1,267 research outputs found

    Validation by Measurements of a IC Modeling Approach for SiP Applications

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    The growing importance of signal integrity (SI) analysis in integrated circuits (ICs), revealed by modern systemin-package methods, is demanding for new models for the IC sub-systems which are both accurate, efficient and extractable by simple measurement procedures. This paper presents the contribution for the establishment of an integrated IC modeling approach whose performance is assessed by direct comparison with the signals measured in laboratory of two distinct memory IC devices. Based on the identification of the main blocks of a typical IC device, the modeling approach consists of a network of system-level sub-models, some of which with already demonstrated accuracy, which simulated the IC interfacing behavior. Emphasis is given to the procedures that were developed to validate by means of laboratory measurements (and not by comparison with circuit-level simulations) the model performance, which is a novel and important aspect that should be considered in the design of IC models that are useful for SI analysi

    The inflated significance of neutral genetic diversity in conservation genetics

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    The current rate of species extinction is rapidly approaching unprecedented highs, and life on Earth presently faces a sixth mass extinction event driven by anthropogenic activity, climate change, and ecological collapse. The field of conservation genetics aims at preserving species by using their levels of genetic diversity, usually measured as neutral genome-wide diversity, as a barometer for evaluating population health and extinction risk. A fundamental assumption is that higher levels of genetic diversity lead to an increase in fitness and long-term survival of a species. Here, we argue against the perceived importance of neutral genetic diversity for the conservation of wild populations and species. We demonstrate that no simple general relationship exists between neutral genetic diversity and the risk of species extinction. Instead, a better understanding of the properties of functional genetic diversity, demographic history, and ecological relationships is necessary for developing and implementing effective conservation genetic strategies.João C. Teixeira and Christian D. Hube

    Primary Melanoma Of The Uterine Cervix Figo Stage Iii B.

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    The primary malignant melanoma of the uterine cervix is rare, usually diagnosed at an advanced stage and with poor prognosis. The diagnosis is made through histological evaluation and confirmed by special staining procedures. Radical surgery has been used and advocated. However in its advanced stages chemotherapy, immunotherapy or radiotherapy can be employed. A case of a patient with malignant melanoma of the uterine cervix, Stage IIIb, is presented in addition to a clinical and pathological discussion.11641778178

    Nematodes vs Macrofauna assemblages along an estuarine gradient (Mondego estuary, Portugal)

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    The spatial distribution of the nematodes and macrofauna communities in the subtidal sediments along estuarine gradient in the Mondego estuary was studied. The main aim is to compare the response of the nematodes and macrofauna communities structure adjusted for each estuarine stretch. Spatial distribution of nematode assemblages followed the estuarine gradients, allowing to distinguish: The freshwater and oligohaline sections, characterised by the presence of freshwater nematodes, low densities and diversity; Mesohaline section, the densities and diversity were also low; Polyhaline and Euhaline sections, attained highest densities and diversity. Significant differences of diversity were obtained between estuarine sections by Shannon-Wiener index. Significant differences in macrofauna densities were also obtained, the highest values were obtained in euhaline and mesohaline areas. The euhaline stations presented higher species richness, while the freshwater section registered lower values. Significant differences of diversity were also obtained between estuarine sections by Shannon-Wiener index. From the management point of view both communities are very useful in assessing ecological quality in transitional waters, however the rapid response of nematodes to environmental changes became an important tool

    How far ‘AUG-proximity effect’ goes?

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    Nonsense-mediated mRNA decay (NMD) is a surveillance pathway that recognizes and selectively degrades mRNAs carrying premature termination codons (PTCs). We have previously shown that mRNAs carrying a PTC located in close proximity to the translation initiation AUG codon escape NMD. This was called the “AUG-proximity effect”. The present work illustrates that the extension of the AUG-proximity effect, i.e. to what position in the open reading frame (ORF) an AUG-proximal PTC does not trigger NMD, is different between human a- and b-globin mRNAs. Remarkably, our data also demonstrate that, contrary to what occurs in the b-globin transcripts, a-globin mRNAs carrying an AUG-proximal PTC allow for efficient translation re-initiation, although it only partially explains their NMD resistance. In addition, our results reveal that in the a- and b-globin transcripts, the extension of the AUG-proximity effect is determined by the ORF sequence. Furthermore, we show how the mRNA secondary structure, which is affected by the ORF sequence, determines the AUG-proximity effect extension. Our data point out that the time taken to translate the short ORF, affected by its sequence and stability, besides being involved in modulating translation re-initiation, also plays an important role in establishing the extension of the AUG-proximity effect

