59,293 research outputs found
A boundary element regularised Stokeslet method applied to cilia and flagella-driven flow
A boundary element implementation of the regularised Stokeslet method of
Cortez is applied to cilia and flagella-driven flows in biology.
Previously-published approaches implicitly combine the force discretisation and
the numerical quadrature used to evaluate boundary integrals. By contrast, a
boundary element method can be implemented by discretising the force using
basis functions, and calculating integrals using accurate numerical or analytic
integration. This substantially weakens the coupling of the mesh size for the
force and the regularisation parameter, and greatly reduces the number of
degrees of freedom required. When modelling a cilium or flagellum as a
one-dimensional filament, the regularisation parameter can be considered a
proxy for the body radius, as opposed to being a parameter used to minimise
numerical errors. Modelling a patch of cilia, it is found that: (1) For a fixed
number of cilia, reducing cilia spacing reduces transport. (2) For fixed patch
dimension, increasing cilia number increases the transport, up to a plateau at
cilia. Modelling a choanoflagellate cell it is found that the
presence of a lorica structure significantly affects transport and flow outside
the lorica, but does not significantly alter the force experienced by the
flagellum.Comment: 20 pages, 7 figures, postprin
Swarm behavior of self-propelled rods and swimming flagella
Systems of self-propelled particles are known for their tendency to aggregate
and to display swarm behavior. We investigate two model systems, self-propelled
rods interacting via volume exclusion, and sinusoidally-beating flagella
embedded in a fluid with hydrodynamic interactions. In the flagella system,
beating frequencies are Gaussian distributed with a non-zero average. These
systems are studied by Brownian-dynamics simulations and by mesoscale
hydrodynamics simulations, respectively. The clustering behavior is analyzed as
the particle density and the environmental or internal noise are varied. By
distinguishing three types of cluster-size probability density functions, we
obtain a phase diagram of different swarm behaviors. The properties of
clusters, such as their configuration, lifetime and average size are analyzed.
We find that the swarm behavior of the two systems, characterized by several
effective power laws, is very similar. However, a more careful analysis reveals
several differences. Clusters of self-propelled rods form due to partially
blocked forward motion, and are therefore typically wedge-shaped. At higher rod
density and low noise, a giant mobile cluster appears, in which most rods are
mostly oriented towards the center. In contrast, flagella become
hydrodynamically synchronized and attract each other; their clusters are
therefore more elongated. Furthermore, the lifetime of flagella clusters decays
more quickly with cluster size than of rod clusters
A quantum mechanical approach to establishing the magnetic field orientation from a maser Zeeman profile
Recent comparisons of magnetic field directions derived from maser Zeeman
splitting with those derived from continuum source rotation measures have
prompted new analysis of the propagation of the Zeeman split components, and
the inferred field orientation. In order to do this, we first review differing
electric field polarization conventions used in past studies. With these
clearly and consistently defined, we then show that for a given Zeeman
splitting spectrum, the magnetic field direction is fully determined and
predictable on theoretical grounds: when a magnetic field is oriented away from
the observer, the left-hand circular polarization is observed at higher
frequency and the right-hand polarization at lower frequency. This is
consistent with classical Lorentzian derivations. The consequent interpretation
of recent measurements then raises the possibility of a reversal between the
large-scale field (traced by rotation measures) and the small-scale field
(traced by maser Zeeman splitting).Comment: 10 pages, 5 Figures, accepted for publication in MNRA
Gravitational instantons and internal dimensions
We Study instanton solutions in general relativity with a scalar field. The
metric ansatz we use is composed of a particular warp product of general
Einstein metrics, such as those found in a number of cosmological settings,
including string cosmology, supergravity compactifications and general Kaluza
Klein reductions. Using the Hartle-Hawking prescription the instantons we
obtain determine whether metrics involving extra compact dimensions of this
type are favoured as initial conditions for the universe. Specifically, we find
that these product metric instantons, viewed as constrained instantons, do have
