CCRS proposal for evaluating LANDSAT-D MSS and TM data

Accomplishments in the evaluation of LANDSAT 4 data are reported. The objectives of the Canadian proposal are: (1) to quantify the LANDSAT-4 sensors and system performance for the purpose of updating the radiometric and geometric correction algorithms for MSS and for developing and evaluating new correction algorithms to be used for TM data processing; (2) to compare and access the degree to which LANDSAT-4 MSS data can be integrated with MSS imagery acquired from earlier LANDSAT missions; and (3) to apply image analysis and information extraction techniques for specific user applications such as forestry or agriculture

Evaluating LANDSAT-4 MSS and TM data

Interband line pixel misregistrations were determined for the four MSS bands of the Mistassini, Ontario scene and multitemporal registration of LANDSAT-4 products were tested for two different geocoded scenes. Line and pixel misregistrations are tabulated as determined by the manual ground control points and the digital band to band correlation techniques. A method was developed for determining the spectral information content of TM images for forestry applications

CCRS proposal for evaluating LANDSAT-4 MSS and TM data

The measurement of registration errors in LANDSAT MSS data is discussed as well as the development of a revised algorithm for the radiometric calibration of TM data and the production of a geocoded TM image

Relativistic BB84, relativistic errors, and how to correct them

The Bennett-Brassard cryptographic scheme (BB84) needs two bases, at least one of them linearly polarized. The problem is that linear polarization formulated in terms of helicities is not a relativistically covariant notion: State which is linearly polarized in one reference frame becomes depolarized in another one. We show that a relativistically moving receiver of information should define linear polarization with respect to projection of Pauli-Lubanski's vector in a principal null direction of the Lorentz transformation which defines the motion, and not with respect to the helicity basis. Such qubits do not depolarize.Comment: revtex

Comparative interactomes of HSF1 in stress and disease reveal a role for CTCF in HSF1-mediated gene regulation

Heat shock transcription factor 1 (HSF1) orchestrates cellular stress protection by activating or repressing gene transcription in response to protein misfolding, oncogenic cell proliferation, and other environmental stresses. HSF1 is tightly regulated via intramolecular repressive interactions, post-ranslational modifications, and protein-protein interactions. How these HSF1 regulatory protein interactions are altered in response to acute and chronic stress is largely unknown. To elucidate the profile of HSF1 protein interactions under normal growth and chronic and acutely stressful conditions, quantitative proteomics studies identified interacting proteins in the response to heat shock or in the presence of a poly-glutamine aggregation protein cell-based model of Huntington's disease. These studies identified distinct protein interaction partners of HSF1 as well as changes in the magnitude of shared interactions as a function of each stressful condition. Several novel HSF1-interacting proteins were identified that encompass a wide variety of cellular functions, including roles in DNA repair, mRNA processing, and regulation of RNA polymerase II. One HSF1 partner, CTCF, interacted with HSF1 in a stress-inducible manner and functions in repression of specific HSF1 target genes. Understanding how HSF1 regulates gene repression is a crucial question, given the dysregulation of HSF1 target genes in both cancer and neurodegeneration. These studies expand our understanding of HSF1-mediated gene repression and provide key insights into HSF1 regulation via protein-protein interactions.Peer reviewe

Growth of Lactobacillus reuteri NCIMB 30242 during yogurt fermentation and bile salt hydrolysis activity in the product

International audienceAbstractThe synthesis of bile salt hydrolase has been linked to the health benefit of Lactobacillus reuteri toward lowering blood cholesterol. The aim of this study was to examine the growth and bile salt hydrolysis activity (BSHA) of L. reuteri NCIMB 30242 during milk fermentation with a yogurt starter. There was little growth of L. reuteri during a 4-h co-fermentation with a yogurt culture, and an inoculation of 4.5 × 107 CFU.mL−1 was needed to obtain the 108 CFU.mL−1 target in the product. Enrichment of milk with sugars, minerals, or peptone-based ingredients did not improve growth of L. reuteri. Viable counts of L. reuteri above 1.5 × 108 CFU.mL−1 generated texture defects. Free and microencapsulated (ME) cultures were tested for BSHA in the yogurt drinks. L. reuteri cells which grew during the 4-h lactic fermentation had 40% less BSHA than L. reuteri added directly via the commercial culture. The BSHA of free cells was apparently three times higher than in the ME culture. This study adds data showing that the yogurt production process could affect the functionality of probiotic bacteria

