2,250 research outputs found

    Light dark forces at flavor factories

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    SuperB experiment could represent an ideal environment to test a new U (1) symmetry related to light dark forces candidates. A promising discovery channel is represented by the resonant production of a boson U, followed by its decay into lepton pairs. Beyond approximations adopted in the literature, an exact tree level calculation of the radiative processes e+e−→γ,U→Ό+ÎŒâˆ’Îł,e+e−γe+ e- \rightarrow \gamma, U \rightarrow \mu^+ \mu^- \gamma, e^+ e^- \gamma and corresponding QED backgrounds is performed, including also the most important higher-order corrections. The calculation is implemented in a release of the generator BabaYaga@NLO useful for data analysis and interpretation. The distinct features of U boson production are shown and the statistical significance is analysed

    Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research

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    This research was carried out within the framework of the DREAM Community of Premature Births, of which UDC researchers Diego FernĂĄndez-Edreira and Carlos FernĂĄndez-Lozano, who have collaborated in the research, are members.Supplementary research data are available at https://www.cell.com/cms/10.1016/j.xcrm.2023.101350/attachment/e44bcada-f500-4f17-bc33-0ee5d39b3c4b/mmc1.pdf.[Abstract]: Every year, 11% of infants are born preterm with significant health consequences, with the vaginal microbiome a risk factor for preterm birth. We crowdsource models to predict (1) preterm birth (PTB; <37 weeks) or (2) early preterm birth (ePTB; <32 weeks) from 9 vaginal microbiome studies representing 3,578 samples from 1,268 pregnant individuals, aggregated from public raw data via phylogenetic harmonization. The predictive models are validated on two independent unpublished datasets representing 331 samples from 148 pregnant individuals. The top-performing models (among 148 and 121 submissions from 318 teams) achieve area under the receiver operator characteristic (AUROC) curve scores of 0.69 and 0.87 predicting PTB and ePTB, respectively. Alpha diversity, VALENCIA community state types, and composition are important features in the top-performing models, most of which are tree-based methods. This work is a model for translation of microbiome data into clinically relevant predictive models and to better understand preterm birth.We thank members of the Sirota Lab, University of California, San Francisco, for useful discussion. This study was supported by the March of Dimes (J.L.G., T.T.O., A.R., A.S.T., V.C., C.W.Y.H., R.J.W., K.J.F., G.A., I.K., J.B., A.N., J.G., Z.W., P.N., A.K., I.B., E.K., S.J., S.N., Y.S.L., P.R.B., D.A.M., S.V.L., J.A., D.K.S., N.Aghaeepour, J.C.C., M.S.) and R35GM138353 (N.Aghaeepour), 1R01HL139844 (N.Aghaeepour), 3P30AG066515 (N.Aghaeepour), 1R61NS114926 (N.Aghaeepour), 1R01AG058417 (N.Aghaeepour), R01HD105256 (N.Aghaeepour, M.S.), P01HD106414 (N.Aghaeepour), R01GM140464 (J.G., Z.W., G.C., Z.-Z.T.), NSF DMS-2054346 (J.G., Z.W., G.C., Z.-Z.T.); the Burroughs Welcome Fund (N.Aghaeepour); the Alfred E. Mann Foundation (N.Aghaeepour); and the Robertson Foundation (N.Aghaeepour). A.P.-L. and P.D.-G. are receiving honoraria from the IVI Foundation.United States. National Institute of General Medical Sciences; R35GM138353United States. National Institutes of Health; 1R01HL139844United States. National Institutes of Health; 3P30AG066515United States. National Institutes of Health; 1R61NS114926United States. National Institute on Aging; 1R01AG058417United States. National Institute of Child Health and Human Development; R01HD105256United States. National Institute of Child Health and Human Development; P01HD106414United States. National Institutes of Health; R01GM140464United States. National Science Foundation; DMS-205434

    Incorporation of Eye-Tracking and Gaze Feedback to Characterize and Improve Radiologist Search Patterns of Chest X-rays: A Randomized Controlled Clinical Trial

