776 research outputs found
Existence of Multistring Solutions of the Self-Gravitating Massive Boson
We consider a semilinear elliptic system which include the model system of
the strings in the cosmology as a special case. We prove existence of
multi-string solutions and obtain precise asymptotic decay estimates near
infinity for the solutions.
As a special case of this result we solve an open problem posed in
\cite{yan}Comment: 12 page
Development and Validation of a Method for Profiling Post-Translational Modification Activities Using Protein Microarrays
Background: Post-translational modifications (PTMs) impact on the stability, cellular location, and function of a protein thereby achieving a greater functional diversity of the proteome. To fully appreciate how PTMs modulate signaling networks, proteome-wide studies are necessary. However, the evaluation of PTMs on a proteome-wide scale has proven to be technically difficult. To facilitate these analyses we have developed a protein microarray-based assay that is capable of profiling PTM activities in complex biological mixtures such as whole-cell extracts and pathological specimens.Methodology/Principal Findings: In our assay, protein microarrays serve as a substrate platform for in vitro enzymatic reactions in which a recombinant ligase, or extracts prepared from whole cells or a pathological specimen is overlaid. The reactions include labeled modifiers (e. g., ubiquitin, SUMO1, or NEDD8), ATP regenerating system, and other required components (depending on the assay) that support the conjugation of the modifier. In this report, we apply this methodology to profile three molecularly complex PTMs (ubiquitylation, SUMOylation, and NEDDylation) using purified ligase enzymes and extracts prepared from cultured cell lines and pathological specimens. We further validate this approach by confirming the in vivo modification of several novel PTM substrates identified by our assay.Conclusions/Significance: This methodology offers several advantages over currently used PTM detection methods including ease of use, rapidity, scale, and sample source diversity. Furthermore, by allowing for the intrinsic enzymatic activities of cell populations or pathological states to be directly compared, this methodology could have widespread applications for the study of PTMs in human diseases and has the potential to be directly applied to most, if not all, basic PTM research
Dissociative recombination measurements of HCl+ using an ion storage ring
We have measured dissociative recombination of HCl+ with electrons using a
merged beams configuration at the heavy-ion storage ring TSR located at the Max
Planck Institute for Nuclear Physics in Heidelberg, Germany. We present the
measured absolute merged beams recombination rate coefficient for collision
energies from 0 to 4.5 eV. We have also developed a new method for deriving the
cross section from the measurements. Our approach does not suffer from
approximations made by previously used methods. The cross section was
transformed to a plasma rate coefficient for the electron temperature range
from T=10 to 5000 K. We show that the previously used HCl+ DR data
underestimate the plasma rate coefficient by a factor of 1.5 at T=10 K and
overestimate it by a factor of 3.0 at T=300 K. We also find that the new data
may partly explain existing discrepancies between observed abundances of
chlorine-bearing molecules and their astrochemical models.Comment: Accepted for publication in ApJ (July 7, 2013
Height estimates for Killing graphs
The paper aims at proving global height estimates for Killing graphs defined
over a complete manifold with nonempty boundary. To this end, we first point
out how the geometric analysis on a Killing graph is naturally related to a
weighted manifold structure, where the weight is defined in terms of the length
of the Killing vector field. According to this viewpoint, we introduce some
potential theory on weighted manifolds with boundary and we prove a weighted
volume estimate for intrinsic balls on the Killing graph. Finally, using these
tools, we provide the desired estimate for the weighted height in the
assumption that the Killing graph has constant weighted mean curvature and the
weighted geometry of the ambient space is suitably controlled.Comment: 26 pages. Final version. To appear on Journal of Geometric Analysi
Radiative rotational lifetimes and state-resolved relative detachment cross sections from photodetachment thermometry of molecular anions in a cryogenic storage ring
Photodetachment thermometry on a beam of OH in a cryogenic storage ring
