Non-specific interactions are sufficient to explain the position of heterochromatic chromocenters and nucleoli in interphase nuclei

The organization of the eukaryote nucleus into functional compartments arises by self-organization both through specific protein–protein and protein–DNA interactions and non-specific interactions that lead to entropic effects, such as e.g. depletion attraction. While many specific interactions have so far been demonstrated, the contributions of non-specific interactions are still unclear. We used coarse-grained molecular dynamics simulations of previously published models for Arabidopsis thaliana chromatin organization to show that non-specific interactions can explain the in vivo localization of nucleoli and chromocenters. Also, we quantitatively demonstrate that chromatin looping contributes to the formation of chromosome territories. Our results are consistent with the previously published Rosette model for Arabidopsis chromatin organization and suggest that chromocenter-associated loops play a role in suppressing chromocenter clustering

Biomineralization in perforate foraminifera

In this paper, we review the current understanding of biomineralization in perforate foraminifera. Ideas on the mechanisms responsible for the flux of Ca2 + and inorganic carbon from seawater into the test were originally based on light and electron microscopic observations of calcifying foraminifera. From the 1980s onward, tracer experiments, fluorescent microscopy and high-resolution test geochemical analysis have added to existing calcification models. Despite recent insights, no general consensus on the physiological basis of foraminiferal biomineralization exists. Current models include seawater vacuolization, transmembrane ion transport, involvement of organic matrices and/or pH regulation, although the magnitude of these controls remain to be quantified. Disagreement between currently available models may be caused by the use of different foraminiferal species as subject for biomineralization experiments and/or lack of a more systematic approach to study (dis)similarities between taxa. In order to understand foraminiferal controls on element incorporation and isotope fractionation, and thereby improve the value of foraminifera as paleoceanographic proxies, it is necessary to identify key processes in foraminiferal biomineralization and formulate hypotheses regarding the involved physiological pathways to provide directions for future research

Comparing stage of change and behavioral intention to understand fruit intake.

We explored if the pre-action Transtheoretical stages of change are indeed discrete stages for fruit intakes. In a longitudinal design, a cohort of 735 adults completed electronic questionnaires assessing fruit intake, stages of change and intention to increase fruit intake at baseline and 35 and 67 days follow-up. A dichotomization of a continuous intention measure ('pseudostages') was compared with precontemplation and contemplation stages. The results showed (i) that pseudostages and stages of change were strongly associated; (ii) that for most respondents, stability and transitions in stages of change resembled transitions in pseudostage, while test-retest reliabilities for both measures were similar and (iii) that pseudostages and the continuous intention measure were stronger predictors of fruit intake than stage of change. We conclude that pre-action stages of change for fruit are not different from a mere categorization of a continuous intention measure

1/f noise in patterned GMR spin valves

abstract onl

Effect of different seawater Mg²⁺ concentrations on calcification in two benthic foraminifers

Magnesium, incorporated in foraminiferal calcite (Mg/CaCC), is used intensively to reconstruct past seawater temperatures but, in addition to temperature, the Mg/CaCC of foraminiferal tests also depends on the ratio of Mg and Ca in seawater (Mg/CaSW). The physiological mechanisms responsible for these proxy relationships are still unknown. This culture study investigates the impact of different seawater [Mg2 +] on calcification in two benthic foraminiferal species precipitating contrasting Mg/CaCC: Ammonia aomoriensis, producing low-Mg calcite and Amphistegina lessonii, producing intermediate-Mg calcite. Foraminiferal growth and test thickness were determined and, Mg/Ca was analyzed using Laser Ablation-Inductively Coupled Plasma-Mass Spectrometry (LA-ICP-MS). Results show that at present-day seawater Mg/CaSW of ~ 5, both species have highest growth rates, reflecting their adaptation to modern seawater element concentrations. Test thickness is not significantly affected by different Mg/CaSW. The relationship between Mg/CaSW and Mg/CaCC shows a distinct positive y-axis intercept, possibly reflecting at least two processes involved in foraminiferal biomineralization. The associated Mg partition (DMg) changes non-linearly with increasing Mg/CaSW, hence suggesting that the DMg is best described by an exponential function approaching an asymptot