GAGA Factor Maintains Nucleosome-Free Regions and Has a Role in RNA Polymerase II Recruitment to Promoters

Previous studies have shown that GAGA Factor (GAF) is enriched on promoters with paused RNA Polymerase II (Pol II), but its genome-wide function and mechanism of action remain largely uncharacterized. We assayed the levels of transcriptionally-engaged polymerase using global run-on sequencing (GRO-seq) in control and GAF-RNAi Drosophila S2 cells and found promoter-proximal polymerase was significantly reduced on a large subset of paused promoters where GAF occupancy was reduced by knock down. These promoters show a dramatic increase in nucleosome occupancy upon GAF depletion. These results, in conjunction with previous studies showing that GAF directly interacts with nucleosome remodelers, strongly support a model where GAF directs nucleosome displacement at the promoter and thereby allows the entry Pol II to the promoter and pause sites. This action of GAF on nucleosomes is at least partially independent of paused Pol II because intergenic GAF binding sites with little or no Pol II also show GAF-dependent nucleosome displacement. In addition, the insulator factor BEAF, the BEAF-interacting protein Chriz, and the transcription factor M1BP are strikingly enriched on those GAF-associated genes where pausing is unaffected by knock down, suggesting insulators or the alternative promoter-associated factor M1BP protect a subset of GAF-bound paused genes from GAF knock-down effects. Thus, GAF binding at promoters can lead to the local displacement of nucleosomes, but this activity can be restricted or compensated for when insulator protein or M1BP complexes also reside at GAF bound promoters

Magnetization and Magnetotransport of LnBaCo2O5.5 (Ln=Gd, Eu) Single Crystals

The magnetization, resistivity and magnetoresistance (MR) of single crystals of GdBaCo2O5.5 and EuBaCo2O5.5 are measured over a wide range of dc magnetic fields (up to 30 T) and temperature. In LnBaCo2O5.5 (Ln=Gd, Eu), the Co-ions are trivalent and can exist in three spin states, namely, the S=0 low spin state (LS), the S= 1 intermediate spin state (IS) and the S=2 high spin state (HS). We confirm that GdBaCo2O5.5 and EuBaCo2O5.5 have a metal-insulator transition accompanied by a spin-state transition at TMI >> 365 and 335 K, respectively. The data suggest an equal ratio of LS (S=0) and IS (S=1) Co3+ ions below TMI, with no indication of additional spin state transitions. The low field magnetization shows a transition to a highly anisotropic ferromagnetic phase at 270 K, followed by another magnetic transition to an antiferromagnetic phase at a slightly lower temperature. The magnetization data are suggestive of weak correlations between the Gd-spins but no clear signature of ordering is seen for T > 2 K. Significant anisotropy between the a-b plane and c axis was observed in magnetic and magnetotransport properties for both compounds. For GdBaCo2O5.5, the resistivity and MR data imply a strong correlation between the spin-order and charge carriers. For EuBaCo2O5.5, the magnetic phase diagram is very similar to its Gd counterpart, but the low-T MR with current flow in the ab plane is positive rather than negative as for Gd. The magnitude and the hysteresis of the MR for EuBaCo2O5.5 decrease with increasing temperature, and at higher T the MR changes sign and becomes negative. The difference in the behavior of both compounds may arise from a small valence admixture in the nonmagnetic Eu ions, i.e. a valence slightly less than 3+.Comment: Accepted for publication in PR

Foldy-Wouthuysen transformation for relativistic particles in external fields

A method of Foldy-Wouthuysen transformation for relativistic spin-1/2 particles in external fields is proposed. It permits determination of the Hamilton operator in the Foldy-Wouthuysen representation with any accuracy. Interactions between a particle having an anomalous magnetic moment and nonstationary electromagnetic and electroweak fields are investigated.Comment: 22 page