a local minima in the action. These minima are then compared with the higher
dimensional version of the Hawking-Turok instantons, and we argue that the
latter always have lower action than those associated with these product
metrics.Comment: 10 pages, 5 figure
Maser Flare Simulations from Oblate and Prolate Clouds
We investigated, through numerical models, the flaring variability that may
arise from the rotation of maser clouds of approximately spheroidal geometry,
ranging from strongly oblate to strongly prolate examples. Inversion solutions
were obtained for each of these examples over a range of saturation levels from
unsaturated to highly saturated. Formal solutions were computed for rotating
clouds with many randomly chosen rotation axes, and corresponding averaged
maser light curves plotted with statistical information. The dependence of
results on the level of saturation and on the degree of deformation from the
spherical case were investigated in terms of a variability index and duty
cycle. It may be possible to distinguish observationally between flares from
oblate and prolate objects. Maser flares from rotation are limited to long
timescales (at least a few years) and modest values of the variability index
(), and can be aperiodic or quasi-periodic. Rotation is therefore
not a good model for HO variability on timescales of weeks to months, or of
truly periodic flares.Comment: 11 pages, 12 figures, accepted for publication in MNRA
Fluid-Induced Propulsion of Rigid Particles in Wormlike Micellar Solutions
In the absence of inertia, a reciprocal swimmer achieves no net motion in a
viscous Newtonian fluid. Here, we investigate the ability of a reciprocally
actuated particle to translate through a complex fluid that possesses a network
using tracking methods and birefringence imaging. A geometrically polar
particle, a rod with a bead on one end, is reciprocally rotated using magnetic
fields. The particle is immersed in a wormlike micellar (WLM) solution that is
known to be susceptible to the formation of shear bands and other localized
structures due to shear-induced remodeling of its microstructure. Results show
that the nonlinearities present in this WLM solution break time-reversal
symmetry under certain conditions, and enable propulsion of an artificial
"swimmer." We find three regimes dependent on the Deborah number (De): net
motion towards the bead-end of the particle at low De, net motion towards the
rod-end of the particle at intermediate De, and no appreciable propulsion at
high De. At low De, where the particle time-scale is longer then the fluid
relaxation time, we believe that propulsion is caused by an imbalance in the
fluid first normal stress differences between the two ends of the particle
(bead and rod). At De~1, however, we observe the emergence of a region of
network anisotropy near the rod using birefringence imaging. This anisotropy
suggests alignment of the micellar network, which is "locked in" due to the
shorter time-scale of the particle relative to the fluid
Strong latitudinal shear in the shallow convection zone of a rapidly rotating A-star
We have derived the mean broadening profile of the star V102 in the region of
the open cluster IC4665 from high resolution spectroscopy. At a projected
equatorial rotation velocity of vsini = (105 +- 12)km/s we find strong
deviation from classical rotation. We discuss several scenarios, the most
plausible being strong differential rotation in latitudinal direction. For this
scenario we find a difference in angular velocity of DeltaOmega = 3.6 +- 0.8
rad/d (DeltaOmega/Omega = 0.42 +- 0.09). From the Halpha line we derive a
spectral type of A9 and support photometric measurements classifying IC4665
V102 as a non-member of IC4665. At such early spectral type this is the
strongest case of differential rotation observed so far. Together with three
similar stars, IC4665 V102 seems to form a new class of objects that exhibit
extreme latitudinal shear in a very shallow convective envelope.Comment: accepted for A&A Letter
Continuous breakdown of Purcell's scallop theorem with inertia
Purcell's scallop theorem defines the type of motions of a solid body -
reciprocal motions - which cannot propel the body in a viscous fluid with zero
Reynolds number. For example, the flapping of a wing is reciprocal and, as was
recently shown, can lead to directed motion only if its frequency Reynolds
number, Re_f, is above a critical value of order one. Using elementary
examples, we show the existence of oscillatory reciprocal motions which are
effective for all arbitrarily small values of the frequency Reynolds number and
induce net velocities scaling as (Re_f)^\alpha (alpha > 0). This demonstrates a
continuous breakdown of the scallop theorem with inertia.Comment: 6 pages, 1 figur
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