Salinity control on Na incorporation into calcite tests of the planktonic foraminifera Trilobatus sacculifer – Evidence from culture experiments and surface sediments

The quantitative reconstruction of past seawater salinity has yet to be achieved and the search for a direct and independent salinity proxy is ongoing. Recent culture and field studies show a significant positive correlation of Na/Ca with salinity in benthic and planktonic foraminiferal calcite. For accurate paleoceanographic reconstructions, consistent and reliable calibrations are necessary, which are still missing. In order to assess the reliability of foraminiferal Na/Ca as a direct proxy for seawater salinity, this study presents electron microprobe Na/Ca data, measured on cultured specimens of Trilobatus sacculifer. The culture experiments were conducted over a wide salinity range of 26 to 45, while temperature was kept constant. To further understand potential controlling factors of Na incorporation, measurements were also performed on foraminifera cultured at various temperatures in the range of 19.5 °C to 29.5 °C under constant salinity conditions. Foraminiferal Na/Ca ratios positively correlate with seawater salinity (Na/Caforam = 0.97 + 0.115 ⋅ Salinity, R = 0.97, p < 0.005). Temperature on the other hand exhibits no statistically significant relationship with Na/Ca ratios indicating salinity to be the dominant factor controlling Na incorporation. The culturing results are corroborated by measurements on T. sacculifer from Caribbean and Gulf of Guinea surface sediments. In conclusion, planktonic foraminiferal Na/Ca can be applied as a reliable proxy for reconstructing sea surface salinities, albeit species-specific calibrations might be necessary

The efficacy of social role models to increase motivation to obtain vaccination against hepatitis B among men who have sex with men

This study assessed the effects of role models in persuasive messages about risk and social norms to increase motivation to obtain hepatitis B virus (HBV) vaccination in men who have sex with men (MSM). MSM at risk for HBV in The Netherlands (N = 168) were recruited online via a range of websites and were randomly assigned to one of four conditions in a 2 (risk communication: yes and no) × 2 (social norms communication: yes and no) factorial design. In each condition, participants subsequently provided self-completed assessments of their perceived risk of HBV infection, perceived social norms regarding HBV vaccination and their intention to obtain vaccination against HBV. Risk communication and social norms communication that used social role models were effective in significantly increasing men's intention to obtain vaccination against HBV. No additive effect was found for a combined message. Mediation analyses showed that communications influenced intention via perceived risk and social norms. Findings extend previous theorizing and research and show that both role model-based risk communication and social norms communication can be effective in increasing intentions to obtain HBV vaccination in MSM. This knowledge contributes to the development of effective health promotion to increase HBV vaccination in MSM. © The Author 2010

Planktonic foraminiferal spine versus shell carbonate Na incorporation in relation to salinity

Sea surface salinity is one of the most important parameters to reconstruct in paleoclimatology, reflecting amongst other things the hydrological cycle, paleodensity, ice volume, and regional and global circulation of water masses. Recent culture studies and a Red Sea field study revealed a significant positive relation between salinity and Na incorporation within benthic and planktonic foraminiferal shells. However, these studies reported varying partitioning of Na between and within the same species. The latter could be associated with ontogenetic variations, most likely spine loss. Varying Na concentrations were observed in different parts of foraminiferal shells, with spines and regions close to the primary organic sheet being especially enriched in Na. In this study, we unravel the Na composition of different components of the planktonic foraminiferal shell wall using electron probe micro-analysis (EPMA) and solution ICP-MS. A model is presented to interpret EPMA data for spines and spine bases to quantitatively assess differences in composition and contribution to whole-shell Na∕Ca signals. The same model can also be applied to other spatial inhomogeneities observed in foraminiferal shell chemistry, like elemental (e.g., Mg, Na, S) banding and/or hotspots. The relative contribution of shell carbonate, organic linings, spines and spine bases to whole-shell Na chemistry is considered quantitatively. This study shows that whereas the high Na areas may be susceptible to taphonomic alterations, the Na chemistry of the shell itself seems relatively robust. Comparing both shell and spine Na∕Ca values with salinity shows that shell chemistry records salinity, albeit with a very modest slope.</p