Description and evaluation of the Acoustic Profiling of Ocean Currents (APOC) system used on R. V. Oceanus cruise 96 on 11-22 May 1981

The underway current profiling system which consists of a microprocessor controlled data logger that collects and formats data from a four beam Ametek-Straza 300 kHz acoustic Doppler current profiler, heading from the ship's gyrocompass, and navigation information from a Loran-C receiver and a satellite navigation unit is discussed. Data are recorded on magnetic tape and real time is calculated. Time averaging is required to remove effects of ship motion. An intercomparison is made with a moored vector measuring current meter (VMCM). The mean difference in hourly averaged APOC and VMCM currents over the four hour intercomparison is a few mm s minus including: two Gulf Stream crossings, a warm core ring survey, and shallow water in a frontal zone to the east of Nantucket Shoals

Breaking the Chains of Chattel Teamwork: The Future of Black Liberation Theology

"No one built this country on their own. This Nation is great because we built it together. This Nation is great because we worked as a team. This Nation is great because we get each other’s backs. And if we hold fast to that truth, in this moment of trial, there is no challenge too great; no mission too hard." —President Barack Obama, 2012 State of the Union Address President Barack Obama closed his address with "God bless America," thereby giving divine sanction to the myth of U.S. American exceptionalism, that the people of the United States compose "the one indispensable nation in world affairs." Before you write off this explicit mention of God’s blessing as stock presidential rhetoric, note that Obama offers this affirmation in the context of his citation of the prevalent "cynical" mood among the U.S. American public. He attributes this cynicism to lagging faith in U.S. American economic and political institutions. Obama characterizes the people of the United States as struggling to find meaning in a country that is disappointing their hopes and falling short of their values. These issues of faith and meaning warrant theological reflection. The President seems unable to grasp the religious question hiding behind these issues. President Obama’s characterization of U.S. American history as an extended exercise in teamwork required a blatant whitewashing of history. To offer solace to the wayward people of the United States, Obama recast more than three hundred years of chattel slavery, Reconstruction, and Jim Crow segregation into the mold of chattel teamwork

Problem of Time in Quantum Gravity

The Problem of Time occurs because the `time' of GR and of ordinary Quantum Theory are mutually incompatible notions. This is problematic in trying to replace these two branches of physics with a single framework in situations in which the conditions of both apply, e.g. in black holes or in the very early universe. Emphasis in this Review is on the Problem of Time being multi-faceted and on the nature of each of the eight principal facets. Namely, the Frozen Formalism Problem, Configurational Relationalism Problem (formerly Sandwich Problem), Foliation Dependence Problem, Constraint Closure Problem (formerly Functional Evolution Problem), Multiple Choice Problem, Global Problem of Time, Problem of Beables (alias Problem of Observables) and Spacetime Reconstruction/Replacement Problem. Strategizing in this Review is not just centred about the Frozen Formalism Problem facet, but rather about each of the eight facets. Particular emphasis is placed upon A) relationalism as an underpinning of the facets and as a selector of particular strategies (especially a modification of Barbour relationalism, though also with some consideration of Rovelli relationalism). B) Classifying approaches by the full ordering in which they embrace constrain, quantize, find time/history and find observables, rather than only by partial orderings such as "Dirac-quantize". C) Foliation (in)dependence and Spacetime Reconstruction for a wide range of physical theories, strategizing centred about the Problem of Beables, the Patching Approach to the Global Problem of Time, and the role of the question-types considered in physics. D) The Halliwell- and Gambini-Porto-Pullin-type combined Strategies in the context of semiclassical quantum cosmology.Comment: Invited Review: 26 pages including 2 Figures. This v2 has a number of minor improvements and correction

Characterisation of silent and active genes for a variable large protein of Borrelia recurrentis