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    Diagnostic errors in radiology often occur due to incomplete visual assessments by radiologists, despite their knowledge of predicting disease classes. This insufficiency is possibly linked to the absence of required training in search patterns. Additionally, radiologists lack consistent feedback on their visual search patterns, relying on ad-hoc strategies and peer input to minimize errors and enhance efficiency, leading to suboptimal patterns and potential false negatives. This study aimed to use eye-tracking technology to analyze radiologist search patterns, quantify performance using established metrics, and assess the impact of an automated feedback-driven educational framework on detection accuracy. Ten residents participated in a controlled trial focused on detecting suspicious pulmonary nodules. They were divided into an intervention group (received automated feedback) and a control group. Results showed that the intervention group exhibited a 38.89% absolute improvement in detecting suspicious-for-cancer nodules, surpassing the control group's improvement (5.56%, p-value=0.006). Improvement was more rapid over the four training sessions (p-value=0.0001). However, other metrics such as speed, search pattern heterogeneity, distractions, and coverage did not show significant changes. In conclusion, implementing an automated feedback-driven educational framework improved radiologist accuracy in detecting suspicious nodules. The study underscores the potential of such systems in enhancing diagnostic performance and reducing errors. Further research and broader implementation are needed to consolidate these promising results and develop effective training strategies for radiologists, ultimately benefiting patient outcomes.Comment: Submitted for Review in the Journal of the American College of Radiology (JACR

    Usefulness of event-related potentials in the assessment of mild cognitive impairment

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    <p>Abstract</p> <p>Background</p> <p>The aim of this study was to determine if changes in latencies and amplitudes of the major waves of Auditory Event-Related Potentials (AERP), correlate with memory status of patients with mild cognitive impairment (MCI) and conversion to Alzheimer's disease (AD).</p> <p>91 patients with MCI (mean ± SD age = 66.6 ± 5.4, MMSE score = 27.7) and 30 age-matched healthy control (AMHC) subjects (mean ± SD age = 68.9 ± 9.9) were studied. 54 patients were re-examined after an average period of 14(± 5.2) months. During this time period 5 patients converted to AD. Between-group differences in latency and amplitude of the major AERP waves (N200, P300 and Slow Wave) were determined. Within each group, correlation coefficients (CC) between these characteristics of the different AERP waves were calculated. Finally, for patients, CCs were determined among each AERP wave and their age and MMSE scores. Confirmatory factor analysis (CFA) was used to examine the underlying structure of waveforms both in the control and the patient groups.</p> <p>Results</p> <p>Latencies of all major AERP components were prolonged in patients compared to controls. Patients presented with significantly higher N200 amplitudes, but no significant differences were observed in P300 amplitudes. Significant differences between follow-up and baseline measurements were found for P300 latency (p = 0.009), N200 amplitude (p < 0.001) and P300 amplitude (p = 0.05). MMSE scores of patients did not correlate with latency or amplitude of the AERP components. Moreover, the establishment of a N200 latency cut-off value of 287 ms resulted in a sensitivity of 100% and a specificity of 91% in the prediction of MCI patients that converted to AD.</p> <p>Conclusion</p> <p>Although we were not able to establish significant correlations between latencies and amplitudes of N200, P300 and SW and the patients' performance in MMSE, which is a psychometric test for classifying patients suffering from MCI, our results point out that the disorganization of the AERP waveform in MCI patients is a potential basis upon which a neurophysiologic methodology for identifying and "staging" MCI can be sought. We also found that delayed N200 latency not only identifies memory changes better than the MMSE, but also may be a potential predictor of the MCI patients who convert to AD.</p

    On the Lack of Correlation Between [OIII]/[OII] and Lyman-Continuum Escape Fraction

