycin and nisin.In this chapter, it is reviewed the available information on antimicrobial packaging containing the natural antimicrobials natamycin and nisin simultaneously and, in particular, its antimicrobial effectiveness. According to published and new results evaluated, packaging containing natamycin and nisin is a very efficient strategy to control food contamination. Additionally, the use of biodegradable materials to produce the packaging contributes to environment protection.Fil: Jagus, Rosa Juana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Gerschenson, Lia Noemi. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; ArgentinaFil: Ollé Resa, Carolina Patricia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; Argentin

    Development of an aqueous ultrasound‐assisted extraction process of bioactive compounds from beet leaves: A proposal for reducing losses and increasing biomass utilisation

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    BACKGROUND: Red beet plants are cultivated worldwide for the consumption of their roots, generating large amounts of unexploited by-products. In particular, beet leaves (BLs) represent about 50% of the whole plant and are usually discarded as waste. This constitutes not only an economic issue, since multiple resources invested in the production will be wasted, but also an environmental problem because of the pollution associated with their disposal. However, BLs comprise an important source of functional compounds (polyphenols and betalains) that could be recovered from the raw material, representing a sustainable solution for the underutilization of this by-product. This study proposes the recovery of polyphenols and betalains using an aqueous ultrasound-assisted extraction (UAE) process at different powers (35, 50, and 100 W) that was characterized and optimized. RESULTS: UAE significantly enhanced the recovery of bioactive compounds and shortened the time required for extraction in comparison with traditional macerations (35 < 50 < 100 W). During UAE, the temperature of the systems increased as a function of the power applied, favouring the recovery of these phytochemicals. Additionally, a Box–Behnken design and response surface methodology were employed to optimize UAE conditions (90 W ultrasound power, 1:20 solid:liquid ratio, 16 min extraction time), under which the yields were 14.9 mg g−1 (polyphenols), 949.1 μg g−1 (betaxanthins), and 562.2 μg g−1 (betacyanins), consistent with the values predicted by the models. CONCLUSION: This study enabled the development of a green-solvent UAE process that constitutes an effective post-harvest by-products strategy to minimize losses and increase biomass utilization through the recovery of bioactive compounds from BLs, promoting sustainability in the agri-food chain.Fil: Nutter, Julia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Fernandez, María Verónica. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Jagus, Rosa Juana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Agüero, María Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; Argentin

    Fruit and vegetable smoothies preservation with natural antimicrobials for the assurance of safety and quality

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    Current consumption trends indicate a clear increased interest in more natural, nutritious and healthier foods. Accordingly, natural fruits and vegetables (F&V) based beverages (juices, smoothies) companies showed great growth, since perceived as a practical way of ingesting the F&V nutrients and bioactives. However, when untreated, these products have a short shelf-life, mainly due to microbial spoilage. The combination of natural antimicrobials for their preservation constitutes an option in line with consumers’ requirements. This study aims to evaluate different combinations of natural antimicrobials, nisin, natamycin, green tea extract (GTE) and citric acid, to preserve the quality of a mixed F&V smoothie, extending their shelf-life and ensuring their safety. The results obtained suggest that a treatment with nisin 12.5 mg/kg natamycin 200 mg/kg and citric acid (until pH 3.5) could achieve a shelf-life extension of 14 d, a product with great nutritional and microbiological quality until 28 d of storage at 5 °C. Moreover, this treatment would allow controlling a 6 log CFU/mL Listeria monocytogenes contamination. Furthermore, if GTE (0.2%) is added to that combination, a product with fortified antioxidant properties (more than 10 times higher than control) is achieved, fulfilling the requirements of the most demanding natural products consumers.Fil: Nieva, S. G.. Universidad de Buenos Aires. Facultad de Ingeniería. Departamento de Ingeniería Química; ArgentinaFil: Jagus, Rosa Juana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Agüero, Maria Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Fernandez, María Verónica. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; Argentin

    Ultrasound and Its Combination with Natural Antimicrobials: Effects on Shelf Life and Quality Stability of a Fruit and Vegetable Smoothie