BACKGROUND: We report the characterisation of the variable large protein (vlp) gene expressed by clinical isolate A1 of Borrelia recurrentis; the agent of the life-threatening disease louse-borne relapsing fever. METHODS: The major vlp protein of this isolate was characterised and a DNA probe created. Use of this together with standard molecular methods was used to determine the location of the vlp1(B. recurrentis A1) gene in both this and other isolates. RESULTS: This isolate was found to carry silent and expressed copies of the vlp1(B. recurrentis A1) gene on plasmids of 54 kbp and 24 kbp respectively, whereas a different isolate, A17, had only the silent vlp1(B. recurrentis A17) on a 54 kbp plasmid. Silent and expressed vlp1 have identical mature protein coding regions but have different 5' regions, both containing different potential lipoprotein leader sequences. Only one form of vlp1 is transcribed in the A1 isolate of B. recurrentis, yet both 5' upstream sequences of this vlp1 gene possess features of bacterial promoters. CONCLUSION: Taken together these results suggest that antigenic variation in B. recurrentis may result from recombination of variable large and small protein genes at the junction between lipoprotein leader sequence and mature protein coding region. However, this hypothetical model needs to be validated by further identification of expressed and silent variant protein genes in other B. recurrentis isolates

A statistical network analysis of the HIV/AIDS epidemics in Cuba

The Cuban contact-tracing detection system set up in 1986 allowed the reconstruction and analysis of the sexual network underlying the epidemic (5,389 vertices and 4,073 edges, giant component of 2,386 nodes and 3,168 edges), shedding light onto the spread of HIV and the role of contact-tracing. Clustering based on modularity optimization provides a better visualization and understanding of the network, in combination with the study of covariates. The graph has a globally low but heterogeneous density, with clusters of high intraconnectivity but low interconnectivity. Though descriptive, our results pave the way for incorporating structure when studying stochastic SIR epidemics spreading on social networks

Critical Phenomena with Linked Cluster Expansions in a Finite Volume

Linked cluster expansions are generalized from an infinite to a finite volume. They are performed to 20th order in the expansion parameter to approach the critical region from the symmetric phase. A new criterion is proposed to distinguish 1st from 2nd order transitions within a finite size scaling analysis. The criterion applies also to other methods for investigating the phase structure such as Monte Carlo simulations. Our computational tools are illustrated at the example of scalar O(N) models with four and six-point couplings for $N=1$ and $N=4$ in three dimensions. It is shown how to localize the tricritical line in these models. We indicate some further applications of our methods to the electroweak transition as well as to models for superconductivity.Comment: 36 pages, latex2e, 7 eps figures included, uuencoded, gzipped and tarred tex file hdth9607.te

Water relations of evergreen and drought-deciduous trees along a seasonally dry tropical forest chronosequence

Seasonally dry tropical forests (SDTF) are characterized by pronounced seasonality in rainfall, and as a result trees in these forests must endure seasonal variation in soil water availability. Furthermore, SDTF on the northern Yucatan Peninsula, Mexico, have a legacy of disturbances, thereby creating a patchy mosaic of different seral stages undergoing secondary succession. We examined the water status of six canopy tree species, representing contrasting leaf phenology (evergreen vs. drought-deciduous) at three seral stages along a fire chronosequence in order to better understand strategies that trees use to overcome seasonal water limitations. The early-seral forest was characterized by high soil water evaporation and low soil moisture, and consequently early-seral trees exhibited lower midday bulk leaf water potentials (ΨL) relative to late-seral trees (−1.01 ± 0.14 and −0.54 ± 0.07 MPa, respectively). Although ΨL did not differ between evergreen and drought-deciduous trees, results from stable isotope analyses indicated different strategies to overcome seasonal water limitations. Differences were especially pronounced in the early-seral stage where evergreen trees had significantly lower xylem water δ18O values relative to drought-deciduous trees (−2.6 ± 0.5 and 0.3 ± 0.6‰, respectively), indicating evergreen species used deeper sources of water. In contrast, drought-deciduous trees showed greater enrichment of foliar 18O (∆18Ol) and 13C, suggesting lower stomatal conductance and greater water-use efficiency. Thus, the rapid development of deep roots appears to be an important strategy enabling evergreen species to overcome seasonal water limitation, whereas, in addition to losing a portion of their leaves, drought-deciduous trees minimize water loss from remaining leaves during the dry season