    Bone Mineral Density in Healthy Female Adolescents According to Age, Bone Age and Pubertal Breast Stage

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    This study was designed to evaluate bone mineral density (BMD) in healthy female Brazilian adolescents in five groups looking at chronological age, bone age, and pubertal breast stage, and determining BMD behavior for each classification. Seventy-two healthy female adolescents aged between 10 to 20 incomplete years were divided into five groups and evaluated for calcium intake, weight, height, body mass index (BMI), pubertal breast stage, bone age, and BMD. Bone mass was measured by bone densitometry (DXA) in lumbar spine and proximal femur regions, and the total body. BMI was estimated by Quetelet index. Breast development was assessed by Tanner's criteria and skeletal maturity by bone age. BMD comparison according to chronologic and bone age, and breast development were analyzed by Anova, with Scheffe's test used to find significant differences between groups at P≤0.05. BMD (g·cm(-2)) increased in all studied regions as age advanced, indicating differences from the ages of 13 to 14 years. This group differed to the 10 and 11 to 12 years old groups for lumbar spine BMD (0.865±0.127 vs 0.672±0.082 and 0.689±0.083, respectively) and in girls at pubertal development stage B3, lumbar spine BMD differed from B5 (0.709±0.073 vs 0.936±0.130) and whole body BMD differed from B4 and B5 (0.867±0.056 vs 0.977±0.086 and 1.040±0.080, respectively). Bone mineralization increased in the B3 breast maturity group, and the critical years for bone mass acquisition were between 13 and 14 years of age for all sites evaluated by densitometry

    The immunogenetic impact of European colonization in the Americas

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    PUBLISHED 05 August 2022The introduction of pathogens originating from Eurasia into the Americas during early European contact has been associated with high mortality rates among Indigenous peoples, likely contributing to their historical and precipitous population decline. However, the biological impacts of imported infectious diseases and resulting epidemics, especially in terms of pathogenic effects on the Indigenous immunity, remain poorly understood and highly contentious to this day. Here, we examine multidisciplinary evidence underpinning colonization-related immune genetic change, providing contextualization from anthropological studies, paleomicrobiological evidence of contrasting host-pathogen coevolutionary histories, and the timings of disease emergence. We further summarize current studies examining genetic signals reflecting post-contact Indigenous population bottlenecks, admixture with European and other populations, and the putative effects of natural selection, with a focus on ancient DNA studies and immunity-related findings. Considering current genetic evidence, together with a population genetics theoretical approach, we show that post-contact Indigenous immune adaptation, possibly influenced by selection exerted by introduced pathogens, is highly complex and likely to be affected by multifactorial causes. Disentangling putative adaptive signals from those of genetic drift thus remains a significant challenge, highlighting the need for the implementation of population genetic approaches that model the short time spans and complex demographic histories under consideration. This review adds to current understandings of post-contact immunity evolution in Indigenous peoples of America, with important implications for bettering our understanding of human adaptation in the face of emerging infectious diseases.Evelyn Jane Collen, Angad Singh Johar, João C. Teixeira and Bastien Llama

    Nonlinear force-free magnetic field extrapolations: comparison of the Grad-Rubin and Wheatland-Sturrock-Roumeliotis algorithm

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    We compare the performance of two alternative algorithms which aim to construct a force-free magnetic field given suitable boundary conditions. For this comparison, we have implemented both algorithms on the same finite element grid which uses Whitney forms to describe the fields within the grid cells. The additional use of conjugate gradient and multigrid iterations result in quite effective codes. The Grad-Rubin and Wheatland-Sturrock-Roumeliotis algorithms both perform well for the reconstruction of a known analytic force-free field. For more arbitrary boundary conditions the Wheatland-Sturrock-Roumeliotis approach has some difficulties because it requires overdetermined boundary information which may include inconsistencies. The Grad-Rubin code on the other hand loses convergence for strong current densities. For the example we have investigated, however, the maximum possible current density seems to be not far from the limit beyond which a force free field cannot exist anymore for a given normal magnetic field intensity on the boundary.Comment: 21 pages, 13 figure

    Composition Of ω-3 And ω-6 Fatty Acids In Freeze-dried Chicken Embryo Eggs With Different Days Of Development