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    We present the first results of our pilot study of 8 photometrically selected Lyman continuum (LyC) emitting galaxy candidates from the COSMOS field and focus on their optical emission line ratios. Observations were performed in the H and K bands using the Multi-Object Spectrometer for Infra-Red Exploration (MOSFIRE) instrument at the Keck Observatory, targeting the [OII], HÎČ\beta, and [OIII] emission lines. We find that photometrically selected LyC emitting galaxy candidates have high ionization parameters, based on their high [OIII]/[OII] ratios (O32), with an average ratio for our sample of 2.5±\pm0.2. Preliminary results of our companion Low Resolution Imaging Spectrometer (LRIS) observations, targeting LyC and Lyα\alpha, show that those galaxies with the largest O32 are typically found to also be Lyα\alpha emitters. High O32 galaxies are also found to have tentative non-zero LyC escape fractions (fesc(LyC)f_{esc}(LyC)) based on uu band photometric detections. These results are consistent with samples of highly ionized galaxies, including confirmed LyC emitting galaxies from the literature. We also perform a detailed comparison between the observed emission line ratios and simulated line ratios from density bounded HII_{\textrm{II}} regions modeled using the photoionization code MAPPINGS V. Estimates of fesc(LyC)f_{esc}(LyC) for our sample fall in the range from 0.0-0.23 and suggest possible tension with published correlations between O32 and fesc(LyC)f_{esc}(LyC), adding weight to dichotomy of arguments in the literature. We highlight the possible effects of clumpy geometry and mergers that may account for such tension.Comment: 21 pages, 11 figures, 3 tables, accepted for publication in MNRA

    A comparative framework: how broadly applicable is a 'rigorous' critical junctures framework?

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    The paper tests Hogan and Doyle's (2007, 2008) framework for examining critical junctures. This framework sought to incorporate the concept of ideational change in understanding critical junctures. Until its development, frameworks utilized in identifying critical junctures were subjective, seeking only to identify crisis, and subsequent policy changes, arguing that one invariably led to the other, as both occurred around the same time. Hogan and Doyle (2007, 2008) hypothesized ideational change as an intermediating variable in their framework, determining if, and when, a crisis leads to radical policy change. Here we test this framework on cases similar to, but different from, those employed in developing the exemplar. This will enable us determine whether the framework's relegation of ideational change to a condition of crisis holds, or, if ideational change has more importance than is ascribed to it by this framework. This will also enable us determined if the framework itself is robust, and fit for the purposes it was designed to perform — identifying the nature of policy change

    Averages of bb-hadron, cc-hadron, and τ\tau-lepton properties as of summer 2014

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    This article reports world averages of measurements of bb-hadron, cc-hadron, and τ\tau-lepton properties obtained by the Heavy Flavor Averaging Group (HFAG) using results available through summer 2014. For the averaging, common input parameters used in the various analyses are adjusted (rescaled) to common values, and known correlations are taken into account. The averages include branching fractions, lifetimes, neutral meson mixing parameters, CPCP violation parameters, parameters of semileptonic decays and CKM matrix elements.Comment: 436 pages, many figures and tables. Online updates available at http://www.slac.stanford.edu/xorg/hfag

    The long non-coding {RNA} {H19} suppresses carcinogenesis and chemoresistance in hepatocellular carcinoma

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    The long non-coding RNA (lncRNA) H19 represents a maternally expressed and epigenetically regulated imprinted gene product and is discussed to have either tumor-promoting or tumor-suppressive actions. Recently, H19 was shown to be regulated under inflammatory conditions. Therefore, aim of this study was to determine the function of H19 in hepatocellular carcinoma (HCC), an inflammation-associated type of tumor. In four different human HCC patient cohorts H19 was distinctly downregulated in tumor tissue compared to normal or non-tumorous adjacent tissue. We therefore determined the action of H19 in three different human hepatoma cell lines (HepG2, Plc/Prf5, and Huh7). Clonogenicity and proliferation assays showed that H19 overexpression could suppress tumor cell survival and proliferation after treatment with either sorafenib or doxorubicin, suggesting chemosensitizing actions of H19. Since HCC displays a highly chemoresistant tumor entity, cell lines resistant to doxorubicin or sorafenib were established. In all six chemoresistant cell lines H19 expression was significantly downregulated. The promoter methylation of the H19 gene was significantly different in chemoresistant cell lines compared to their sensitive counterparts. Chemoresistant cells were sensitized after H19 overexpression by either increasing the cytotoxic action of doxorubicin or decreasing cell proliferation upon sorafenib treatment. An H19 knockout mouse model (H19Δ3) showed increased tumor development and tumor cell proliferation after treatment with the carcinogen diethylnitrosamine (DEN) independent of the reciprocally imprinted insulin-like growth factor 2 (IGF2). In conclusion, H19 suppresses hepatocarcinogenesis, hepatoma cell growth, and HCC chemoresistance. Thus, mimicking H19 action might be a potential target to overcome chemoresistance in future HCC therapy
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