826 research outputs found
Formation of antiwaves in gap-junction-coupled chains of neurons
Using network models consisting of gap junction coupled Wang-Buszaki neurons,
we demonstrate that it is possible to obtain not only synchronous activity
between neurons but also a variety of constant phase shifts between 0 and \pi.
We call these phase shifts intermediate stable phaselocked states. These phase
shifts can produce a large variety of wave-like activity patterns in
one-dimensional chains and two-dimensional arrays of neurons, which can be
studied by reducing the system of equations to a phase model. The 2\pi periodic
coupling functions of these models are characterized by prominent higher order
terms in their Fourier expansion, which can be varied by changing model
parameters. We study how the relative contribution of the odd and even terms
affect what solutions are possible, the basin of attraction of those solutions
and their stability. These models may be applicable to the spinal central
pattern generators of the dogfish and also to the developing neocortex of the
neonatal rat
Stochastic Representations of Ion Channel Kinetics and Exact Stochastic Simulation of Neuronal Dynamics
In this paper we provide two representations for stochastic ion channel
kinetics, and compare the performance of exact simulation with a commonly used
numerical approximation strategy. The first representation we present is a
random time change representation, popularized by Thomas Kurtz, with the second
being analogous to a "Gillespie" representation. Exact stochastic algorithms
are provided for the different representations, which are preferable to either
(a) fixed time step or (b) piecewise constant propensity algorithms, which
still appear in the literature. As examples, we provide versions of the exact
algorithms for the Morris-Lecar conductance based model, and detail the error
induced, both in a weak and a strong sense, by the use of approximate
algorithms on this model. We include ready-to-use implementations of the random
time change algorithm in both XPP and Matlab. Finally, through the
consideration of parametric sensitivity analysis, we show how the
representations presented here are useful in the development of further
computational methods. The general representations and simulation strategies
provided here are known in other parts of the sciences, but less so in the
present setting.Comment: 39 pages, 6 figures, appendix with XPP and Matlab cod
Phase Response Curves of Coupled Oscillators
Many real oscillators are coupled to other oscillators and the coupling can
affect the response of the oscillators to stimuli. We investigate phase
response curves (PRCs) of coupled oscillators. The PRCs for two weakly coupled
phase-locked oscillators are analytically obtained in terms of the PRC for
uncoupled oscillators and the coupling function of the system. Through
simulation and analytic methods, the PRCs for globally coupled oscillators are
also discussed.Comment: 5 pages 4 figur
Chimera States for Coupled Oscillators
Arrays of identical oscillators can display a remarkable spatiotemporal
pattern in which phase-locked oscillators coexist with drifting ones.
Discovered two years ago, such "chimera states" are believed to be impossible
for locally or globally coupled systems; they are peculiar to the intermediate
case of nonlocal coupling. Here we present an exact solution for this state,
for a ring of phase oscillators coupled by a cosine kernel. We show that the
stable chimera state bifurcates from a spatially modulated drift state, and
dies in a saddle-node bifurcation with an unstable chimera.Comment: 4 pages, 4 figure
Limits and dynamics of stochastic neuronal networks with random heterogeneous delays
Realistic networks display heterogeneous transmission delays. We analyze here
the limits of large stochastic multi-populations networks with stochastic
coupling and random interconnection delays. We show that depending on the
nature of the delays distributions, a quenched or averaged propagation of chaos
takes place in these networks, and that the network equations converge towards
a delayed McKean-Vlasov equation with distributed delays. Our approach is
mostly fitted to neuroscience applications. We instantiate in particular a
classical neuronal model, the Wilson and Cowan system, and show that the
obtained limit equations have Gaussian solutions whose mean and standard
deviation satisfy a closed set of coupled delay differential equations in which
the distribution of delays and the noise levels appear as parameters. This
allows to uncover precisely the effects of noise, delays and coupling on the
dynamics of such heterogeneous networks, in particular their role in the
emergence of synchronized oscillations. We show in several examples that not
only the averaged delay, but also the dispersion, govern the dynamics of such
networks.Comment: Corrected misprint (useless stopping time) in proof of Lemma 1 and
clarified a regularity hypothesis (remark 1
Clustered chimera states in delay coupled oscillator systems
We investigate "chimera" states in a ring of identical phase oscillators
coupled in a time-delayed and spatially non-local fashion. We find novel
"clustered chimera" states that have spatially distributed phase coherence
separated by incoherence with adjacent coherent regions in anti-phase. The
existence of such time-delay induced phase clustering is further supported
through solutions of a generalized functional self-consistency equation of the
mean field. Our results highlight an additional mechanism for cluster formation
that may find wider practical applications
Effective phase description of noise-perturbed and noise-induced oscillations
An effective description of a general class of stochastic phase oscillators
is presented. For this, the effective phase velocity is defined either by
invariant probability density or via first passage times. While the first
approach exhibits correct frequency and distribution density, the second one
yields proper phase resetting curves. Their discrepancy is most pronounced for
noise-induced oscillations and is related to non-monotonicity of the phase
fluctuations
New dynamics in cerebellar Purkinje cells: torus canards
We describe a transition from bursting to rapid spiking in a reduced
mathematical model of a cerebellar Purkinje cell. We perform a slow-fast
analysis of the system and find that -- after a saddle node bifurcation of
limit cycles -- the full model dynamics follow temporarily a repelling branch
of limit cycles. We propose that the system exhibits a dynamical phenomenon new
to realistic, biophysical applications: torus canards.Comment: 4 pages; 4 figures (low resolution); updated following peer-review:
language and definitions updated, Figures 1 and 4 updated, typos corrected,
references added and remove
Mathematical Analysis and Simulations of the Neural Circuit for Locomotion in Lamprey
We analyze the dynamics of the neural circuit of the lamprey central pattern
generator (CPG). This analysis provides insights into how neural interactions
form oscillators and enable spontaneous oscillations in a network of damped
oscillators, which were not apparent in previous simulations or abstract phase
oscillator models. We also show how the different behaviour regimes
(characterized by phase and amplitude relationships between oscillators) of
forward/backward swimming, and turning, can be controlled using the neural
connection strengths and external inputs.Comment: 4 pages, accepted for publication in Physical Review Letter
Finite-size and correlation-induced effects in Mean-field Dynamics
The brain's activity is characterized by the interaction of a very large
number of neurons that are strongly affected by noise. However, signals often
arise at macroscopic scales integrating the effect of many neurons into a
reliable pattern of activity. In order to study such large neuronal assemblies,
one is often led to derive mean-field limits summarizing the effect of the
interaction of a large number of neurons into an effective signal. Classical
mean-field approaches consider the evolution of a deterministic variable, the
mean activity, thus neglecting the stochastic nature of neural behavior. In
this article, we build upon two recent approaches that include correlations and
higher order moments in mean-field equations, and study how these stochastic
effects influence the solutions of the mean-field equations, both in the limit
of an infinite number of neurons and for large yet finite networks. We
introduce a new model, the infinite model, which arises from both equations by
a rescaling of the variables and, which is invertible for finite-size networks,
and hence, provides equivalent equations to those previously derived models.
The study of this model allows us to understand qualitative behavior of such
large-scale networks. We show that, though the solutions of the deterministic
mean-field equation constitute uncorrelated solutions of the new mean-field
equations, the stability properties of limit cycles are modified by the
presence of correlations, and additional non-trivial behaviors including
periodic orbits appear when there were none in the mean field. The origin of
all these behaviors is then explored in finite-size networks where interesting
mesoscopic scale effects appear. This study leads us to show that the
infinite-size system appears as a singular limit of the network equations, and
for any finite network, the system will differ from the infinite system
- …