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    Fatty acids ω-3 and ω-6 composition and specially DHA were determined in freeze-dried chicken embryo eggs with pre-determined incubation periods. Fertile and embryo eggs presented palmitic (23.18 ± 0.54%), stearic (7.70 ± 0.28%), palmitoleic (3.00 ± 0.19%), oleic (36.28 ± 0.58%), linoleic (22.18 ± 0.34%), linolenic (1.08 ± 0.04%), arachidonic (2.04 ± 0.03%), docosahexaenoic (0.91 ± 0.03%), total ω-3 acids (2.26 ± 0.10%) and total ω-6 acids (24.62 ± 0.33%). There were no significant differences in total contents of ω-3 fatty acids (p=0.1226) between freeze-dried chicken embryo eggs with different incubation periods (3, 5, 7, 9, and 11 days) and fertile freeze-dried chicken eggs (day 0). However, there were significant differences in total medium contents of ω-6 fatty acids (P=0.001). There was also a strong statistical evidence that quadratic model was related with expected values of DHA content (p= 0.0013).472219224Abril, R., Barclay, B., Fatty acid analysis of poultry eggs as methyl esters (1999) Método OT-GCPE, Rev. 3.1, , OmegaTech. Bolder, Co. 24/03/99(1996) Official Methods and Recommended Practices of de American Oil Chemists' Society. 4th Ed., , American Oil Chemists' Society, Champaign IIBragagnolo, N., Turatti, J.M., Evaluation of "light" eggs in Brazil (1999) Associazione Italiana di Avicoltura Scientifica, Instituto di Zootecnia, 2, pp. 177-181. , Paper presented at VIII European Symposium on the Quality of Eggs and Eggs Products, Bologna, ItáliaBeig, D., Garcia, F.C.M., (1986) O Embrião de Galinha, , Campo Grande : UFMS/ Imprensa UniversitáriaCherian, G., Sim, J.S., Net transfer and incorporation of yolk n-3 fatty acids into developing chick embryos (1993) Poultry Science, 72, pp. 98-105Cherian, G., Gopalakrishnan, N., Akiba, Y., Sim, J.S., Effect of maternal dietary n-3 fatty acids on the accretion of long-chain polyunsaturated fatty acids in the tissues of developing chick embryo (1997) Biology of Neonate, 72, pp. 165-174Connor, W.E., Importance of n-3 fatty acids in health and disease (2000) American Journal of Clinical Nutritional, 71 (SUPPL.), pp. 171S-175SFarkas, K., Noble, R.C., Speake, B.K., Development changes in the levels of molecular species of triacylglicerol that contain docosahexaenoic acid in adipose tissue of chick embryo (1996) Comparative Biochemistry and Physiology B-Biochemistry and Molecular Biology, 115, pp. 1-6Ferrier, L.K., Gaston, L.J., Leeson, S., Squires, J., Weaver, B.J., Holub, B.J., α-linolenic acid - and docosahexaenoic acid - enriched eggs from hens fed flaxseed: Influence on blood lipids and platelet phospholipid fatty acids in human (1995) The American Journal of Clinical Nutrition, 62, pp. 81-86Lin, D.S., Connor, W.E., Anderson, G.J., The incorporation of n-3 and n-6 essential fatty acids into chicken embryo from eggs yolks having vastly different fatty acid compositions (1991) Pediatric Research, 29, pp. 601-605Maldjian, A., Falkas, K., Noble, R.C., Cocchi, M., Speake, B.K., The transfer of docosahexaenoic acid from the yolk to the tissues of chicken embryo (1995) Biochimica et Biophysica Acta, 1258, pp. 81-99Nettleton, J.A., (1995) Omega-3 Fatty Acids and Health, , Chapman and Hall, New YorkNoble, R.C., Cocchi, M., Lipid metabolism and the neonatal chicken (1990) Prog. Lipid Res., 29, pp. 107-140Park, Y.K., Koo, M.H., Carvalho, P.O., Recentes Progresses dos Alimentos Funcionais (1997) Bol. SBCTA, 31Salatin, J., Pastured poultry profits (1993) Polyface Swoope, , VirginiaSpeake, B.K., Murray, A.M.B., Noble, R.C., Transport and transformations of yolk lipids during development of avian embryo (1998) Prog. Lipid Res., 37, pp. 1-32Stadelman, W.J., Pratt, D.E., Factors influencing composition the hen's egg (1989) World's Poultry Science Journal, 45, pp. 247-261Thapon, J.L., Bourgeois, C.M., L'oeuf et les ovoproduits (1994) Lavoisier -Technique et Documentation, , ParisVieira, S., Hoffmann, R., Estatísitica experimental (1989) Atlas, , São Paul
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