cooled to below 10 K is carried out using two-dimensional, frequency and time
dependent photodetachment spectroscopy over 20 minutes of ion storage. In
equilibrium with the low-level blackbody field, we find an effective radiative
temperature near 15 K with about 90% of all ions in the rotational ground
state. We measure the J = 1 natural lifetime (about 193 s) and determine the
OH rotational transition dipole moment with 1.5% uncertainty. We also
measure rotationally dependent relative near-threshold photodetachment cross
sections for photodetachment thermometry.Comment: Manuscript LaTeX with 5 pages, 3 figures, and 1 table plus LaTeX
supplement with 12 pages, 3 figures and 3 tables. This article has been
accepted by Physical Review Letter
Disjoint minimal graphs
We prove that the number s(n) of disjoint minimal graphs supported on domains
in R^n is bounded by e(n+1)^2. In the two-dimensional case we show that s(2) is
at most three (the conjectured number is two).Comment: 14 page
PTEN and DNA-PK determine sensitivity and recovery in response to WEE1 inhibition in human breast cancer
Inhibition of WEE1 kinase by AZD1775 has shown promising results in clinical cancer trials, but markers predicting AZD1775 response are lacking. Here we analysed AZD1775 response in a panel of human breast cancer (BC) cell lines by global proteome/transcriptome profiling and identified two groups of basal-like BC (BLBCs): ‘PTEN low’ BLBCs were highly sensitive to AZD1775 and failed to recover following removal of AZD1775, while ‘PTEN high’ BLBCs recovered. AZD1775 induced phosphorylation of DNA-PK, protecting cells from replication-associated DNA damage and promoting cellular recovery. Deletion of DNA-PK or PTEN, or inhibition of DNA-PK sensitized recovering BLBCs to AZD1775 by abrogating replication arrest, allowing replication despite DNA damage. This was linked to reduced CHK1 activation, increased cyclin E levels and apoptosis. In conclusion, we identified PTEN and DNA-PK as essential regulators of replication checkpoint arrest in response to AZD1775 and defined PTEN as a promising biomarker for efficient WEE1 cancer therapy
Concomitant Carcinoma in situ in Cystectomy Specimens Is Not Associated with Clinical Outcomes after Surgery
Objective: The aim of this study was to externally validate the prognostic value of concomitant urothelial carcinoma in situ (CIS) in radical cystectomy (RC) specimens using a large international cohort of bladder cancer patients. Methods: The records of 3,973 patients treated with RC and bilateral lymphadenectomy for urothelial carcinoma of the bladder (UCB) at nine centers worldwide were reviewed. Surgical specimens were evaluated by a genitourinary pathologist at each center. Uni- and multivariable Cox regression models addressed time to recurrence and cancer-specific mortality after RC. Results: 1,741 (43.8%) patients had concomitant CIS in their RC specimens. Concomitant CIS was more common in organ-confined UCB and was associated with lymphovascular invasion (p < 0.001). Concomitant CIS was not associated with either disease recurrence or cancer-specific death regardless of pathologic stage. The presence of concomitant CIS did not improve the predictive accuracy of standard predictors for either disease recurrence or cancer-specific death in any of the subgroups. Conclusions: We could not confirm the prognostic value of concomitant CIS in RC specimens. This, together with the discrepancy between pathologists in determining the presence of concomitant CIS at the morphologic level, limits the clinical utility of concomitant CIS in RC specimens for clinical decision-making. Copyright (C) 2011 S. Karger AG, Base
Schr\"{o}dinger Fields on the Plane with Chern-Simons Interactions and Generalized Self-dual Solitons
A general non-relativistic field theory on the plane with couplings to an
arbitrary number of abelian Chern-Simons gauge fields is considered. Elementary
excitations of the system are shown to exhibit fractional and mutual
statistics. We identify the self-dual systems for which certain classical and
quantal aspects of the theory can be studied in a much simplified mathematical
setting. Then, specializing to the general self-dual system with two
Chern-Simons gauge fields (and non-vanishing mutual statistics parameter), we
present a systematic analysis for the static vortexlike classical solutions,
with or without uniform background magnetic field. Relativistic generalizations
are also discussed briefly.Comment: 49 pages including 4 figures, LATEX ( three LATEX figures and one
PICTEX figure), SNUTP 93-14, UMN-TH-113
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