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    Fruit and vegetable natural beverage market is growing around the world, but their intrinsic characteristics lead to a high microbial and enzymatic activity, showing a short shelf life when not treated. The present work aims to evaluate the effect of ultrasound (US) treatments on the main spoilage factors and some quality indicators of a mixed fruit and vegetable smoothie (F&VS). Likewise, the advantages of combining US with green tea extract (GTE), nisin (Ni), or natamycin (Na) on the shelf life and stability of the F&VS were assessed. Temperature control was needed to avoid high temperatures during treatment and consequent nutrients and organoleptic degradation. Length of treatment lower than 15 min was required to avoid poliphenoloxidase activation. Ultrasound-selected treatment (UST) was of 70% of amplitude during 4 min, since presented the greatest reduction of peroxidase activity (71.6%) and well performance on microbial control. Both UST and UST + GTE treatments extended F&VS microbial shelf life by 1 week, while UST + Na and UST + Ni by at least 2 weeks. UST greatly increased betalain extractability (55–80%). Its combination with GTE significantly increased the TPC and the antioxidant capacity of the product, as well as enhanced betalain stability during storage. Finally, remarkable results on Listeria initial reductions were obtained with UST + Ni (> 4 log) and on Escherichia coli with UST + GTE (1.7 log) when contamination was simulated. Indeed, the potential of US and their combination with natural antimicrobials on quality preservation as well as on shelf life extension and safety assurance of the F&VS was probed with very promising results.Fil: Casco, María de Los Ángeles. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de Industrias. Instituto de Tecnología de Alimentos y Procesos Químicos. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Ciudad Universitaria. Instituto de Tecnología de Alimentos y Procesos Químicos; ArgentinaFil: Jagus, Rosa Juana. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Agüero, Maria Victoria. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; ArgentinaFil: Fernandez, María Verónica. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Houssay. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long". Universidad de Buenos Aires. Facultad de Ingeniería. Instituto de Tecnologías y Ciencias de la Ingeniería "Hilario Fernández Long"; Argentin

    Large eddy simulation of fuel injection and spray combustion in an engine environment

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    Large eddy simulation of spray combustion in an HSDI engine is carried out in this thesis. The implementation of the code was performed in logical steps that allowed both assessment of the performance of the existing KIVA-LES and later development. The analysis of the liquid annular jet confirmed existence of typical, annular jet exclusive structures like head vortices, stagnation point and recirculation in the inner zone. The influence of the swirl in the ambient domain was found to have profound impact on the development, penetration and radial spreading of the jet. Detailed results were reported in Jagus et al. (2008). The code was further validated by performing an extensive study of large eddy simulation of diesel fuel mixing in an engine environment. The reaction models were switched off in order to isolate the effects of both swirl and the different numerical treatment of LES. Reference RANS simulation was performed and significant differences were found. LES was found to capture much better the influence of the swirl on the liquid and vapour jets, a feature essentially absent in RANS results. Moreover, the predicted penetration of the liquid was much higher for the LES case and more in accordance with experimental measurements. Liquid penetration and subsequent evaporation are very important for prediction of heat release rates and encouraging results formed a good basis to performing a full simulation with models for ignition and combustion employed. The findings were analyzed in the paper by Jagus et al. (2009). Further modifications were introduced into the LES code, among them changes to the combustion model that was originally developed for RANS and calculation of the filter width. A new way of estimating the turbulent timescale (eddy turnover time) assured that the incompatibilities in the numerical treatment were eliminated and benefits of LES maximized. The new combustion model proved to give a very good agreement with experimental data, especially with regard to pressure and accumulated heat release rates. Both qualitative and quantitative results presented a significant improvement with respect to RANS results and old LES formulation. The new LES model was proved to give a very good performance on a spectrum of mesh resolutions. Encouraging results were obtained on a coarse mesh sets therefore proving that the new LES code is able to give good prediction even on mesh sizes more suitable for RANS. Overall, LES was found to be a worthy alternative to the well established RANS methods, surpassing it in many areas, such as liquid penetration prediction, temperature-turbulence coupling and prediction of volume-averaged data. It was also discovered that the improved LES code is capable of producing very good results on under-resolved mesh resolutions, a feature that is especially important in industrial applications and on serial code structure.EThOS - Electronic Theses Online ServiceGBUnited Kingdo
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